RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 HMGXB3Q12766 1538 aa18.88■□□□□ 0.61
CACNA1A-227ENST00000636549 KCNN4O15554 427 aa18.88■□□□□ 0.61
CACNA1A-227ENST00000636549 CAPN1P07384 714 aa18.88■□□□□ 0.61
CACNA1A-227ENST00000636549 SDC4P31431 198 aa18.88■□□□□ 0.61
CACNA1A-227ENST00000636549 CDC16Q13042 620 aa18.88■□□□□ 0.61
CACNA1A-227ENST00000636549 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.88■□□□□ 0.61
CACNA1A-227ENST00000636549 ARMC2Q8NEN0 867 aa18.88■□□□□ 0.61
CACNA1A-227ENST00000636549 SCG3Q8WXD2 468 aaKnown RBP18.88■□□□□ 0.61
CACNA1A-227ENST00000636549 USP44Q9H0E7 712 aa18.88■□□□□ 0.61
CACNA1A-227ENST00000636549 KDM4CQ9H3R0 1056 aa18.88■□□□□ 0.61
CACNA1A-227ENST00000636549 ABI2Q9NYB9 513 aaPredicted RBP18.88■□□□□ 0.61
CACNA1A-227ENST00000636549 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.88■□□□□ 0.61
CACNA1A-227ENST00000636549 TMEM94Q12767 1356 aa18.88■□□□□ 0.61
CACNA1A-227ENST00000636549 CYP7B1O75881 506 aa18.88■□□□□ 0.61
CACNA1A-227ENST00000636549 PAGE5Q96GU1 130 aa18.88■□□□□ 0.61
CACNA1A-227ENST00000636549 SCINQ9Y6U3 715 aa18.88■□□□□ 0.61
CACNA1A-227ENST00000636549 YY1P25490 414 aa18.87■□□□□ 0.61
CACNA1A-227ENST00000636549 PIGBQ92521 554 aa18.87■□□□□ 0.61
CACNA1A-227ENST00000636549 RSPH9Q9H1X1 276 aaPredicted RBP18.87■□□□□ 0.61
CACNA1A-227ENST00000636549 ABCC12Q96J65 1359 aa18.87■□□□□ 0.61
CACNA1A-227ENST00000636549 ACOT2P49753 483 aa18.87■□□□□ 0.61
CACNA1A-227ENST00000636549 ORC1Q13415 861 aa18.87■□□□□ 0.61
CACNA1A-227ENST00000636549 FAM49BQ9NUQ9 324 aa18.87■□□□□ 0.61
CACNA1A-227ENST00000636549 RASA4BC9J798 803 aa18.87■□□□□ 0.61
CACNA1A-227ENST00000636549 RASA4O43374 803 aa18.87■□□□□ 0.61
CACNA1A-227ENST00000636549 TOGARAM2Q6ZUX3 1019 aa18.87■□□□□ 0.61
CACNA1A-227ENST00000636549 BTBD6Q96KE9 485 aa18.87■□□□□ 0.61
CACNA1A-227ENST00000636549 APOA5Q6Q788 366 aa18.87■□□□□ 0.61
CACNA1A-227ENST00000636549 LMNAP02545 664 aaKnown RBP18.87■□□□□ 0.61
CACNA1A-227ENST00000636549 RWDD2BP57060 319 aa18.87■□□□□ 0.61
CACNA1A-227ENST00000636549 GRAMD4Q6IC98 578 aa18.87■□□□□ 0.61
CACNA1A-227ENST00000636549 BTNL9Q6UXG8 535 aa18.87■□□□□ 0.61
CACNA1A-227ENST00000636549 SRRM1Q8IYB3 904 aaKnown RBP18.87■□□□□ 0.61
CACNA1A-227ENST00000636549 ZBED8Q8IZ13 594 aa18.87■□□□□ 0.61
CACNA1A-227ENST00000636549 SLC30A5Q8TAD4 765 aa18.87■□□□□ 0.61
CACNA1A-227ENST00000636549 IPCEF1Q8WWN9 437 aaPredicted RBP18.87■□□□□ 0.61
CACNA1A-227ENST00000636549 TMA16Q96EY4 203 aaKnown RBP18.87■□□□□ 0.61
CACNA1A-227ENST00000636549 ZFYVE28Q9HCC9 887 aa18.87■□□□□ 0.61
CACNA1A-227ENST00000636549 PYCARDQ9ULZ3 195 aa18.87■□□□□ 0.61
CACNA1A-227ENST00000636549 PRG3Q9Y2Y8 225 aaPredicted RBP18.87■□□□□ 0.61
CACNA1A-227ENST00000636549 SYT2Q8N9I0 419 aaPredicted RBP18.86■□□□□ 0.61
CACNA1A-227ENST00000636549 FMO2Q99518 471 aa18.86■□□□□ 0.61
CACNA1A-227ENST00000636549 NDE1Q9NXR1 346 aa18.86■□□□□ 0.61
CACNA1A-227ENST00000636549 DGKIO75912 1065 aa18.86■□□□□ 0.61
CACNA1A-227ENST00000636549 LRRC36Q1X8D7 754 aa18.86■□□□□ 0.61
CACNA1A-227ENST00000636549 BZW1Q7L1Q6 419 aaKnown RBP18.86■□□□□ 0.61
CACNA1A-227ENST00000636549 EPM2AIP1Q7L775 607 aaPredicted RBP18.86■□□□□ 0.61
CACNA1A-227ENST00000636549 APOBEC3FQ8IUX4 373 aaKnown RBP18.86■□□□□ 0.61
CACNA1A-227ENST00000636549 FOPNLQ96NB1 174 aa18.86■□□□□ 0.61
CACNA1A-227ENST00000636549 C17orf80Q9BSJ5 609 aa18.86■□□□□ 0.61
CACNA1A-227ENST00000636549 ALDH1A2O94788 518 aa18.86■□□□□ 0.61
CACNA1A-227ENST00000636549 ACADMP11310 421 aa18.86■□□□□ 0.61
CACNA1A-227ENST00000636549 JAK3P52333 1124 aa18.86■□□□□ 0.61
CACNA1A-227ENST00000636549 BCL2L14Q9BZR8 327 aa18.86■□□□□ 0.61
CACNA1A-227ENST00000636549 TXLNGQ9NUQ3 528 aa18.86■□□□□ 0.61
CACNA1A-227ENST00000636549 RBAKQ9NYW8 714 aaPredicted RBP18.86■□□□□ 0.61
CACNA1A-227ENST00000636549 ALDH1A3P47895 512 aa18.86■□□□□ 0.61
CACNA1A-227ENST00000636549 UBA3Q8TBC4 463 aa18.86■□□□□ 0.61
CACNA1A-227ENST00000636549 CPA5Q8WXQ8 436 aa18.86■□□□□ 0.61
CACNA1A-227ENST00000636549 PLAAQ9Y263 795 aa18.86■□□□□ 0.61
CACNA1A-227ENST00000636549 CDH6P55285 790 aa18.86■□□□□ 0.61
CACNA1A-227ENST00000636549 PDIA2Q13087 525 aaKnown RBP18.86■□□□□ 0.61
CACNA1A-227ENST00000636549 NLRP10Q86W26 655 aa18.86■□□□□ 0.61
CACNA1A-227ENST00000636549 RBM41Q96IZ5 413 aaKnown RBP18.86■□□□□ 0.61
CACNA1A-227ENST00000636549 MRPL4Q9BYD3 311 aaKnown RBP18.86■□□□□ 0.61
CACNA1A-227ENST00000636549 BRD8Q9H0E9 1235 aa18.86■□□□□ 0.61
CACNA1A-227ENST00000636549 OSGEPL1Q9H4B0 414 aa18.86■□□□□ 0.61
CACNA1A-227ENST00000636549 CYP27B1O15528 508 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 SMARCA1P28370 1054 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 PHKG1Q16816 387 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 SNX9Q9Y5X1 595 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 H0Y626 953 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 FKBP9O95302 570 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 MMP1P03956 469 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 HUNKP57058 714 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 DEUP1Q05D60 604 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 CUL3Q13618 768 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 FUT11Q495W5 492 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 TMEM179Q6ZVK1 233 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 FKBP9P1Q75LS8 142 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 ADGRF4Q8IZF3 695 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 LRRC71Q8N4P6 559 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 GYG2O15488 501 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 DGKHQ86XP1 1220 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 TEX9Q8N6V9 391 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 HOXB7P09629 217 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 RASGRF1Q13972 1273 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 C10orf120Q5SQS8 335 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 CDR2LQ86X02 465 aaPredicted RBP18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 OTUB1Q96FW1 271 aaPredicted RBP18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 PALLDQ8WX93 1383 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 AOX1Q06278 1338 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 PRR23D1E9PI22 279 aaPredicted RBP18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 RPS6KA5O75582 802 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 PRR23D2P0DMB1 279 aaPredicted RBP18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 FOXP4Q8IVH2 680 aaPredicted RBP18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 UBE2Q2Q8WVN8 375 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 TBC1D19Q8N5T2 526 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 SH3TC2Q8TF17 1288 aa18.85■□□□□ 0.61
CACNA1A-227ENST00000636549 SPIRE2Q8WWL2 714 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms