RNA–Protein interactions for RNA: ENST00000637189.1

CHRNA7-225, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 2

Gene CHRNA7, Length 6,181 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-225ENST00000637189 LDHAP00338 332 aaKnown RBP13.36□□□□□ -0.27
CHRNA7-225ENST00000637189 SOX11P35716 441 aa13.36□□□□□ -0.27
CHRNA7-225ENST00000637189 AARSP49588 968 aaKnown RBP eCLIP13.36□□□□□ -0.27
CHRNA7-225ENST00000637189 PMS2P54278 862 aa13.36□□□□□ -0.27
CHRNA7-225ENST00000637189 GPC5P78333 572 aa13.36□□□□□ -0.27
CHRNA7-225ENST00000637189 CRYMQ14894 314 aa13.36□□□□□ -0.27
CHRNA7-225ENST00000637189 TBC1D9BQ66K14 1250 aa13.36□□□□□ -0.27
CHRNA7-225ENST00000637189 CATSPER4Q7RTX7 472 aa13.36□□□□□ -0.27
CHRNA7-225ENST00000637189 HPS4Q9NQG7 708 aa13.36□□□□□ -0.27
CHRNA7-225ENST00000637189 PALLDQ8WX93 1383 aa13.36□□□□□ -0.27
CHRNA7-225ENST00000637189 MEFVO15553 781 aaPredicted RBP13.36□□□□□ -0.27
CHRNA7-225ENST00000637189 IGKV5-2P06315 115 aa13.36□□□□□ -0.27
CHRNA7-225ENST00000637189 IFNA8P32881 189 aa13.36□□□□□ -0.27
CHRNA7-225ENST00000637189 RAB14P61106 215 aa13.36□□□□□ -0.27
CHRNA7-225ENST00000637189 TJAP1Q5JTD0 557 aa13.36□□□□□ -0.27
CHRNA7-225ENST00000637189 HDAC6Q9UBN7 1215 aa13.36□□□□□ -0.27
CHRNA7-225ENST00000637189 NEO1Q92859 1461 aa13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 USP27XA6NNY8 438 aa13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 CLDN3O15551 220 aa13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 TBL3Q12788 808 aaKnown RBP13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 CDV3Q9UKY7 258 aaKnown RBP13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 AURKCQ9UQB9 309 aa13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 RPAP1Q9BWH6 1393 aaPredicted RBP13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 PP2D1A8MPX8 630 aa13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 PJA2O43164 708 aa13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 PAMP19021 973 aa13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 STAT3P40763 770 aa13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 KRT17Q04695 432 aa13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 SYCP2LQ5T4T6 812 aa13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 CIAPIN1Q6FI81 312 aa13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 FMR1NBQ8N0W7 255 aaPredicted RBP13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 ZNF579Q8NAF0 562 aaKnown RBP13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 CLMNQ96JQ2 1002 aa13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 C11orf70Q9BRQ4 267 aa13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 DLGAP3O95886 979 aa13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 SERPINB10P48595 397 aa13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 ARFIP2P53365 341 aa13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 ATXN3P54252 364 aaPredicted RBP13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 GUCY1A3Q02108 690 aa13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 RMDN3Q96TC7 470 aa13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 NUP85Q9BW27 656 aa13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 ADNPQ9H2P0 1102 aa13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 CASS4Q9NQ75 786 aa13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 PCSK1NQ9UHG2 260 aa13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 STK36Q9NRP7 1315 aa13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 NPHP4O75161 1426 aaPredicted RBP13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 PRR23D1E9PI22 279 aaPredicted RBP13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 PRR23D2P0DMB1 279 aaPredicted RBP13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 IREB2P48200 963 aaKnown RBP13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 PAPOLAP51003 745 aaKnown RBP13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 AP1B1Q10567 949 aa13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 NFX1Q12986 1120 aaKnown RBP13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 ZNF699Q32M78 642 aa13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 ULK4Q96C45 1275 aa13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 SESN1Q9Y6P5 492 aa13.35□□□□□ -0.27
CHRNA7-225ENST00000637189 LRRIQ3A6PVS8 624 aaPredicted RBP13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 RBBP7Q16576 425 aa13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 TXNRD1Q16881 649 aa13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 ZNF746Q6NUN9 644 aaPredicted RBP13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 ARHGAP22Q7Z5H3 698 aa13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 DDIASQ8IXT1 998 aa13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 XXYLT1Q8NBI6 393 aa13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 OPTNQ96CV9 577 aa13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 ATF5Q9Y2D1 282 aaPredicted RBP13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 C21orf2O43822 256 aa13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 PPHLN1Q8NEY8 458 aaKnown RBP13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 RBM41Q96IZ5 413 aaKnown RBP13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 POTEFA5A3E0 1075 aa13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 POTEIP0CG38 1075 aa13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 POTEGQ6S5H5 508 aa13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 POTEEQ6S8J3 1075 aa13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 BZW1Q7L1Q6 419 aaKnown RBP13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 SLITRK6Q9H5Y7 841 aa13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 IQCA1LA6NCM1 817 aa13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 KPNA7A9QM74 516 aa13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 BRAFP15056 766 aa13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 EIF2B2P49770 351 aaKnown RBP13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 PPP2R2AP63151 447 aa13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 PLIN5Q00G26 463 aa13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 PTK2BQ14289 1009 aa13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 DHX40Q8IX18 779 aaKnown RBP13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 IFT43Q96FT9 208 aa13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 CEP95Q96GE4 821 aa13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 TMEM51Q9NW97 253 aa13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 TEX33O43247 280 aa13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 MB21D2Q8IYB1 491 aaPredicted RBP13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 ZNF564Q8TBZ8 553 aaPredicted RBP13.34□□□□□ -0.27
CHRNA7-225ENST00000637189 XPO1O14980 1071 aaKnown RBP13.33□□□□□ -0.27
CHRNA7-225ENST00000637189 KRT38O76015 456 aa13.33□□□□□ -0.27
CHRNA7-225ENST00000637189 MED21Q13503 144 aa13.33□□□□□ -0.27
CHRNA7-225ENST00000637189 PROM2Q8N271 834 aa13.33□□□□□ -0.27
CHRNA7-225ENST00000637189 ZNF668Q96K58 619 aaPredicted RBP13.33□□□□□ -0.27
CHRNA7-225ENST00000637189 DDX47Q9H0S4 455 aaKnown RBP13.33□□□□□ -0.27
CHRNA7-225ENST00000637189 TDRD3Q9H7E2 651 aaKnown RBP13.33□□□□□ -0.27
CHRNA7-225ENST00000637189 MINPP1Q9UNW1 487 aa13.33□□□□□ -0.27
CHRNA7-225ENST00000637189 CFAP74Q9C0B2 1584 aa13.33□□□□□ -0.27
CHRNA7-225ENST00000637189 MIF4GDA9UHW6 222 aaKnown RBP13.33□□□□□ -0.28
CHRNA7-225ENST00000637189 RC3H1Q5TC82 1133 aaKnown RBP13.33□□□□□ -0.28
CHRNA7-225ENST00000637189 OR9Q1Q8NGQ5 310 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 604 ms