RNA–Protein interactions for RNA: ENST00000636709.1

CHRNA7-219, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 7,722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-219ENST00000636709 ROR1Q01973 937 aa9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 AP3B2Q13367 1082 aa9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 SNX17Q15036 470 aa9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 PLCL1Q15111 1095 aa9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 DGKDQ16760 1214 aa9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 EIF2AK1Q9BQI3 630 aaKnown RBP9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 LATS2Q9NRM7 1088 aa9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 COPEO14579 308 aa9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 SPAG7O75391 227 aa9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 PDAP1Q13442 181 aaKnown RBP9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 RUBCNLQ9H714 662 aa9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 C5orf58C9J3I9 102 aa9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 DIAPH2O60879 1101 aa9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 MZF1P28698 734 aaPredicted RBP9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 HARS2P49590 506 aaKnown RBP9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 BAATQ14032 418 aaPredicted RBP9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 NAALADL2Q58DX5 795 aa9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 UPF3AQ9H1J1 476 aaKnown RBP9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 GFAPP14136 432 aa9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 SFNP31947 248 aa9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 TMEM132DQ14C87 1099 aa9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 PID1Q7Z2X4 250 aa9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 TMEM169Q96HH4 297 aa9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 PKP3Q9Y446 797 aa9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 CALB1P05937 261 aa9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 CDH18Q13634 790 aa9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 LRRC23Q53EV4 343 aaPredicted RBP9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 CYP4A22Q5TCH4 519 aa9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 ENOX1Q8TC92 643 aaKnown RBP9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 OTUB1Q96FW1 271 aaPredicted RBP9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 STN1Q9H668 368 aaKnown RBP9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 ADA2Q9NZK5 511 aa9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 CPA4Q9UI42 421 aa9.4□□□□□ -0.9
CHRNA7-219ENST00000636709 PPP6R2O75170 966 aa9.4□□□□□ -0.91
CHRNA7-219ENST00000636709 NPTXRO95502 500 aa9.4□□□□□ -0.91
CHRNA7-219ENST00000636709 ADRA2BP18089 450 aa9.4□□□□□ -0.91
CHRNA7-219ENST00000636709 KRT72Q14CN4 511 aa9.4□□□□□ -0.91
CHRNA7-219ENST00000636709 TOMM20Q15388 145 aa9.4□□□□□ -0.91
CHRNA7-219ENST00000636709 CLEC4GQ6UXB4 293 aa9.4□□□□□ -0.91
CHRNA7-219ENST00000636709 TNIP3Q96KP6 325 aa9.4□□□□□ -0.91
CHRNA7-219ENST00000636709 GJB4Q9NTQ9 266 aa9.4□□□□□ -0.91
CHRNA7-219ENST00000636709 IGSF1Q8N6C5 1336 aa9.4□□□□□ -0.91
CHRNA7-219ENST00000636709 SYNCRIPO60506 623 aaKnown RBP9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 FGGP02679 453 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 HSD17B4P51659 736 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 CDH6P55285 790 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 DUOXA2Q1HG44 320 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 QRICH1Q2TAL8 776 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 ZKSCAN4Q969J2 545 aaPredicted RBP9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 ASPSCR1Q9BZE9 553 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 FAM49BQ9NUQ9 324 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 FAM135BQ49AJ0 1406 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 C17orf102A2RUQ5 167 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 TRIM49BA6NDI0 452 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 P4HBP07237 508 aaKnown RBP9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 HIST1H2AGP0C0S8 130 aaPredicted RBP9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 HIST1H2ADP20671 130 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 HMOX2P30519 316 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 EFCAB12Q6NXP0 572 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 PPM1NQ8N819 430 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 HIST1H2AHQ96KK5 128 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 HIST1H2AJQ99878 128 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 H2AFJQ9BTM1 129 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 LSG1Q9H089 658 aaKnown RBP9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 PNMA8BQ9ULN7 279 aaPredicted RBP9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 BICRAQ9NZM4 1560 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 APOL1O14791 398 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 RAP1GDS1P52306 607 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 DPYDQ12882 1025 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 IFT88Q13099 833 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 PKP1Q13835 747 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 DPCR1Q3MIW9 517 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 WDR72Q3MJ13 1102 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 ACAD11Q709F0 780 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 LRRC8AQ8IWT6 810 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 GPD1LQ8N335 351 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 ATPAF2Q8N5M1 289 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 HAUS4Q9H6D7 363 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 RWDD2AQ9UIY3 292 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 MTMR6Q9Y217 621 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 ADGBQ8N7X0 1667 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 DNAJC8O75937 253 aaPredicted RBP9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 ATP1A1P05023 1023 aaKnown RBP9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 DARSP14868 501 aaKnown RBP9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 GPS1Q13098 491 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 ERAP2Q6P179 960 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 CLEC10AQ8IUN9 316 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 SP8Q8IXZ3 490 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 TM6SF1Q9BZW5 370 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 MLXIPLQ9NP71 852 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 SKAP2O75563 359 aaPredicted RBP9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 HSPA1AP0DMV8 641 aaKnown RBP9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 HSPA1BP0DMV9 641 aaKnown RBP9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 CYP2C9P11712 490 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 NR1H3Q13133 447 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 RASIP1Q5U651 963 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 SLC7A14Q8TBB6 771 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 PPP1R14AQ96A00 147 aa9.39□□□□□ -0.91
CHRNA7-219ENST00000636709 ADAMTS1Q9UHI8 967 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms