RNA–Protein interactions for RNA: ENST00000640039.1

SPIN3-233, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-233ENST00000640039 EEF1DP3Q658K8 133 aa17.38■□□□□ 0.37
SPIN3-233ENST00000640039 LRRC55Q6ZSA7 311 aa17.38■□□□□ 0.37
SPIN3-233ENST00000640039 SFR1Q86XK3 245 aa17.38■□□□□ 0.37
SPIN3-233ENST00000640039 CCDC65Q8IXS2 484 aa17.38■□□□□ 0.37
SPIN3-233ENST00000640039 STAMQ92783 540 aa17.38■□□□□ 0.37
SPIN3-233ENST00000640039 RPS6KC1Q96S38 1066 aa17.38■□□□□ 0.37
SPIN3-233ENST00000640039 GDPD2Q9HCC8 539 aa17.38■□□□□ 0.37
SPIN3-233ENST00000640039 TBC1D13Q9NVG8 400 aa17.38■□□□□ 0.37
SPIN3-233ENST00000640039 KBTBD4Q9NVX7 518 aa17.38■□□□□ 0.37
SPIN3-233ENST00000640039 LMCD1Q9NZU5 365 aa17.38■□□□□ 0.37
SPIN3-233ENST00000640039 MTCH2Q9Y6C9 303 aa17.38■□□□□ 0.37
SPIN3-233ENST00000640039 NCOR1O75376 2440 aa17.37■□□□□ 0.37
SPIN3-233ENST00000640039 A0A1B0GVL5 298 aa17.37■□□□□ 0.37
SPIN3-233ENST00000640039 ZC3H11AO75152 810 aaKnown RBP eCLIP17.37■□□□□ 0.37
SPIN3-233ENST00000640039 PFKFB1P16118 471 aa17.37■□□□□ 0.37
SPIN3-233ENST00000640039 POU3F3P20264 500 aaPredicted RBP17.37■□□□□ 0.37
SPIN3-233ENST00000640039 AKAP5P24588 427 aa17.37■□□□□ 0.37
SPIN3-233ENST00000640039 PPM1AP35813 382 aa17.37■□□□□ 0.37
SPIN3-233ENST00000640039 MLH1P40692 756 aa17.37■□□□□ 0.37
SPIN3-233ENST00000640039 MATR3P43243 847 aaKnown RBP eCLIP17.37■□□□□ 0.37
SPIN3-233ENST00000640039 ALDH7A1P49419 539 aaKnown RBP17.37■□□□□ 0.37
SPIN3-233ENST00000640039 KCNT2Q6UVM3 1135 aa17.37■□□□□ 0.37
SPIN3-233ENST00000640039 KLHL23Q8NBE8 558 aa17.37■□□□□ 0.37
SPIN3-233ENST00000640039 PPM1EQ8WY54 764 aa17.37■□□□□ 0.37
SPIN3-233ENST00000640039 DNAJC19Q96DA6 116 aa17.37■□□□□ 0.37
SPIN3-233ENST00000640039 MRPL38Q96DV4 380 aaKnown RBP17.37■□□□□ 0.37
SPIN3-233ENST00000640039 GAD1Q99259 594 aa17.37■□□□□ 0.37
SPIN3-233ENST00000640039 GBP3Q9H0R5 595 aa17.37■□□□□ 0.37
SPIN3-233ENST00000640039 LMAN2LQ9H0V9 348 aa17.37■□□□□ 0.37
SPIN3-233ENST00000640039 RNF39Q9H2S5 420 aa17.37■□□□□ 0.37
SPIN3-233ENST00000640039 MRPL44Q9H9J2 332 aaKnown RBP17.37■□□□□ 0.37
SPIN3-233ENST00000640039 PANK4Q9NVE7 773 aa17.37■□□□□ 0.37
SPIN3-233ENST00000640039 ANKFY1Q9P2R3 1169 aa17.37■□□□□ 0.37
SPIN3-233ENST00000640039 TBX20Q9UMR3 447 aa17.37■□□□□ 0.37
SPIN3-233ENST00000640039 ZMYM2Q9UBW7 1377 aa17.37■□□□□ 0.37
SPIN3-233ENST00000640039 GOLGA6L4A6NEF3 574 aa17.36■□□□□ 0.37
SPIN3-233ENST00000640039 ARL5CA6NH57 179 aa17.36■□□□□ 0.37
SPIN3-233ENST00000640039 HNRNPDLO14979 420 aaKnown RBP17.36■□□□□ 0.37
SPIN3-233ENST00000640039 TOM1L1O75674 476 aa17.36■□□□□ 0.37
SPIN3-233ENST00000640039 POMCP01189 267 aa17.36■□□□□ 0.37
SPIN3-233ENST00000640039 NMT1P30419 496 aaKnown RBP17.36■□□□□ 0.37
SPIN3-233ENST00000640039 LIG4P49917 911 aa17.36■□□□□ 0.37
SPIN3-233ENST00000640039 ASIC1P78348 528 aa17.36■□□□□ 0.37
SPIN3-233ENST00000640039 HERC4Q5GLZ8 1057 aaPredicted RBP17.36■□□□□ 0.37
SPIN3-233ENST00000640039 MPZL3Q6UWV2 235 aa17.36■□□□□ 0.37
SPIN3-233ENST00000640039 ZPBP2Q6X784 338 aa17.36■□□□□ 0.37
SPIN3-233ENST00000640039 ZBTB33Q86T24 672 aa17.36■□□□□ 0.37
SPIN3-233ENST00000640039 ATXN2LQ8WWM7 1075 aaKnown RBP17.36■□□□□ 0.37
SPIN3-233ENST00000640039 KCNN1Q92952 543 aa17.36■□□□□ 0.37
SPIN3-233ENST00000640039 TRIM9Q9C026 710 aa17.36■□□□□ 0.37
SPIN3-233ENST00000640039 ALG13Q9NP73 1137 aaKnown RBP17.36■□□□□ 0.37
SPIN3-233ENST00000640039 SNTG2Q9NY99 539 aa17.36■□□□□ 0.37
SPIN3-233ENST00000640039 USP25Q9UHP3 1055 aa17.36■□□□□ 0.37
SPIN3-233ENST00000640039 PLAGL2Q9UPG8 496 aa17.36■□□□□ 0.37
SPIN3-233ENST00000640039 GDAQ9Y2T3 454 aa17.36■□□□□ 0.37
SPIN3-233ENST00000640039 A0A1W2PQ27 194 aa17.35■□□□□ 0.37
SPIN3-233ENST00000640039 A0A1W2PQ64 194 aa17.35■□□□□ 0.37
SPIN3-233ENST00000640039 A0A1W2PQD8 194 aa17.35■□□□□ 0.37
SPIN3-233ENST00000640039 FGF18O76093 207 aa17.35■□□□□ 0.37
SPIN3-233ENST00000640039 RECQL4O94761 1208 aa17.35■□□□□ 0.37
SPIN3-233ENST00000640039 ITGB1P05556 798 aa17.35■□□□□ 0.37
SPIN3-233ENST00000640039 MCF2P10911 925 aa17.35■□□□□ 0.37
SPIN3-233ENST00000640039 HARSP12081 509 aaKnown RBP17.35■□□□□ 0.37
SPIN3-233ENST00000640039 SYKP43405 635 aa17.35■□□□□ 0.37
SPIN3-233ENST00000640039 SCNN1GP51170 649 aa17.35■□□□□ 0.37
SPIN3-233ENST00000640039 YARSP54577 528 aaKnown RBP17.35■□□□□ 0.37
SPIN3-233ENST00000640039 BCAR1P56945 870 aa17.35■□□□□ 0.37
SPIN3-233ENST00000640039 KRT17Q04695 432 aa17.35■□□□□ 0.37
SPIN3-233ENST00000640039 NOLC1Q14978 699 aaKnown RBP eCLIP17.35■□□□□ 0.37
SPIN3-233ENST00000640039 CCDC85BQ15834 202 aaPredicted RBP17.35■□□□□ 0.37
SPIN3-233ENST00000640039 TIGD5Q53EQ6 642 aa17.35■□□□□ 0.37
SPIN3-233ENST00000640039 FSIP1Q8NA03 581 aa17.35■□□□□ 0.37
SPIN3-233ENST00000640039 MRPS27Q92552 414 aaKnown RBP17.35■□□□□ 0.37
SPIN3-233ENST00000640039 HVCN1Q96D96 273 aa17.35■□□□□ 0.37
SPIN3-233ENST00000640039 ZFP42Q96MM3 310 aa17.35■□□□□ 0.37
SPIN3-233ENST00000640039 CCDC94Q9BW85 323 aaPredicted RBP17.35■□□□□ 0.37
SPIN3-233ENST00000640039 CDT1Q9H211 546 aa17.35■□□□□ 0.37
SPIN3-233ENST00000640039 ST6GALNAC4Q9H4F1 302 aa17.35■□□□□ 0.37
SPIN3-233ENST00000640039 NRDE2Q9H7Z3 1164 aa17.35■□□□□ 0.37
SPIN3-233ENST00000640039 SPG21Q9NZD8 308 aa17.35■□□□□ 0.37
SPIN3-233ENST00000640039 KLK14Q9P0G3 267 aa17.35■□□□□ 0.37
SPIN3-233ENST00000640039 TBC1D7Q9P0N9 293 aa17.35■□□□□ 0.37
SPIN3-233ENST00000640039 MUC3AQ02505 3323 aa17.35■□□□□ 0.37
SPIN3-233ENST00000640039 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.34■□□□□ 0.37
SPIN3-233ENST00000640039 FRMD3A2A2Y4 597 aa17.34■□□□□ 0.37
SPIN3-233ENST00000640039 TDRD15B5MCY1 1934 aaKnown RBP17.34■□□□□ 0.37
SPIN3-233ENST00000640039 GRM6O15303 877 aa17.34■□□□□ 0.37
SPIN3-233ENST00000640039 INPPL1O15357 1258 aa17.34■□□□□ 0.37
SPIN3-233ENST00000640039 CLDN3O15551 220 aa17.34■□□□□ 0.37
SPIN3-233ENST00000640039 CSPG5O95196 566 aa17.34■□□□□ 0.37
SPIN3-233ENST00000640039 GCNT3O95395 438 aa17.34■□□□□ 0.37
SPIN3-233ENST00000640039 SLFN14P0C7P3 912 aa17.34■□□□□ 0.37
SPIN3-233ENST00000640039 PROZP22891 400 aa17.34■□□□□ 0.37
SPIN3-233ENST00000640039 PBX3P40426 434 aa17.34■□□□□ 0.37
SPIN3-233ENST00000640039 AFMP43652 599 aa17.34■□□□□ 0.37
SPIN3-233ENST00000640039 GTF2BQ00403 316 aa17.34■□□□□ 0.37
SPIN3-233ENST00000640039 UBE3AQ05086 875 aa17.34■□□□□ 0.37
SPIN3-233ENST00000640039 GRIK3Q13003 919 aa17.34■□□□□ 0.37
SPIN3-233ENST00000640039 COASYQ13057 564 aa17.34■□□□□ 0.37
SPIN3-233ENST00000640039 ALCAMQ13740 583 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms