RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-256	ENST00000637981	CDC42EP1	Q00587	391 aa		10.5	□□□□□ -0.73
CACNA1A-256	ENST00000637981	CEBPZ	Q03701	1054 aa	Known RBP	10.5	□□□□□ -0.73
CACNA1A-256	ENST00000637981	DNM1	Q05193	864 aa	Known RBP	10.5	□□□□□ -0.73
CACNA1A-256	ENST00000637981	NCAPH2	Q6IBW4	605 aa		10.5	□□□□□ -0.73
CACNA1A-256	ENST00000637981	FAM173B	Q6P4H8	233 aa		10.5	□□□□□ -0.73
CACNA1A-256	ENST00000637981	B3GNT9	Q6UX72	402 aa		10.5	□□□□□ -0.73
CACNA1A-256	ENST00000637981	KCTD17	Q8N5Z5	321 aa		10.5	□□□□□ -0.73
CACNA1A-256	ENST00000637981	KLHL5	Q96PQ7	755 aa		10.5	□□□□□ -0.73
CACNA1A-256	ENST00000637981	FDXACB1	Q9BRP7	624 aa	Predicted RBP	10.5	□□□□□ -0.73
CACNA1A-256	ENST00000637981	VN1R3	Q9BXE9	311 aa		10.5	□□□□□ -0.73
CACNA1A-256	ENST00000637981	FAM105A	Q9NUU6	356 aa		10.5	□□□□□ -0.73
CACNA1A-256	ENST00000637981	TFIP11	Q9UBB9	837 aa	Known RBP	10.5	□□□□□ -0.73
CACNA1A-256	ENST00000637981	LRWD1	Q9UFC0	647 aa		10.5	□□□□□ -0.73
CACNA1A-256	ENST00000637981	SEPT9	Q9UHD8	586 aa	Predicted RBP	10.5	□□□□□ -0.73
CACNA1A-256	ENST00000637981	VAV3	Q9UKW4	847 aa		10.5	□□□□□ -0.73
CACNA1A-256	ENST00000637981	CLIC4	Q9Y696	253 aa		10.5	□□□□□ -0.73
CACNA1A-256	ENST00000637981	VWA3A	A6NCI4	1184 aa		10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	NARS	O43776	548 aa	Known RBP	10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	LMNA	P02545	664 aa	Known RBP	10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	CFH	P08603	1231 aa		10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	CNP	P09543	421 aa	Known RBP	10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	TXLNA	P40222	546 aa		10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	QARS	P47897	775 aa	Known RBP	10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	DNM2	P50570	870 aa		10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	RAB27A	P51159	221 aa		10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	PSMC5	P62195	406 aa		10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	SPIRE1	Q08AE8	756 aa		10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	PTPA	Q15257	358 aa		10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	TARBP2	Q15633	366 aa	Known RBP	10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	MTERF2	Q49AM1	385 aa		10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	KRT79	Q5XKE5	535 aa		10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	FOXD4L3	Q6VB84	417 aa	Predicted RBP	10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	C15orf39	Q6ZRI6	1047 aa		10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	ZNF280B	Q86YH2	543 aa		10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	RHPN2	Q8IUC4	686 aa		10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	IGSF22	Q8N9C0	903 aa		10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	KRI1	Q8N9T8	703 aa	Known RBP	10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	LINC00301	Q8NCQ3	95 aa		10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	URGCP	Q8TCY9	931 aa		10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	GJA10	Q969M2	543 aa		10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	SPATA32	Q96LK8	384 aa		10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	INO80B	Q9C086	356 aa	Predicted RBP	10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	TUFT1	Q9NNX1	390 aa		10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	MRPL17	Q9NRX2	175 aa	Known RBP	10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	IGSF9	Q9P2J2	1179 aa		10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	STK39	Q9UEW8	545 aa		10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	SRPRB	Q9Y5M8	271 aa	Known RBP	10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	C2orf16	Q68DN1	1984 aa		10.49	□□□□□ -0.73
CACNA1A-256	ENST00000637981	KRBA1	A5PL33	1030 aa		10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	TMEM150B	A6NC51	233 aa		10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	POTEM	A6NI47	508 aa		10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	C2CD2L	O14523	706 aa		10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	B4GALT3	O60512	393 aa		10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	N4BP1	O75113	896 aa	Known RBP	10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	ZNF623	O75123	536 aa		10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	RFX1	P22670	979 aa		10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	MARCKS	P29966	332 aa	Predicted RBP	10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	GBP2	P32456	591 aa	Predicted RBP	10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	UBA7	P41226	1012 aa		10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	OTUD6A	Q7L8S5	288 aa		10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	CATSPER4	Q7RTX7	472 aa		10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	ZNF410	Q86VK4	478 aa		10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	EXOC8	Q8IYI6	725 aa		10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	RSAD2	Q8WXG1	361 aa		10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	RMDN1	Q96DB5	314 aa		10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	PGBD4	Q96DM1	585 aa		10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	CALML4	Q96GE6	196 aa		10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	CDK5RAP3	Q96JB5	506 aa		10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	NLRP4	Q96MN2	994 aa		10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	FAM193B	Q96PV7	902 aa	Predicted RBP	10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	EIF2AK1	Q9BQI3	630 aa	Known RBP	10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	SH2D3A	Q9BRG2	576 aa		10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	POLR3C	Q9BUI4	534 aa	Predicted RBP	10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	NIFK	Q9BYG3	293 aa	Known RBP	10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	NT5C3A	Q9H0P0	336 aa		10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	SEMA4A	Q9H3S1	761 aa		10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	ZSWIM4	Q9H7M6	989 aa		10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	MAN1C1	Q9NR34	630 aa		10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	SUCLA2	Q9P2R7	463 aa	Predicted RBP	10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	WNT16	Q9UBV4	365 aa		10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	RCOR1	Q9UKL0	485 aa		10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	PPME1	Q9Y570	386 aa		10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	FAM186A	A6NE01	2351 aa		10.48	□□□□□ -0.73
CACNA1A-256	ENST00000637981	IGKV6-21	A0A0C4DH24	114 aa		10.47	□□□□□ -0.73
CACNA1A-256	ENST00000637981	CCDC195	A0A1B0GUA6	201 aa		10.47	□□□□□ -0.73
CACNA1A-256	ENST00000637981	EML1	O00423	815 aa		10.47	□□□□□ -0.73
CACNA1A-256	ENST00000637981	CUTA	O60888	179 aa		10.47	□□□□□ -0.73
CACNA1A-256	ENST00000637981	LILRB3	O75022	631 aa		10.47	□□□□□ -0.73
CACNA1A-256	ENST00000637981	DDHD2	O94830	711 aa		10.47	□□□□□ -0.73
CACNA1A-256	ENST00000637981	STBD1	O95210	358 aa		10.47	□□□□□ -0.73
CACNA1A-256	ENST00000637981	ALDH2	P05091	517 aa		10.47	□□□□□ -0.73
CACNA1A-256	ENST00000637981	XRCC6	P12956	609 aa	Known RBP eCLIP	10.47	□□□□□ -0.73
CACNA1A-256	ENST00000637981	RPA1	P27694	616 aa		10.47	□□□□□ -0.73
CACNA1A-256	ENST00000637981	CCT6A	P40227	531 aa	Known RBP	10.47	□□□□□ -0.73
CACNA1A-256	ENST00000637981	ME1	P48163	572 aa		10.47	□□□□□ -0.73
CACNA1A-256	ENST00000637981	XKR3	Q5GH77	459 aa		10.47	□□□□□ -0.73
CACNA1A-256	ENST00000637981	AGMO	Q6ZNB7	445 aa		10.47	□□□□□ -0.73
CACNA1A-256	ENST00000637981	KSR1	Q8IVT5	923 aa		10.47	□□□□□ -0.73
CACNA1A-256	ENST00000637981	TPH2	Q8IWU9	490 aa		10.47	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms