RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	ATF7IP2	Q5U623	682 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	CCSAP	Q6IQ19	270 aa	Predicted RBP	11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	NEK11	Q8NG66	645 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	PARD3B	Q8TEW8	1205 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	MFSD14A	Q96MC6	490 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	PANX2	Q96RD6	677 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	NFKBIZ	Q9BYH8	718 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	HMX1	Q9NP08	348 aa	Predicted RBP	11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	TOPORS	Q9NS56	1045 aa	Predicted RBP	11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	KAT6A	Q92794	2004 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	SOWAHD	A6NJG2	315 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	LRRIQ3	A6PVS8	624 aa	Predicted RBP	11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	MAPK13	O15264	365 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	TNFSF9	P41273	254 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	CYP24A1	Q07973	514 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	AMHR2	Q16671	573 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	EEF1DP3	Q658K8	133 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	LMBRD2	Q68DH5	695 aa	Predicted RBP	11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	GDF6	Q6KF10	455 aa	Predicted RBP	11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	GBP6	Q6ZN66	633 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	TSHZ1	Q6ZSZ6	1077 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	THNSL1	Q8IYQ7	743 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	SLAIN1	Q8ND83	568 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	OR8K1	Q8NGG5	319 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	OSMR	Q99650	979 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	ADAMTS10	Q9H324	1103 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	PDE11A	Q9HCR9	933 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	PTPRH	Q9HD43	1115 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	RRAGD	Q9NQL2	400 aa	Predicted RBP	11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	GCNT4	Q9P109	453 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	ABLIM1	O14639	778 aa		11.37	□□□□□ -0.59
NECAP1-223	ENST00000640091	GNAT1	P11488	350 aa		11.37	□□□□□ -0.59
NECAP1-223	ENST00000640091	NKX3-2	P78367	333 aa		11.37	□□□□□ -0.59
NECAP1-223	ENST00000640091	ZBED6	P86452	979 aa		11.37	□□□□□ -0.59
NECAP1-223	ENST00000640091	MTF1	Q14872	753 aa		11.37	□□□□□ -0.59
NECAP1-223	ENST00000640091	FIGN	Q5HY92	759 aa		11.37	□□□□□ -0.59
NECAP1-223	ENST00000640091	LHX8	Q68G74	356 aa		11.37	□□□□□ -0.59
NECAP1-223	ENST00000640091	DPY19L2P1	Q6NXN4	242 aa		11.37	□□□□□ -0.59
NECAP1-223	ENST00000640091	GJB7	Q6PEY0	223 aa		11.37	□□□□□ -0.59
NECAP1-223	ENST00000640091	RRAGA	Q7L523	313 aa		11.37	□□□□□ -0.59
NECAP1-223	ENST00000640091	CACNA2D4	Q7Z3S7	1137 aa		11.37	□□□□□ -0.59
NECAP1-223	ENST00000640091	CEP120	Q8N960	986 aa		11.37	□□□□□ -0.59
NECAP1-223	ENST00000640091	CHP1	Q99653	195 aa		11.37	□□□□□ -0.59
NECAP1-223	ENST00000640091	TMEM117	Q9H0C3	514 aa		11.37	□□□□□ -0.59
NECAP1-223	ENST00000640091	PRMT7	Q9NVM4	692 aa	Predicted RBP	11.37	□□□□□ -0.59
NECAP1-223	ENST00000640091	GTF2IRD1	Q9UHL9	959 aa		11.37	□□□□□ -0.59
NECAP1-223	ENST00000640091	GRIN2D	O15399	1336 aa		11.37	□□□□□ -0.59
NECAP1-223	ENST00000640091	CASP8AP2	Q9UKL3	1982 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	FAM189A1	O60320	539 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	STX10	O60499	249 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	LDHA	P00338	332 aa	Known RBP	11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	ARF4	P18085	180 aa	Predicted RBP	11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	HOXC8	P31273	242 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	ZNF568	Q3ZCX4	644 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	WDR59	Q6PJI9	974 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	MPZL3	Q6UWV2	235 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	RNF180	Q86T96	592 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	ZNF410	Q86VK4	478 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	PCSK9	Q8NBP7	692 aa	Known RBP	11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	CCDC112	Q8NEF3	446 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	ZNF397	Q8NF99	534 aa	Predicted RBP	11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	TMEM40	Q8WWA1	233 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	ELMO3	Q96BJ8	720 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	FAM212A	Q96EL1	285 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	DNAJC7	Q99615	494 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	KIAA1586	Q9HCI6	787 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	WBP1L	Q9NX94	342 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	TRMT1	Q9NXH9	659 aa	Known RBP	11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	RBAK	Q9NYW8	714 aa	Predicted RBP	11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091		A0A1W2PQJ5	194 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	LRRC53	A6NM62	1247 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	USP27X	A6NNY8	438 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	NRDC	O43847	1150 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	ERLIN2	O94905	339 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	UCHL3	P15374	230 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	TNNI1	P19237	187 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	PROZ	P22891	400 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	C1QTNF8	P60827	252 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	MYL7	Q01449	175 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	MCL1	Q07820	350 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	TSR1	Q2NL82	804 aa	Known RBP	11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	KLHDC7A	Q5VTJ3	777 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	E4F1	Q66K89	784 aa	Predicted RBP	11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	TRIM65	Q6PJ69	517 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	TMEM192	Q8IY95	271 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	BAP1	Q92560	729 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	ZNF516	Q92618	1163 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	WNT8B	Q93098	351 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	CCDC51	Q96ER9	411 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	GCOM2	Q9BZD3	368 aa	Predicted RBP	11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	SIX2	Q9NPC8	291 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	TNFSF13B	Q9Y275	285 aa		11.36	□□□□□ -0.59
NECAP1-223	ENST00000640091	GTPBP10	A4D1E9	387 aa	Known RBP	11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	KIAA0391	O15091	583 aa	Known RBP	11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	TSPAN1	O60635	241 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	CST5	P28325	142 aa	Predicted RBP	11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	ACLY	P53396	1101 aa		11.35	□□□□□ -0.59
NECAP1-223	ENST00000640091	PRMT2	P55345	433 aa		11.35	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 52 ms