RNA–Protein interactions for RNA: ENST00000637594.1

CLN8-214, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 406 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-214ENST00000637594 ARF4P18085 180 aaPredicted RBP9.79□□□□□ -0.84
CLN8-214ENST00000637594 CREMQ03060 361 aa9.79□□□□□ -0.84
CLN8-214ENST00000637594 STK3Q13188 491 aa9.79□□□□□ -0.84
CLN8-214ENST00000637594 CTTNQ14247 550 aaKnown RBP9.79□□□□□ -0.84
CLN8-214ENST00000637594 USP41Q3LFD5 358 aa9.79□□□□□ -0.84
CLN8-214ENST00000637594 EARS2Q5JPH6 523 aaKnown RBP9.79□□□□□ -0.84
CLN8-214ENST00000637594 PHLDB3Q6NSJ2 640 aa9.79□□□□□ -0.84
CLN8-214ENST00000637594 SLC27A1Q6PCB7 646 aa9.79□□□□□ -0.84
CLN8-214ENST00000637594 FRMD5Q7Z6J6 570 aa9.79□□□□□ -0.84
CLN8-214ENST00000637594 POTEDQ86YR6 584 aa9.79□□□□□ -0.84
CLN8-214ENST00000637594 HACE1Q8IYU2 909 aa9.79□□□□□ -0.84
CLN8-214ENST00000637594 SIX5Q8N196 739 aa9.79□□□□□ -0.84
CLN8-214ENST00000637594 FLCNQ8NFG4 579 aa9.79□□□□□ -0.84
CLN8-214ENST00000637594 WASF1Q92558 559 aa9.79□□□□□ -0.84
CLN8-214ENST00000637594 EIF2AK1Q9BQI3 630 aaKnown RBP9.79□□□□□ -0.84
CLN8-214ENST00000637594 GPR62Q9BZJ7 368 aa9.79□□□□□ -0.84
CLN8-214ENST00000637594 PRKD2Q9BZL6 878 aa9.79□□□□□ -0.84
CLN8-214ENST00000637594 ZFP37Q9Y6Q3 630 aaPredicted RBP9.79□□□□□ -0.84
CLN8-214ENST00000637594 CLUHO75153 1309 aa9.79□□□□□ -0.84
CLN8-214ENST00000637594 KRBA1A5PL33 1030 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 SPDYE4A6NLX3 237 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 INO80B-WBP1J3KQ70 363 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 TGM5O43548 720 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 SRFP11831 508 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 LAMP2P13473 410 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 FDPSP14324 419 aaKnown RBP9.78□□□□□ -0.84
CLN8-214ENST00000637594 GLRA2P23416 452 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 MLH1P40692 756 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 RARRES1P49788 294 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 SCNN1GP51170 649 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 CAPSQ13938 189 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 ANGPT1Q15389 498 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 FAM187BQ17R55 369 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 NCAPH2Q6IBW4 605 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 POTEGQ6S5H5 508 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 PPP4R3CPQ6ZMV5 832 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 ASAP3Q8TDY4 903 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 SMG7Q92540 1137 aaKnown RBP9.78□□□□□ -0.84
CLN8-214ENST00000637594 BORCS6Q96GS4 357 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 CPB2Q96IY4 423 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 PRIMPOLQ96LW4 560 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 ZFP42Q96MM3 310 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 MTMR9Q96QG7 549 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 MYADMQ96S97 322 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 FZD8Q9H461 694 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 SLC2A4RGQ9NR83 387 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 GJB4Q9NTQ9 266 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 ADAM28Q9UKQ2 775 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 FBXL21Q9UKT6 434 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 TPCN1Q9ULQ1 816 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 PRG3Q9Y2Y8 225 aaPredicted RBP9.78□□□□□ -0.84
CLN8-214ENST00000637594 HES2Q9Y543 173 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 DENND4AQ7Z401 1863 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 CFAP54Q96N23 3096 aa9.78□□□□□ -0.84
CLN8-214ENST00000637594 F8W810 466 aa9.77□□□□□ -0.85
CLN8-214ENST00000637594 NARSO43776 548 aaKnown RBP9.77□□□□□ -0.85
CLN8-214ENST00000637594 RFPL2O75678 378 aa9.77□□□□□ -0.85
CLN8-214ENST00000637594 ZMYND10O75800 440 aa9.77□□□□□ -0.85
CLN8-214ENST00000637594 GBP2P32456 591 aaPredicted RBP9.77□□□□□ -0.85
CLN8-214ENST00000637594 ANAPC15P60006 121 aa9.77□□□□□ -0.85
CLN8-214ENST00000637594 CYP4A11Q02928 519 aa9.77□□□□□ -0.85
CLN8-214ENST00000637594 GRIK3Q13003 919 aa9.77□□□□□ -0.85
CLN8-214ENST00000637594 ANKRD1Q15327 319 aa9.77□□□□□ -0.85
CLN8-214ENST00000637594 FUT10Q6P4F1 479 aa9.77□□□□□ -0.85
CLN8-214ENST00000637594 RTL10Q7L3V2 364 aa9.77□□□□□ -0.85
CLN8-214ENST00000637594 ERMP1Q7Z2K6 904 aa9.77□□□□□ -0.85
CLN8-214ENST00000637594 PALB2Q86YC2 1186 aa9.77□□□□□ -0.85
CLN8-214ENST00000637594 ADSSL1Q8N142 457 aa9.77□□□□□ -0.85
CLN8-214ENST00000637594 RSAD2Q8WXG1 361 aa9.77□□□□□ -0.85
CLN8-214ENST00000637594 TRIM6Q9C030 488 aaPredicted RBP9.77□□□□□ -0.85
CLN8-214ENST00000637594 NXF3Q9H4D5 531 aaKnown RBP9.77□□□□□ -0.85
CLN8-214ENST00000637594 TTC12Q9H892 705 aaPredicted RBP9.77□□□□□ -0.85
CLN8-214ENST00000637594 DLGAP2Q9P1A6 1054 aa9.77□□□□□ -0.85
CLN8-214ENST00000637594 ORC3Q9UBD5 711 aaPredicted RBP9.77□□□□□ -0.85
CLN8-214ENST00000637594 ZFHX2Q9C0A1 2572 aaPredicted RBP9.77□□□□□ -0.85
CLN8-214ENST00000637594 B4GALT5O43286 388 aa9.76□□□□□ -0.85
CLN8-214ENST00000637594 TADA2AO75478 443 aa9.76□□□□□ -0.85
CLN8-214ENST00000637594 POU2F2P09086 479 aa9.76□□□□□ -0.85
CLN8-214ENST00000637594 HNRNPA1P09651 372 aaKnown RBP eCLIP9.76□□□□□ -0.85
CLN8-214ENST00000637594 SPATA31D3P0C874 917 aa9.76□□□□□ -0.85
CLN8-214ENST00000637594 SPATA31C1P0DKV0 1188 aa9.76□□□□□ -0.85
CLN8-214ENST00000637594 AKAP5P24588 427 aa9.76□□□□□ -0.85
CLN8-214ENST00000637594 HOXA9P31269 272 aa9.76□□□□□ -0.85
CLN8-214ENST00000637594 KRT2P35908 639 aa9.76□□□□□ -0.85
CLN8-214ENST00000637594 STARD6P59095 220 aa9.76□□□□□ -0.85
CLN8-214ENST00000637594 NR5A1Q13285 461 aa9.76□□□□□ -0.85
CLN8-214ENST00000637594 TUSC3Q13454 348 aa9.76□□□□□ -0.85
CLN8-214ENST00000637594 HTR4Q13639 388 aa9.76□□□□□ -0.85
CLN8-214ENST00000637594 CALCRLQ16602 461 aa9.76□□□□□ -0.85
CLN8-214ENST00000637594 UVSSAQ2YD98 709 aa9.76□□□□□ -0.85
CLN8-214ENST00000637594 CDCA2Q69YH5 1023 aaPredicted RBP9.76□□□□□ -0.85
CLN8-214ENST00000637594 SPATA31D4Q6ZUB0 917 aa9.76□□□□□ -0.85
CLN8-214ENST00000637594 LNX1Q8TBB1 728 aaPredicted RBP9.76□□□□□ -0.85
CLN8-214ENST00000637594 PIK3R5Q8WYR1 880 aa9.76□□□□□ -0.85
CLN8-214ENST00000637594 CLSTN3Q9BQT9 956 aa9.76□□□□□ -0.85
CLN8-214ENST00000637594 BRMS1Q9HCU9 246 aa9.76□□□□□ -0.85
CLN8-214ENST00000637594 BMP2KQ9NSY1 1161 aaPredicted RBP9.76□□□□□ -0.85
CLN8-214ENST00000637594 PRMT7Q9NVM4 692 aaPredicted RBP9.76□□□□□ -0.85
CLN8-214ENST00000637594 SIT1Q9Y3P8 196 aa9.76□□□□□ -0.85
CLN8-214ENST00000637594 FAM205CA6NFA0 338 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms