RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 TMEM132EQ6IEE7 984 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 RNF19BQ6ZMZ0 732 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 SPATA31D4Q6ZUB0 917 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 ITIH5Q86UX2 942 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 CREG2Q8IUH2 290 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 NELFCDQ8IXH7 590 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 ALDH16A1Q8IZ83 802 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 DPF3Q92784 378 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 FSD1Q9BTV5 496 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 NT5C3AQ9H0P0 336 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 AZI2Q9H6S1 392 aa6.48□□□□□ -1.37
CHD2-221ENST00000635856 PTCH1Q13635 1447 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 H7C0C1 242 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 GNPATO15228 680 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 LRPAP1P30533 357 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 AP3M2P53677 418 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 ERVK-24P63145 666 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 MRPS15P82914 257 aaKnown RBP6.47□□□□□ -1.37
CHD2-221ENST00000635856 FKBP4Q02790 459 aaKnown RBP eCLIP6.47□□□□□ -1.37
CHD2-221ENST00000635856 STX3Q13277 289 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 THOC5Q13769 683 aaKnown RBP6.47□□□□□ -1.37
CHD2-221ENST00000635856 GALNTL6Q49A17 601 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 ZC2HC1CQ53FD0 456 aaPredicted RBP6.47□□□□□ -1.37
CHD2-221ENST00000635856 RESP18Q5W5W9 173 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 FASTKD5Q7L8L6 764 aaKnown RBP6.47□□□□□ -1.37
CHD2-221ENST00000635856 MMAAQ8IVH4 418 aaKnown RBP6.47□□□□□ -1.37
CHD2-221ENST00000635856 KSR1Q8IVT5 923 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 ELMOD2Q8IZ81 293 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.47□□□□□ -1.37
CHD2-221ENST00000635856 ZNF317Q96PQ6 595 aaPredicted RBP6.47□□□□□ -1.37
CHD2-221ENST00000635856 LBHD1Q9BQE6 289 aaPredicted RBP6.47□□□□□ -1.37
CHD2-221ENST00000635856 IER2Q9BTL4 223 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 MRPS26Q9BYN8 205 aaKnown RBP6.47□□□□□ -1.37
CHD2-221ENST00000635856 ZMYND12Q9H0C1 365 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 TRPV6Q9H1D0 765 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 DENND2DQ9H6A0 471 aaPredicted RBP6.47□□□□□ -1.37
CHD2-221ENST00000635856 KIAA1586Q9HCI6 787 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 NLRC4Q9NPP4 1024 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 USP40Q9NVE5 1235 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 INTS13Q9NVM9 706 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 DBNLQ9UJU6 430 aaKnown RBP6.47□□□□□ -1.37
CHD2-221ENST00000635856 RASGRF2O14827 1237 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 KRT36O76013 467 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 GYPCP04921 128 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 GNA13Q14344 377 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 NFE2L1Q14494 772 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 MCM10Q7L590 875 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 ERI1Q8IV48 349 aaKnown RBP6.47□□□□□ -1.37
CHD2-221ENST00000635856 CCDC82Q8N4S0 544 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 LSMEM1Q8N8F7 131 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 VPS35Q96QK1 796 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 PDGFDQ9GZP0 370 aaPredicted RBP6.47□□□□□ -1.37
CHD2-221ENST00000635856 VPS37BQ9H9H4 285 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 RSL24D1Q9UHA3 163 aaKnown RBP6.47□□□□□ -1.37
CHD2-221ENST00000635856 NR2E3Q9Y5X4 410 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 CLIC4Q9Y696 253 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 SAMD9LQ8IVG5 1584 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 MOCS3O95396 460 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 CLK1P49759 484 aaKnown RBP6.47□□□□□ -1.37
CHD2-221ENST00000635856 DPYSQ14117 519 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 PLS1Q14651 629 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 INSCQ1MX18 579 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 PROSER3Q2NL68 480 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 EDRF1Q3B7T1 1238 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 GRAMD1BQ3KR37 738 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 HABP4Q5JVS0 413 aaKnown RBP6.47□□□□□ -1.37
CHD2-221ENST00000635856 FAM122CQ6P4D5 195 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 ASRGL1Q7L266 308 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 LPCAT2Q7L5N7 544 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 TMC7Q7Z402 723 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 CCDC28AQ8IWP9 274 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 GALNT4Q8N4A0 578 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 FITM2Q8N6M3 262 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 MIGA1Q8NAN2 632 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 CEP19Q96LK0 163 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 FMO2Q99518 471 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 CALN1Q9BXU9 219 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 GRIP2Q9C0E4 1043 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 TAB2Q9NYJ8 693 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 IL20Q9NYY1 176 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 MAN1B1Q9UKM7 699 aa6.47□□□□□ -1.37
CHD2-221ENST00000635856 NPHP3-ACAD11A0A0J9YXS1 232 aa6.46□□□□□ -1.37
CHD2-221ENST00000635856 POTEB3A0JP26 581 aa6.46□□□□□ -1.37
CHD2-221ENST00000635856 BTBD11A6QL63 1104 aa6.46□□□□□ -1.37
CHD2-221ENST00000635856 RNF113AO15541 343 aaKnown RBP6.46□□□□□ -1.37
CHD2-221ENST00000635856 EXTL3O43909 919 aa6.46□□□□□ -1.37
CHD2-221ENST00000635856 ECE2O60344 883 aa6.46□□□□□ -1.37
CHD2-221ENST00000635856 FOXD2O60548 495 aaPredicted RBP6.46□□□□□ -1.37
CHD2-221ENST00000635856 GABBR2O75899 941 aa6.46□□□□□ -1.37
CHD2-221ENST00000635856 RRM1P23921 792 aa6.46□□□□□ -1.37
CHD2-221ENST00000635856 NR1H2P55055 460 aa6.46□□□□□ -1.37
CHD2-221ENST00000635856 LRRC14Q15048 493 aa6.46□□□□□ -1.37
CHD2-221ENST00000635856 KLHL38Q2WGJ6 581 aa6.46□□□□□ -1.37
CHD2-221ENST00000635856 POTEBQ6S5H4 581 aa6.46□□□□□ -1.37
CHD2-221ENST00000635856 UNC5CLQ8IV45 518 aa6.46□□□□□ -1.37
CHD2-221ENST00000635856 SPATA5Q8NB90 893 aa6.46□□□□□ -1.37
CHD2-221ENST00000635856 ZFPM2Q8WW38 1151 aa6.46□□□□□ -1.37
CHD2-221ENST00000635856 RUBCNLQ9H714 662 aa6.46□□□□□ -1.37
CHD2-221ENST00000635856 WDR6Q9NNW5 1121 aaKnown RBP6.46□□□□□ -1.37
CHD2-221ENST00000635856 TBC1D14Q9P2M4 693 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms