RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 CALUO43852 315 aaPredicted RBP6.09□□□□□ -1.43
RTTN-218ENST00000640408 HNRNPH1P31943 449 aaKnown RBP6.09□□□□□ -1.43
RTTN-218ENST00000640408 SLC8A3P57103 927 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 PRKCEQ02156 737 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 MFSD10Q14728 455 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 SLC44A4Q53GD3 710 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 FAM102BQ5T8I3 360 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 ALS2CLQ60I27 953 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 TMEM199Q8N511 208 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 U2AF1L4Q8WU68 220 aaKnown RBP6.09□□□□□ -1.43
RTTN-218ENST00000640408 TBC1D5Q92609 795 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 DPF3Q92784 378 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 MBOAT7Q96N66 472 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 PARD6BQ9BYG5 372 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 NUF2Q9BZD4 464 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 BHMT2Q9H2M3 363 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 METTL14Q9HCE5 456 aaKnown RBP6.09□□□□□ -1.43
RTTN-218ENST00000640408 TXLNGQ9NUQ3 528 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 TUBE1Q9UJT0 475 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 FRMD4BQ9Y2L6 1034 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 PPP2R2CQ9Y2T4 447 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 RBM47A0AV96 593 aaKnown RBP6.09□□□□□ -1.43
RTTN-218ENST00000640408 CCDC85CA6NKD9 419 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 DNM1LO00429 736 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 GPR182O15218 404 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 SUN1O94901 812 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 INAQ16352 499 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 NFRKBQ6P4R8 1299 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 ARHGAP22Q7Z5H3 698 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 ZNF410Q86VK4 478 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 EGFL6Q8IUX8 553 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 EMID1Q96A84 441 aaPredicted RBP6.09□□□□□ -1.43
RTTN-218ENST00000640408 FAM193BQ96PV7 902 aaPredicted RBP6.09□□□□□ -1.43
RTTN-218ENST00000640408 RPS6KC1Q96S38 1066 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 PLVAPQ9BX97 442 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 KMT5AQ9NQR1 393 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 G3BP2Q9UN86 482 aaKnown RBP6.09□□□□□ -1.43
RTTN-218ENST00000640408 ZNF202O95125 648 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 GNA14O95837 355 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 LGALS2P05162 132 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 CST5P28325 142 aaPredicted RBP6.09□□□□□ -1.43
RTTN-218ENST00000640408 DDIT3P35638 169 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 ATP1A2P50993 1020 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 TPD52P55327 224 aaPredicted RBP6.09□□□□□ -1.43
RTTN-218ENST00000640408 ACTN3Q08043 901 aaPredicted RBP6.09□□□□□ -1.43
RTTN-218ENST00000640408 MYLK4Q86YV6 388 aaPredicted RBP6.09□□□□□ -1.43
RTTN-218ENST00000640408 ACCSQ96QU6 501 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 FTOQ9C0B1 505 aaKnown RBP eCLIP6.09□□□□□ -1.43
RTTN-218ENST00000640408 FAM49AQ9H0Q0 323 aaPredicted RBP6.09□□□□□ -1.43
RTTN-218ENST00000640408 TLDC2A0PJX2 215 aa6.09□□□□□ -1.44
RTTN-218ENST00000640408 FOXN1O15353 648 aa6.09□□□□□ -1.44
RTTN-218ENST00000640408 PAX3P23760 479 aa6.09□□□□□ -1.44
RTTN-218ENST00000640408 NOP2P46087 812 aaKnown RBP6.09□□□□□ -1.44
RTTN-218ENST00000640408 CLK2P49760 499 aaKnown RBP6.09□□□□□ -1.44
RTTN-218ENST00000640408 LIG4P49917 911 aa6.09□□□□□ -1.44
RTTN-218ENST00000640408 BLVRAP53004 296 aa6.09□□□□□ -1.44
RTTN-218ENST00000640408 HTRA3P83110 453 aa6.09□□□□□ -1.44
RTTN-218ENST00000640408 LRMPQ12912 555 aa6.09□□□□□ -1.44
RTTN-218ENST00000640408 PLCB4Q15147 1175 aa6.09□□□□□ -1.44
RTTN-218ENST00000640408 CLUL1Q15846 466 aa6.09□□□□□ -1.44
RTTN-218ENST00000640408 KIAA1755Q5JYT7 1200 aa6.09□□□□□ -1.44
RTTN-218ENST00000640408 PPP4R3CPQ6ZMV5 832 aa6.09□□□□□ -1.44
RTTN-218ENST00000640408 MFN1Q8IWA4 741 aa6.09□□□□□ -1.44
RTTN-218ENST00000640408 TRIM42Q8IWZ5 723 aa6.09□□□□□ -1.44
RTTN-218ENST00000640408 NLRP7Q8WX94 980 aa6.09□□□□□ -1.44
RTTN-218ENST00000640408 JAKMIP2Q96AA8 810 aa6.09□□□□□ -1.44
RTTN-218ENST00000640408 ZBTB10Q96DT7 871 aa6.09□□□□□ -1.44
RTTN-218ENST00000640408 DYDC2Q96IM9 177 aa6.09□□□□□ -1.44
RTTN-218ENST00000640408 FNBP1Q96RU3 617 aa6.09□□□□□ -1.44
RTTN-218ENST00000640408 FTHL17Q9BXU8 183 aa6.09□□□□□ -1.44
RTTN-218ENST00000640408 CNOT10Q9H9A5 744 aaKnown RBP6.09□□□□□ -1.44
RTTN-218ENST00000640408 TMEM39AQ9NV64 488 aa6.09□□□□□ -1.44
RTTN-218ENST00000640408 TBC1D7Q9P0N9 293 aa6.09□□□□□ -1.44
RTTN-218ENST00000640408 CDC23Q9UJX2 597 aa6.09□□□□□ -1.44
RTTN-218ENST00000640408 GJD2Q9UKL4 321 aa6.09□□□□□ -1.44
RTTN-218ENST00000640408 PCDHA7Q9UN72 937 aa6.09□□□□□ -1.44
RTTN-218ENST00000640408 SSC5DA1L4H1 1573 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 DYTNA2CJ06 578 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 ARP10275 920 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 ITGB5P18084 799 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 AXLP30530 894 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 YWHABP31946 246 aaKnown RBP6.08□□□□□ -1.44
RTTN-218ENST00000640408 HIBCHQ6NVY1 386 aaPredicted RBP6.08□□□□□ -1.44
RTTN-218ENST00000640408 FAM81BQ96LP2 452 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 C11orf49Q9H6J7 331 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 BAZ2AQ9UIF9 1905 aaKnown RBP6.08□□□□□ -1.44
RTTN-218ENST00000640408 DOCK2Q92608 1830 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 ZRANB2O95218 330 aaKnown RBP eCLIP6.08□□□□□ -1.44
RTTN-218ENST00000640408 PFKMP08237 780 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 AFMP43652 599 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 RAB27AP51159 221 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 ACLYP53396 1101 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 RNASELQ05823 741 aaKnown RBP6.08□□□□□ -1.44
RTTN-218ENST00000640408 CACNB2Q08289 660 aaPredicted RBP6.08□□□□□ -1.44
RTTN-218ENST00000640408 CASP8Q14790 479 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 MYOCDQ8IZQ8 938 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 C17orf50Q8WW18 174 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 SYMPKQ92797 1274 aaKnown RBP6.08□□□□□ -1.44
RTTN-218ENST00000640408 MRPL44Q9H9J2 332 aaKnown RBP6.08□□□□□ -1.44
RTTN-218ENST00000640408 KCNMB3Q9NPA1 279 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms