RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-223ENST00000636306 POTEJP0CG39 1038 aa11.52□□□□□ -0.57
CHD2-223ENST00000636306 SLC1A4P43007 532 aa11.52□□□□□ -0.57
CHD2-223ENST00000636306 EIF6P56537 245 aaKnown RBP11.52□□□□□ -0.57
CHD2-223ENST00000636306 RASSF7Q02833 373 aa11.52□□□□□ -0.57
CHD2-223ENST00000636306 NFIAQ12857 509 aa11.52□□□□□ -0.57
CHD2-223ENST00000636306 AP3B2Q13367 1082 aa11.52□□□□□ -0.57
CHD2-223ENST00000636306 RPS6KA1Q15418 735 aa11.52□□□□□ -0.57
CHD2-223ENST00000636306 PPP2R5EQ16537 467 aa11.52□□□□□ -0.57
CHD2-223ENST00000636306 ABCB5Q2M3G0 1257 aa11.52□□□□□ -0.57
CHD2-223ENST00000636306 LIN52Q52LA3 116 aa11.52□□□□□ -0.57
CHD2-223ENST00000636306 SLFN13Q68D06 897 aa11.52□□□□□ -0.57
CHD2-223ENST00000636306 TTI2Q6NXR4 508 aa11.52□□□□□ -0.57
CHD2-223ENST00000636306 POTEEQ6S8J3 1075 aa11.52□□□□□ -0.57
CHD2-223ENST00000636306 NCCRP1Q6ZVX7 275 aaPredicted RBP11.52□□□□□ -0.57
CHD2-223ENST00000636306 TTLL6Q8N841 843 aa11.52□□□□□ -0.57
CHD2-223ENST00000636306 NEK9Q8TD19 979 aa11.52□□□□□ -0.57
CHD2-223ENST00000636306 C7orf43Q8WVR3 580 aa11.52□□□□□ -0.57
CHD2-223ENST00000636306 WDR60Q8WVS4 1066 aa11.52□□□□□ -0.57
CHD2-223ENST00000636306 GMCL1Q96IK5 515 aa11.52□□□□□ -0.57
CHD2-223ENST00000636306 CAMKK2Q96RR4 588 aa11.52□□□□□ -0.57
CHD2-223ENST00000636306 DDX23Q9BUQ8 820 aaKnown RBP11.52□□□□□ -0.57
CHD2-223ENST00000636306 TMEM60Q9H2L4 133 aa11.52□□□□□ -0.57
CHD2-223ENST00000636306 TLE6Q9H808 572 aa11.52□□□□□ -0.57
CHD2-223ENST00000636306 METTL14Q9HCE5 456 aaKnown RBP11.52□□□□□ -0.57
CHD2-223ENST00000636306 KBTBD4Q9NVX7 518 aa11.52□□□□□ -0.57
CHD2-223ENST00000636306 UTP6Q9NYH9 597 aaKnown RBP11.52□□□□□ -0.57
CHD2-223ENST00000636306 BIN2Q9UBW5 565 aaPredicted RBP11.52□□□□□ -0.57
CHD2-223ENST00000636306 SALL4Q9UJQ4 1053 aa11.52□□□□□ -0.57
CHD2-223ENST00000636306 STK24Q9Y6E0 443 aa11.52□□□□□ -0.57
CHD2-223ENST00000636306 MYH10P35580 1976 aa11.52□□□□□ -0.57
CHD2-223ENST00000636306 WDR46O15213 610 aaKnown RBP11.51□□□□□ -0.57
CHD2-223ENST00000636306 COBLO75128 1261 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 RHOBTB3O94955 611 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 PLEKP08567 350 aaPredicted RBP11.51□□□□□ -0.57
CHD2-223ENST00000636306 CPA3P15088 417 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 CHRNA5P30532 468 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 TNNI2P48788 182 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 CD97P48960 835 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 SERPINB8P50452 374 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 DENND2CQ68D51 928 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 SYN2Q92777 582 aaPredicted RBP11.51□□□□□ -0.57
CHD2-223ENST00000636306 CORO1BQ9BR76 489 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 PABPC3Q9H361 631 aaKnown RBP11.51□□□□□ -0.57
CHD2-223ENST00000636306 CPVLQ9H3G5 476 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 EPB41L1Q9H4G0 881 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 AZI2Q9H6S1 392 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 PICK1Q9NRD5 415 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 FAM198AQ9UFP1 575 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 INTUQ9ULD6 942 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 TRIM33Q9UPN9 1127 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 UTP11Q9Y3A2 253 aaKnown RBP11.51□□□□□ -0.57
CHD2-223ENST00000636306 ABCB11O95342 1321 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 PGRMC1O00264 195 aaKnown RBP11.51□□□□□ -0.57
CHD2-223ENST00000636306 DAPK3O43293 454 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 STRNO43815 780 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 MARCH6O60337 910 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 GNA14O95837 355 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 TROVE2P10155 538 aaKnown RBP eCLIP11.51□□□□□ -0.57
CHD2-223ENST00000636306 PLCG1P19174 1290 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 VCAM1P19320 739 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 FLT3P36888 993 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 HPCAP84074 193 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 TMEM62Q0P6H9 643 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 AP1B1Q10567 949 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 CCDC6Q16204 474 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 KRT79Q5XKE5 535 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 MFSD5Q6N075 450 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 CNNM4Q6P4Q7 775 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 MOXD1Q6UVY6 613 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 SEPT14Q6ZU15 432 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 INTS8Q75QN2 995 aaKnown RBP11.51□□□□□ -0.57
CHD2-223ENST00000636306 DDX42Q86XP3 938 aaKnown RBP eCLIP11.51□□□□□ -0.57
CHD2-223ENST00000636306 NELFCDQ8IXH7 590 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 OGFOD1Q8N543 542 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 CKAP2Q8WWK9 683 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 COA7Q96BR5 231 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 HAUS1Q96CS2 278 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 MTRQ99707 1265 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.51□□□□□ -0.575e-12■■■■□ 19.4
CHD2-223ENST00000636306 PPP1R12CQ9BZL4 782 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 ROPN1BQ9BZX4 212 aaPredicted RBP11.51□□□□□ -0.57
CHD2-223ENST00000636306 BLZF1Q9H2G9 400 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 PSTPIP2Q9H939 334 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 ROPN1Q9HAT0 212 aaPredicted RBP11.51□□□□□ -0.57
CHD2-223ENST00000636306 TMOD4Q9NZQ9 345 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 ATP8A1Q9Y2Q0 1164 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 CD2APQ9Y5K6 639 aa11.51□□□□□ -0.57
CHD2-223ENST00000636306 PASKQ96RG2 1323 aa11.5□□□□□ -0.57
CHD2-223ENST00000636306 SMIM31A0A1B0GVY4 71 aa11.5□□□□□ -0.57
CHD2-223ENST00000636306 TCP11X1B4DZS4 312 aa11.5□□□□□ -0.57
CHD2-223ENST00000636306 ADAMTS3O15072 1205 aa11.5□□□□□ -0.57
CHD2-223ENST00000636306 BUB1O43683 1085 aa11.5□□□□□ -0.57
CHD2-223ENST00000636306 PABPC4LP0CB38 370 aaKnown RBP11.5□□□□□ -0.57
CHD2-223ENST00000636306 EEF2P13639 858 aaKnown RBP11.5□□□□□ -0.57
CHD2-223ENST00000636306 CYP11B2P19099 503 aa11.5□□□□□ -0.57
CHD2-223ENST00000636306 MTIF2P46199 727 aaKnown RBP11.5□□□□□ -0.57
CHD2-223ENST00000636306 CLK2P49760 499 aaKnown RBP11.5□□□□□ -0.57
CHD2-223ENST00000636306 CDK7P50613 346 aa11.5□□□□□ -0.57
CHD2-223ENST00000636306 PMS2P54278 862 aa11.5□□□□□ -0.57
CHD2-223ENST00000636306 TCP10Q12799 353 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms