RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, human

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCARB2-223	ENST00000640640	RASA4B	C9J798	803 aa		18.7	■□□□□ 0.58
SCARB2-223	ENST00000640640	SMIM22	K7EJ46	135 aa		18.7	■□□□□ 0.58
SCARB2-223	ENST00000640640	RASA4	O43374	803 aa		18.7	■□□□□ 0.58
SCARB2-223	ENST00000640640	GSTA1	P08263	222 aa		18.7	■□□□□ 0.58
SCARB2-223	ENST00000640640	GSTA2	P09210	222 aa		18.7	■□□□□ 0.58
SCARB2-223	ENST00000640640	FAM102A	Q5T9C2	384 aa	Predicted RBP	18.7	■□□□□ 0.58
SCARB2-223	ENST00000640640	SRRM1	Q8IYB3	904 aa	Known RBP	18.7	■□□□□ 0.58
SCARB2-223	ENST00000640640	CFAP36	Q96G28	342 aa		18.7	■□□□□ 0.58
SCARB2-223	ENST00000640640	SARS	P49591	514 aa	Known RBP	18.7	■□□□□ 0.58
SCARB2-223	ENST00000640640	FIGN	Q5HY92	759 aa		18.7	■□□□□ 0.58
SCARB2-223	ENST00000640640	CCNI2	Q6ZMN8	369 aa	Predicted RBP	18.7	■□□□□ 0.58
SCARB2-223	ENST00000640640	GCOM2	Q9BZD3	368 aa	Predicted RBP	18.7	■□□□□ 0.58
SCARB2-223	ENST00000640640	RBM12	Q9NTZ6	932 aa	Known RBP	18.7	■□□□□ 0.58
SCARB2-223	ENST00000640640	SMARCAL1	Q9NZC9	954 aa		18.7	■□□□□ 0.58
SCARB2-223	ENST00000640640	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	18.7	■□□□□ 0.58
SCARB2-223	ENST00000640640	BCAP29	Q9UHQ4	241 aa		18.7	■□□□□ 0.58
SCARB2-223	ENST00000640640	SLC12A6	Q9UHW9	1150 aa		18.7	■□□□□ 0.58
SCARB2-223	ENST00000640640	IQANK1	A0A1B0GTG1	560 aa		18.7	■□□□□ 0.58
SCARB2-223	ENST00000640640	POLRMT	O00411	1230 aa	Known RBP	18.7	■□□□□ 0.58
SCARB2-223	ENST00000640640	UNC45A	Q9H3U1	944 aa		18.7	■□□□□ 0.58
SCARB2-223	ENST00000640640	UBR1	Q8IWV7	1749 aa		18.7	■□□□□ 0.58
SCARB2-223	ENST00000640640	RIC1	Q4ADV7	1423 aa		18.7	■□□□□ 0.58
SCARB2-223	ENST00000640640	NCOA4	Q13772	614 aa		18.7	■□□□□ 0.58
SCARB2-223	ENST00000640640	ELAC2	Q9BQ52	826 aa	Known RBP	18.7	■□□□□ 0.58
SCARB2-223	ENST00000640640	HACL1	Q9UJ83	578 aa		18.7	■□□□□ 0.58
SCARB2-223	ENST00000640640	ABT1	Q9ULW3	272 aa	Known RBP	18.7	■□□□□ 0.58
SCARB2-223	ENST00000640640	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	18.7	■□□□□ 0.58
SCARB2-223	ENST00000640640		A0A087X0T9	212 aa		18.69	■□□□□ 0.58
SCARB2-223	ENST00000640640	GOLGA8M	H3BSY2	632 aa		18.69	■□□□□ 0.58
SCARB2-223	ENST00000640640	CYTH3	O43739	400 aa		18.69	■□□□□ 0.58
SCARB2-223	ENST00000640640	KRT37	O76014	449 aa		18.69	■□□□□ 0.58
SCARB2-223	ENST00000640640	FAM228B	P0C875	321 aa		18.69	■□□□□ 0.58
SCARB2-223	ENST00000640640	ARPP19	P56211	112 aa		18.69	■□□□□ 0.58
SCARB2-223	ENST00000640640	IGSF9B	Q9UPX0	1349 aa		18.69	■□□□□ 0.58
SCARB2-223	ENST00000640640	ANKRD65	E5RJM6	399 aa		18.69	■□□□□ 0.58
SCARB2-223	ENST00000640640	PFDN6	O15212	129 aa		18.69	■□□□□ 0.58
SCARB2-223	ENST00000640640	PHLDB3	Q6NSJ2	640 aa		18.69	■□□□□ 0.58
SCARB2-223	ENST00000640640	KIF12	Q96FN5	646 aa		18.69	■□□□□ 0.58
SCARB2-223	ENST00000640640	LRFN2	Q9ULH4	789 aa		18.69	■□□□□ 0.58
SCARB2-223	ENST00000640640	AR	P10275	920 aa		18.69	■□□□□ 0.58
SCARB2-223	ENST00000640640	GPS1	Q13098	491 aa		18.69	■□□□□ 0.58
SCARB2-223	ENST00000640640	FAM133B	Q5BKY9	247 aa	Known RBP	18.69	■□□□□ 0.58
SCARB2-223	ENST00000640640	ATP6V1G3	Q96LB4	118 aa		18.69	■□□□□ 0.58
SCARB2-223	ENST00000640640	DDX4	Q9NQI0	724 aa	Known RBP	18.69	■□□□□ 0.58
SCARB2-223	ENST00000640640	TXNDC9	O14530	226 aa		18.69	■□□□□ 0.58
SCARB2-223	ENST00000640640	P4HA2	O15460	535 aa		18.69	■□□□□ 0.58
SCARB2-223	ENST00000640640	TTI1	O43156	1089 aa		18.69	■□□□□ 0.58
SCARB2-223	ENST00000640640	SLC8A1	P32418	973 aa		18.69	■□□□□ 0.58
SCARB2-223	ENST00000640640	ASPH	Q12797	758 aa		18.69	■□□□□ 0.58
SCARB2-223	ENST00000640640	ARHGEF6	Q15052	776 aa		18.69	■□□□□ 0.58
SCARB2-223	ENST00000640640	NT5DC1	Q5TFE4	455 aa		18.69	■□□□□ 0.58
SCARB2-223	ENST00000640640	SCYL3	Q8IZE3	742 aa		18.69	■□□□□ 0.58
SCARB2-223	ENST00000640640	GMCL1P1	Q8NEA9	526 aa		18.69	■□□□□ 0.58
SCARB2-223	ENST00000640640	RUBCN	Q92622	972 aa		18.69	■□□□□ 0.58
SCARB2-223	ENST00000640640	TMEM8A	Q9HCN3	771 aa		18.69	■□□□□ 0.58
SCARB2-223	ENST00000640640	TLK1	Q9UKI8	766 aa		18.69	■□□□□ 0.58
SCARB2-223	ENST00000640640	ATP8B3	O60423	1300 aa		18.68	■□□□□ 0.58
SCARB2-223	ENST00000640640	LPXN	O60711	386 aa		18.68	■□□□□ 0.58
SCARB2-223	ENST00000640640	TMEM253	P0C7T8	217 aa		18.68	■□□□□ 0.58
SCARB2-223	ENST00000640640	SLC1A1	P43005	524 aa		18.68	■□□□□ 0.58
SCARB2-223	ENST00000640640	GIT2	Q14161	759 aa		18.68	■□□□□ 0.58
SCARB2-223	ENST00000640640	RCN2	Q14257	317 aa		18.68	■□□□□ 0.58
SCARB2-223	ENST00000640640	KIAA1841	Q6NSI8	718 aa		18.68	■□□□□ 0.58
SCARB2-223	ENST00000640640	GJB7	Q6PEY0	223 aa		18.68	■□□□□ 0.58
SCARB2-223	ENST00000640640	CPA5	Q8WXQ8	436 aa		18.68	■□□□□ 0.58
SCARB2-223	ENST00000640640	GOLPH3	Q9H4A6	298 aa		18.68	■□□□□ 0.58
SCARB2-223	ENST00000640640	SMARCAD1	Q9H4L7	1026 aa		18.68	■□□□□ 0.58
SCARB2-223	ENST00000640640	PCDHB2	Q9Y5E7	798 aa		18.68	■□□□□ 0.58
SCARB2-223	ENST00000640640	GPC4	O75487	556 aa		18.68	■□□□□ 0.58
SCARB2-223	ENST00000640640	KRT14	P02533	472 aa		18.68	■□□□□ 0.58
SCARB2-223	ENST00000640640	PPP2R2A	P63151	447 aa		18.68	■□□□□ 0.58
SCARB2-223	ENST00000640640	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	18.68	■□□□□ 0.58
SCARB2-223	ENST00000640640	NAGPA	Q9UK23	515 aa		18.68	■□□□□ 0.58
SCARB2-223	ENST00000640640	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	18.68	■□□□□ 0.58
SCARB2-223	ENST00000640640	SH3BP5	O60239	455 aa		18.68	■□□□□ 0.58
SCARB2-223	ENST00000640640	HOXA10	P31260	410 aa	Predicted RBP	18.68	■□□□□ 0.58
SCARB2-223	ENST00000640640	BCAR1	P56945	870 aa		18.68	■□□□□ 0.58
SCARB2-223	ENST00000640640	SNRPF	P62306	86 aa	Known RBP	18.68	■□□□□ 0.58
SCARB2-223	ENST00000640640	PLCD3	Q8N3E9	789 aa		18.68	■□□□□ 0.58
SCARB2-223	ENST00000640640	TTC25	Q96NG3	672 aa		18.68	■□□□□ 0.58
SCARB2-223	ENST00000640640	TACC3	Q9Y6A5	838 aa		18.68	■□□□□ 0.58
SCARB2-223	ENST00000640640		A0A087X0B3	334 aa		18.67	■□□□□ 0.58
SCARB2-223	ENST00000640640		A8MXQ7	604 aa		18.67	■□□□□ 0.58
SCARB2-223	ENST00000640640	KIAA1755	Q5JYT7	1200 aa		18.67	■□□□□ 0.58
SCARB2-223	ENST00000640640	RDM1	Q8NG50	284 aa		18.67	■□□□□ 0.58
SCARB2-223	ENST00000640640	PITPNM3	Q9BZ71	974 aa		18.67	■□□□□ 0.58
SCARB2-223	ENST00000640640	VCX	Q9H320	206 aa		18.67	■□□□□ 0.58
SCARB2-223	ENST00000640640	VIPAS39	Q9H9C1	493 aa		18.67	■□□□□ 0.58
SCARB2-223	ENST00000640640	CAMTA1	Q9Y6Y1	1673 aa		18.67	■□□□□ 0.58
SCARB2-223	ENST00000640640	ANKRD26	Q9UPS8	1709 aa		18.67	■□□□□ 0.58
SCARB2-223	ENST00000640640	IQCA1L	A6NCM1	817 aa		18.67	■□□□□ 0.58
SCARB2-223	ENST00000640640	SPARCL1	Q14515	664 aa		18.67	■□□□□ 0.58
SCARB2-223	ENST00000640640	SNCB	Q16143	134 aa		18.67	■□□□□ 0.58
SCARB2-223	ENST00000640640	MAP3K21	Q5TCX8	1036 aa		18.67	■□□□□ 0.58
SCARB2-223	ENST00000640640	TRIM65	Q6PJ69	517 aa		18.67	■□□□□ 0.58
SCARB2-223	ENST00000640640	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	18.67	■□□□□ 0.58
SCARB2-223	ENST00000640640	ZKSCAN4	Q969J2	545 aa	Predicted RBP	18.67	■□□□□ 0.58
SCARB2-223	ENST00000640640	GPRASP2	Q96D09	838 aa		18.67	■□□□□ 0.58
SCARB2-223	ENST00000640640	SPON1	Q9HCB6	807 aa		18.67	■□□□□ 0.58
SCARB2-223	ENST00000640640	CPSF3	Q9UKF6	684 aa	Known RBP	18.67	■□□□□ 0.58

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