RNA–Protein interactions for RNA: ENST00000637988.1

SCN1A-217, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-217ENST00000637988 SLC2A3P11169 496 aa6.49□□□□□ -1.37
SCN1A-217ENST00000637988 IMPDH2P12268 514 aa6.49□□□□□ -1.37
SCN1A-217ENST00000637988 JAK1P23458 1154 aa6.49□□□□□ -1.37
SCN1A-217ENST00000637988 SLC11A2P49281 568 aa6.49□□□□□ -1.37
SCN1A-217ENST00000637988 STAT5BP51692 787 aa6.49□□□□□ -1.37
SCN1A-217ENST00000637988 SGCGQ13326 291 aa6.49□□□□□ -1.37
SCN1A-217ENST00000637988 TRIP4Q15650 581 aaPredicted RBP6.49□□□□□ -1.37
SCN1A-217ENST00000637988 FSCBQ5H9T9 825 aa6.49□□□□□ -1.37
SCN1A-217ENST00000637988 FBXO18Q8NFZ0 1043 aa6.49□□□□□ -1.37
SCN1A-217ENST00000637988 SH3RF3Q8TEJ3 882 aaPredicted RBP6.49□□□□□ -1.37
SCN1A-217ENST00000637988 TUBGCP2Q9BSJ2 902 aa6.49□□□□□ -1.37
SCN1A-217ENST00000637988 MTFR1LQ9H019 292 aa6.49□□□□□ -1.37
SCN1A-217ENST00000637988 YY1AP1Q9H869 796 aa6.49□□□□□ -1.37
SCN1A-217ENST00000637988 ABI2Q9NYB9 513 aaPredicted RBP6.49□□□□□ -1.37
SCN1A-217ENST00000637988 H2AFY2Q9P0M6 372 aaPredicted RBP6.49□□□□□ -1.37
SCN1A-217ENST00000637988 RIMS1Q86UR5 1692 aaKnown RBP6.49□□□□□ -1.37
SCN1A-217ENST00000637988 PIK3R2O00459 728 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 IL18RAPO95256 599 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 KLRC2P26717 231 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 LRRC63Q05C16 580 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 UGT3A1Q6NUS8 523 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 FAM47EQ6ZV65 393 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 PIGBQ92521 554 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 L3MBTL3Q96JM7 780 aaPredicted RBP6.48□□□□□ -1.37
SCN1A-217ENST00000637988 PBKQ96KB5 322 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 PNMA5Q96PV4 448 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 EMILIN3Q9NT22 766 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 GTSE1Q9NYZ3 720 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 PCDHB6Q9Y5E3 794 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 MROH7Q68CQ1 1323 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 METP08581 1390 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 ABCC4O15439 1325 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 NDUFS3O75489 264 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 KRT37O76014 449 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 MLNP12872 115 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 HMOX2P30519 316 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 ADD2P35612 726 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 MTFR1Q15390 333 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 ENOSF1Q7L5Y1 443 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 SPACA7Q96KW9 195 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 FAM20AQ96MK3 541 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 GINM1Q9NU53 330 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 DSEQ9UL01 958 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 GOLGA8KD6RF30 607 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 E9PMD0 336 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 KIAA0391O15091 583 aaKnown RBP6.48□□□□□ -1.37
SCN1A-217ENST00000637988 POMCP01189 267 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 GUCY1A2P33402 732 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 AVPR1AP37288 418 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 PDAP1Q13442 181 aaKnown RBP6.48□□□□□ -1.37
SCN1A-217ENST00000637988 STILQ15468 1287 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 UBE2SQ16763 222 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 TMEM270Q6UE05 265 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 KRBA2Q6ZNG9 492 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 TMEM199Q8N511 208 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 IGFLR1Q9H665 355 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 MYOZ2Q9NPC6 264 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 ZC4H2Q9NQZ6 224 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 CAMSAP1Q5T5Y3 1602 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 USP6P35125 1406 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 NCAPD2Q15021 1401 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 SNTNA6NMZ2 147 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 GFPT2O94808 682 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 MYBL1P10243 752 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 PLS3P13797 630 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 INPP5BP32019 993 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 RBP5P82980 135 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 TRADDQ15628 312 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 TTC17Q96AE7 1141 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 TSPAN17Q96FV3 270 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 GPR63Q9BZJ6 419 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 RBAKQ9NYW8 714 aaPredicted RBP6.48□□□□□ -1.37
SCN1A-217ENST00000637988 TSR3Q9UJK0 312 aaKnown RBP6.48□□□□□ -1.37
SCN1A-217ENST00000637988 MROH7-TTC4A0A0A0MT08 1334 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 HIP1RO75146 1068 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 SNAP25P60880 206 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 HIF1AQ16665 826 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 C8orf34Q49A92 452 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 CENPPQ6IPU0 288 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 PADI6Q6TGC4 694 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 SKAP1Q86WV1 359 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 CAMKK1Q8N5S9 505 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 SNX31Q8N9S9 440 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 XXYLT1Q8NBI6 393 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 SHCBP1Q8NEM2 672 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 XPO6Q96QU8 1125 aaKnown RBP6.48□□□□□ -1.37
SCN1A-217ENST00000637988 OSBPL10Q9BXB5 764 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 ZBTB40Q9NUA8 1239 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 SMARCAL1Q9NZC9 954 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 ADAM22Q9P0K1 906 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 VPS9D1Q9Y2B5 631 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 SSH2Q76I76 1423 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 EXOC1LA0A1B0GW35 172 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 POTEB3A0JP26 581 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 ADORA1P30542 326 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 CREMQ03060 361 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 VPS72Q15906 364 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 POTEBQ6S5H4 581 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 MMGT1Q8N4V1 131 aa6.48□□□□□ -1.37
SCN1A-217ENST00000637988 SCFD2Q8WU76 684 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms