RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 EMSYQ7Z589 1322 aa12.45□□□□□ -0.42
CLN6-217ENST00000636964 CCL15-CCL14A0A0B4J2E2 113 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 BTBD19C9JJ37 291 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 ZMYND10O75800 440 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 NAT1P18440 290 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 FNTAP49354 379 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 STAT5BP51692 787 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 MNAT1P51948 309 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 PPP3CAQ08209 521 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 CCL15Q16663 113 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 POP1Q99575 1024 aaKnown RBP12.44□□□□□ -0.42
CLN6-217ENST00000636964 MCM3APO60318 1980 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 A0A087X0T9 212 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 CAPN15O75808 1086 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 FAM228BP0C875 321 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 VAMP7P51809 220 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 MYL7Q01449 175 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 NEDD9Q14511 834 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 MCPH1Q8NEM0 835 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 GLG1Q92896 1179 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 ELMO3Q96BJ8 720 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 BICD1Q96G01 975 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 FAM84AQ96KN4 292 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 ST6GALNAC4Q9H4F1 302 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 SLC24A3Q9HC58 644 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 ETAA1Q9NY74 926 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 MYO1FO00160 1098 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 NEBLO76041 1014 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 ADRB2P07550 413 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 PTK2Q05397 1052 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 ARHGAP44Q17R89 818 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 GJC2Q5T442 439 aaPredicted RBP12.44□□□□□ -0.42
CLN6-217ENST00000636964 SLC39A4Q6P5W5 647 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 IRF2BP2Q7Z5L9 587 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 MS4A4AQ96JQ5 239 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 IFT74Q96LB3 600 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 VIPAS39Q9H9C1 493 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 AIPL1Q9NZN9 384 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 SALL4Q9UJQ4 1053 aa12.44□□□□□ -0.42
CLN6-217ENST00000636964 DNAJC25-GNG10A0A024R161 153 aa12.43□□□□□ -0.42
CLN6-217ENST00000636964 CTAGE15A4D2H0 777 aa12.43□□□□□ -0.42
CLN6-217ENST00000636964 HNRNPDLO14979 420 aaKnown RBP12.43□□□□□ -0.42
CLN6-217ENST00000636964 SRGAP2O75044 1071 aa12.43□□□□□ -0.42
CLN6-217ENST00000636964 GFPT2O94808 682 aa12.43□□□□□ -0.42
CLN6-217ENST00000636964 CELF2O95319 508 aaKnown RBP12.43□□□□□ -0.42
CLN6-217ENST00000636964 MOCS3O95396 460 aa12.43□□□□□ -0.42
CLN6-217ENST00000636964 ATP1A1P05023 1023 aaKnown RBP12.43□□□□□ -0.42
CLN6-217ENST00000636964 CTAGE8P0CG41 777 aa12.43□□□□□ -0.42
CLN6-217ENST00000636964 CTAGE6Q86UF2 777 aa12.43□□□□□ -0.42
CLN6-217ENST00000636964 MAP4K3Q8IVH8 894 aa12.43□□□□□ -0.42
CLN6-217ENST00000636964 CTAGE4Q8IX94 777 aa12.43□□□□□ -0.42
CLN6-217ENST00000636964 ASAP3Q8TDY4 903 aa12.43□□□□□ -0.42
CLN6-217ENST00000636964 SEPT1Q8WYJ6 367 aa12.43□□□□□ -0.42
CLN6-217ENST00000636964 POMGNT1Q8WZA1 660 aa12.43□□□□□ -0.42
CLN6-217ENST00000636964 SYN2Q92777 582 aaPredicted RBP12.43□□□□□ -0.42
CLN6-217ENST00000636964 THOC1Q96FV9 657 aaKnown RBP12.43□□□□□ -0.42
CLN6-217ENST00000636964 SSU72P8A0A1W2PR75 194 aa12.43□□□□□ -0.42
CLN6-217ENST00000636964 LRRIQ4A6NIV6 560 aa12.43□□□□□ -0.42
CLN6-217ENST00000636964 BUB1O43683 1085 aa12.43□□□□□ -0.42
CLN6-217ENST00000636964 DRP2Q13474 957 aa12.43□□□□□ -0.42
CLN6-217ENST00000636964 METTL7BQ6UX53 244 aa12.43□□□□□ -0.42
CLN6-217ENST00000636964 TAS1R3Q7RTX0 852 aa12.43□□□□□ -0.42
CLN6-217ENST00000636964 ZNF571Q7Z3V5 609 aaPredicted RBP12.43□□□□□ -0.42
CLN6-217ENST00000636964 GPRC5AQ8NFJ5 357 aa12.43□□□□□ -0.42
CLN6-217ENST00000636964 BRI3BPQ8WY22 251 aa12.43□□□□□ -0.42
CLN6-217ENST00000636964 NTPCRQ9BSD7 190 aaKnown RBP12.43□□□□□ -0.42
CLN6-217ENST00000636964 INTS2Q9H0H0 1204 aaKnown RBP12.43□□□□□ -0.42
CLN6-217ENST00000636964 MROH8Q9H579 483 aa12.43□□□□□ -0.42
CLN6-217ENST00000636964 GBA2Q9HCG7 927 aaPredicted RBP12.43□□□□□ -0.42
CLN6-217ENST00000636964 DNAJC12Q9UKB3 198 aa12.43□□□□□ -0.42
CLN6-217ENST00000636964 EXOC7Q9UPT5 735 aa12.43□□□□□ -0.42
CLN6-217ENST00000636964 SCN4AP35499 1836 aa12.43□□□□□ -0.42
CLN6-217ENST00000636964 NOP56O00567 594 aaKnown RBP12.42□□□□□ -0.42
CLN6-217ENST00000636964 SNRNP35Q16560 246 aaKnown RBP12.42□□□□□ -0.42
CLN6-217ENST00000636964 C1orf220Q5T0J3 134 aa12.42□□□□□ -0.42
CLN6-217ENST00000636964 INTS8Q75QN2 995 aaKnown RBP12.42□□□□□ -0.42
CLN6-217ENST00000636964 SLC7A3Q8WY07 619 aa12.42□□□□□ -0.42
CLN6-217ENST00000636964 PACSIN1Q9BY11 444 aa12.42□□□□□ -0.42
CLN6-217ENST00000636964 MYO1AQ9UBC5 1043 aa12.42□□□□□ -0.42
CLN6-217ENST00000636964 CAPN6Q9Y6Q1 641 aa12.42□□□□□ -0.42
CLN6-217ENST00000636964 IGKV6D-21A0A0A0MT36 114 aa12.42□□□□□ -0.42
CLN6-217ENST00000636964 SETSIPP0DME0 302 aa12.42□□□□□ -0.42
CLN6-217ENST00000636964 TXNP10599 105 aaKnown RBP12.42□□□□□ -0.42
CLN6-217ENST00000636964 TGFB3P10600 412 aa12.42□□□□□ -0.42
CLN6-217ENST00000636964 SPIRE2Q8WWL2 714 aa12.42□□□□□ -0.42
CLN6-217ENST00000636964 ZBTB10Q96DT7 871 aa12.42□□□□□ -0.42
CLN6-217ENST00000636964 ZNF668Q96K58 619 aaPredicted RBP12.42□□□□□ -0.42
CLN6-217ENST00000636964 SPATA33Q96N06 139 aa12.42□□□□□ -0.42
CLN6-217ENST00000636964 AZI2Q9H6S1 392 aa12.42□□□□□ -0.42
CLN6-217ENST00000636964 PNMA3Q9UL41 463 aa12.42□□□□□ -0.42
CLN6-217ENST00000636964 ZNFX1Q9P2E3 1918 aaKnown RBP12.42□□□□□ -0.42
CLN6-217ENST00000636964 GTPBP10A4D1E9 387 aaKnown RBP12.42□□□□□ -0.42
CLN6-217ENST00000636964 LCA5LO95447 670 aa12.42□□□□□ -0.42
CLN6-217ENST00000636964 CETPP11597 493 aa12.42□□□□□ -0.42
CLN6-217ENST00000636964 GLRA2P23416 452 aa12.42□□□□□ -0.42
CLN6-217ENST00000636964 DRAP1Q14919 205 aaPredicted RBP12.42□□□□□ -0.42
CLN6-217ENST00000636964 PHLDB3Q6NSJ2 640 aa12.42□□□□□ -0.42
CLN6-217ENST00000636964 COG1Q8WTW3 980 aa12.42□□□□□ -0.42
CLN6-217ENST00000636964 MMS19Q96T76 1030 aa12.42□□□□□ -0.42
CLN6-217ENST00000636964 MPHOSPH6Q99547 160 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms