RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 FAM193BQ96PV7 902 aaPredicted RBP5.5□□□□□ -1.53
CLN5-212ENST00000636602 AMNQ9BXJ7 453 aa5.5□□□□□ -1.53
CLN5-212ENST00000636602 MTG2Q9H4K7 406 aa5.5□□□□□ -1.53
CLN5-212ENST00000636602 FAM204AQ9H8W3 233 aa5.5□□□□□ -1.53
CLN5-212ENST00000636602 RBPJLQ9UBG7 517 aa5.5□□□□□ -1.53
CLN5-212ENST00000636602 PRSS50Q9UI38 385 aa5.5□□□□□ -1.53
CLN5-212ENST00000636602 USP18Q9UMW8 372 aa5.5□□□□□ -1.53
CLN5-212ENST00000636602 DNM3Q9UQ16 869 aa5.5□□□□□ -1.53
CLN5-212ENST00000636602 ZNF839A8K0R7 811 aa5.49□□□□□ -1.53
CLN5-212ENST00000636602 FOXS1O43638 330 aa5.49□□□□□ -1.53
CLN5-212ENST00000636602 ECE1P42892 770 aa5.49□□□□□ -1.53
CLN5-212ENST00000636602 FXR1P51114 621 aaKnown RBP eCLIP5.49□□□□□ -1.53
CLN5-212ENST00000636602 NKX3-2P78367 333 aa5.49□□□□□ -1.53
CLN5-212ENST00000636602 DGCR2P98153 550 aa5.49□□□□□ -1.53
CLN5-212ENST00000636602 NFATC3Q12968 1075 aa5.49□□□□□ -1.53
CLN5-212ENST00000636602 SAFB2Q14151 953 aaKnown RBP eCLIP5.49□□□□□ -1.53
CLN5-212ENST00000636602 ANO4Q32M45 955 aa5.49□□□□□ -1.53
CLN5-212ENST00000636602 VASNQ6EMK4 673 aa5.49□□□□□ -1.53
CLN5-212ENST00000636602 DPY19L2P1Q6NXN4 242 aa5.49□□□□□ -1.53
CLN5-212ENST00000636602 LYSMD2Q8IV50 215 aa5.49□□□□□ -1.53
CLN5-212ENST00000636602 NEU4Q8WWR8 484 aaPredicted RBP5.49□□□□□ -1.53
CLN5-212ENST00000636602 EXTL1Q92935 676 aa5.49□□□□□ -1.53
CLN5-212ENST00000636602 MVB12AQ96EY5 273 aa5.49□□□□□ -1.53
CLN5-212ENST00000636602 ZSWIM3Q96MP5 696 aa5.49□□□□□ -1.53
CLN5-212ENST00000636602 GALNT8Q9NY28 637 aa5.49□□□□□ -1.53
CLN5-212ENST00000636602 HSPBP1Q9NZL4 362 aa5.49□□□□□ -1.53
CLN5-212ENST00000636602 DENND2AQ9ULE3 1009 aa5.49□□□□□ -1.53
CLN5-212ENST00000636602 ZDHHC9Q9Y397 364 aa5.49□□□□□ -1.53
CLN5-212ENST00000636602 CDY2AQ9Y6F7 541 aa5.49□□□□□ -1.53
CLN5-212ENST00000636602 ANO9A1A5B4 782 aa5.48□□□□□ -1.53
CLN5-212ENST00000636602 A6NNZ2 444 aa5.48□□□□□ -1.53
CLN5-212ENST00000636602 PLSCR1O15162 318 aa5.48□□□□□ -1.53
CLN5-212ENST00000636602 MAFGO15525 162 aa5.48□□□□□ -1.53
CLN5-212ENST00000636602 OPHN1O60890 802 aa5.48□□□□□ -1.53
CLN5-212ENST00000636602 PHKG2P15735 406 aa5.48□□□□□ -1.53
CLN5-212ENST00000636602 RHCEP18577 417 aa5.48□□□□□ -1.53
CLN5-212ENST00000636602 USP14P54578 494 aa5.48□□□□□ -1.53
CLN5-212ENST00000636602 RHDQ02161 417 aa5.48□□□□□ -1.53
CLN5-212ENST00000636602 MALLQ13021 153 aa5.48□□□□□ -1.53
CLN5-212ENST00000636602 LLGL1Q15334 1064 aa5.48□□□□□ -1.53
CLN5-212ENST00000636602 VPS72Q15906 364 aa5.48□□□□□ -1.53
CLN5-212ENST00000636602 TCTN3Q6NUS6 607 aa5.48□□□□□ -1.53
CLN5-212ENST00000636602 TMC5Q6UXY8 1006 aa5.48□□□□□ -1.53
CLN5-212ENST00000636602 CHST15Q7LFX5 561 aaPredicted RBP5.48□□□□□ -1.53
CLN5-212ENST00000636602 PPP1R35Q8TAP8 253 aa5.48□□□□□ -1.53
CLN5-212ENST00000636602 GAB3Q8WWW8 586 aa5.48□□□□□ -1.53
CLN5-212ENST00000636602 ZCCHC14Q8WYQ9 949 aaKnown RBP5.48□□□□□ -1.53
CLN5-212ENST00000636602 C1GALT1C1Q96EU7 318 aa5.48□□□□□ -1.53
CLN5-212ENST00000636602 GNRHR2Q96P88 292 aa5.48□□□□□ -1.53
CLN5-212ENST00000636602 NOL10Q9BSC4 688 aaKnown RBP5.48□□□□□ -1.53
CLN5-212ENST00000636602 BARX1Q9HBU1 254 aaPredicted RBP5.48□□□□□ -1.53
CLN5-212ENST00000636602 DDX21Q9NR30 783 aaKnown RBP eCLIP5.48□□□□□ -1.53
CLN5-212ENST00000636602 FTSJ1Q9UET6 329 aa5.48□□□□□ -1.53
CLN5-212ENST00000636602 PCDHB6Q9Y5E3 794 aa5.48□□□□□ -1.53
CLN5-212ENST00000636602 CCDC154A6NI56 674 aa5.47□□□□□ -1.53
CLN5-212ENST00000636602 TPP1O14773 563 aa5.47□□□□□ -1.53
CLN5-212ENST00000636602 PMM2O15305 246 aa5.47□□□□□ -1.53
CLN5-212ENST00000636602 CYP7B1O75881 506 aa5.47□□□□□ -1.53
CLN5-212ENST00000636602 CNOT4O95628 575 aaKnown RBP5.47□□□□□ -1.53
CLN5-212ENST00000636602 XPAP23025 273 aaPredicted RBP5.47□□□□□ -1.53
CLN5-212ENST00000636602 APEX1P27695 318 aaKnown RBP5.47□□□□□ -1.53
CLN5-212ENST00000636602 PGS1Q32NB8 556 aa5.47□□□□□ -1.53
CLN5-212ENST00000636602 MUM1L1Q5H9M0 696 aa5.47□□□□□ -1.53
CLN5-212ENST00000636602 CYB5RLQ6IPT4 315 aa5.47□□□□□ -1.53
CLN5-212ENST00000636602 CCDC149Q6ZUS6 474 aa5.47□□□□□ -1.53
CLN5-212ENST00000636602 OVCH2Q7RTZ1 564 aa5.47□□□□□ -1.53
CLN5-212ENST00000636602 SRGAP1Q7Z6B7 1085 aa5.47□□□□□ -1.53
CLN5-212ENST00000636602 PROSER1Q86XN7 944 aa5.47□□□□□ -1.53
CLN5-212ENST00000636602 LDLRAD3Q86YD5 345 aa5.47□□□□□ -1.53
CLN5-212ENST00000636602 DENND1CQ8IV53 801 aa5.47□□□□□ -1.53
CLN5-212ENST00000636602 SLC41A1Q8IVJ1 513 aa5.47□□□□□ -1.53
CLN5-212ENST00000636602 PRR18Q8N4B5 295 aa5.47□□□□□ -1.53
CLN5-212ENST00000636602 CDYL2Q8N8U2 506 aa5.47□□□□□ -1.53
CLN5-212ENST00000636602 NRG4Q8WWG1 115 aa5.47□□□□□ -1.53
CLN5-212ENST00000636602 EDAQ92838 391 aa5.47□□□□□ -1.53
CLN5-212ENST00000636602 FATE1Q969F0 183 aa5.47□□□□□ -1.53
CLN5-212ENST00000636602 CLIC6Q96NY7 704 aa5.47□□□□□ -1.53
CLN5-212ENST00000636602 ADI1Q9BV57 179 aa5.47□□□□□ -1.53
CLN5-212ENST00000636602 OR10A5Q9H207 317 aa5.47□□□□□ -1.53
CLN5-212ENST00000636602 SEC61A2Q9H9S3 476 aa5.47□□□□□ -1.53
CLN5-212ENST00000636602 EVLQ9UI08 416 aaPredicted RBP5.47□□□□□ -1.53
CLN5-212ENST00000636602 INTUQ9ULD6 942 aa5.47□□□□□ -1.53
CLN5-212ENST00000636602 LIMCH1Q9UPQ0 1083 aa5.47□□□□□ -1.53
CLN5-212ENST00000636602 PTPN22Q9Y2R2 807 aa5.47□□□□□ -1.53
CLN5-212ENST00000636602 H3BML4 177 aa5.46□□□□□ -1.54
CLN5-212ENST00000636602 GLRBP48167 497 aa5.46□□□□□ -1.54
CLN5-212ENST00000636602 ADRM1Q16186 407 aa5.46□□□□□ -1.54
CLN5-212ENST00000636602 SKIDA1Q1XH10 827 aa5.46□□□□□ -1.54
CLN5-212ENST00000636602 LONRF3Q496Y0 759 aa5.46□□□□□ -1.54
CLN5-212ENST00000636602 C10orf62Q5T681 223 aaPredicted RBP5.46□□□□□ -1.54
CLN5-212ENST00000636602 TSHZ1Q6ZSZ6 1077 aa5.46□□□□□ -1.54
CLN5-212ENST00000636602 HIST1H2AHQ96KK5 128 aa5.46□□□□□ -1.54
CLN5-212ENST00000636602 HIST1H2AJQ99878 128 aa5.46□□□□□ -1.54
CLN5-212ENST00000636602 ARPC5LQ9BPX5 153 aa5.46□□□□□ -1.54
CLN5-212ENST00000636602 BTBD2Q9BX70 525 aa5.46□□□□□ -1.54
CLN5-212ENST00000636602 PITHD1Q9GZP4 211 aaPredicted RBP5.46□□□□□ -1.54
CLN5-212ENST00000636602 DMRT3Q9NQL9 472 aa5.46□□□□□ -1.54
CLN5-212ENST00000636602 KCMF1Q9P0J7 381 aa5.46□□□□□ -1.54
CLN5-212ENST00000636602 ARHGAP20Q9P2F6 1191 aa5.46□□□□□ -1.54
CLN5-212ENST00000636602 A0A0A6YYJ9 748 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms