RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 SSX2IPQ9Y2D8 614 aa20.14■□□□□ 0.81
CLN6-210ENST00000635747 CCDC169A6NNP5 214 aa20.13■□□□□ 0.81
CLN6-210ENST00000635747 HIP1RO75146 1068 aa20.13■□□□□ 0.81
CLN6-210ENST00000635747 ALADP13716 330 aa20.13■□□□□ 0.81
CLN6-210ENST00000635747 LIG1P18858 919 aa20.13■□□□□ 0.81
CLN6-210ENST00000635747 GUCY2CP25092 1073 aa20.13■□□□□ 0.81
CLN6-210ENST00000635747 UBA7P41226 1012 aa20.13■□□□□ 0.81
CLN6-210ENST00000635747 OR1G1P47890 313 aa20.13■□□□□ 0.81
CLN6-210ENST00000635747 PEX3P56589 373 aa20.13■□□□□ 0.81
CLN6-210ENST00000635747 GRIK3Q13003 919 aa20.13■□□□□ 0.81
CLN6-210ENST00000635747 DCAF4L1Q3SXM0 396 aa20.13■□□□□ 0.81
CLN6-210ENST00000635747 TPRNQ4KMQ1 711 aa20.13■□□□□ 0.81
CLN6-210ENST00000635747 C1orf186Q6ZWK4 172 aa20.13■□□□□ 0.81
CLN6-210ENST00000635747 CABP7Q86V35 215 aa20.13■□□□□ 0.81
CLN6-210ENST00000635747 PPFIBP1Q86W92 1011 aa20.13■□□□□ 0.81
CLN6-210ENST00000635747 SYT2Q8N9I0 419 aaPredicted RBP20.13■□□□□ 0.81
CLN6-210ENST00000635747 BCL7CQ8WUZ0 217 aaPredicted RBP20.13■□□□□ 0.81
CLN6-210ENST00000635747 COLEC11Q9BWP8 271 aa20.13■□□□□ 0.81
CLN6-210ENST00000635747 EMILIN2Q9BXX0 1053 aa20.13■□□□□ 0.81
CLN6-210ENST00000635747 TMEM134Q9H6X4 195 aa20.13■□□□□ 0.81
CLN6-210ENST00000635747 PI4K2BG5E9Z4 385 aa20.12■□□□□ 0.81
CLN6-210ENST00000635747 B4GALT3O60512 393 aa20.12■□□□□ 0.81
CLN6-210ENST00000635747 CLASP2O75122 1294 aaKnown RBP20.12■□□□□ 0.81
CLN6-210ENST00000635747 LONP1P36776 959 aaKnown RBP20.12■□□□□ 0.81
CLN6-210ENST00000635747 NPTX2P47972 431 aa20.12■□□□□ 0.81
CLN6-210ENST00000635747 LLGL2Q6P1M3 1020 aa20.12■□□□□ 0.81
CLN6-210ENST00000635747 KCNK18Q7Z418 384 aa20.12■□□□□ 0.81
CLN6-210ENST00000635747 CALML4Q96GE6 196 aa20.12■□□□□ 0.81
CLN6-210ENST00000635747 RUSC1Q9BVN2 902 aa20.12■□□□□ 0.81
CLN6-210ENST00000635747 POLD4Q9HCU8 107 aa20.12■□□□□ 0.81
CLN6-210ENST00000635747 KMT5AQ9NQR1 393 aa20.12■□□□□ 0.81
CLN6-210ENST00000635747 MRPL17Q9NRX2 175 aaKnown RBP20.12■□□□□ 0.81
CLN6-210ENST00000635747 MIOSQ9NXC5 875 aa20.12■□□□□ 0.81
CLN6-210ENST00000635747 USP15Q9Y4E8 981 aaPredicted RBP20.12■□□□□ 0.81
CLN6-210ENST00000635747 HCFC2Q9Y5Z7 792 aa20.12■□□□□ 0.81
CLN6-210ENST00000635747 SOD2P04179 222 aa20.11■□□□□ 0.81
CLN6-210ENST00000635747 RBM10P98175 930 aaKnown RBP20.11■□□□□ 0.81
CLN6-210ENST00000635747 ATF7IP2Q5U623 682 aa20.11■□□□□ 0.81
CLN6-210ENST00000635747 GSTCDQ8NEC7 633 aa20.11■□□□□ 0.81
CLN6-210ENST00000635747 PNMA5Q96PV4 448 aa20.11■□□□□ 0.81
CLN6-210ENST00000635747 KIFC3Q9BVG8 833 aa20.11■□□□□ 0.81
CLN6-210ENST00000635747 DZANK1Q9NVP4 752 aa20.11■□□□□ 0.81
CLN6-210ENST00000635747 PRG3Q9Y2Y8 225 aaPredicted RBP20.11■□□□□ 0.81
CLN6-210ENST00000635747 TTLL13PA6NNM8 815 aa20.1■□□□□ 0.81
CLN6-210ENST00000635747 K7ELQ4 463 aaPredicted RBP20.1■□□□□ 0.81
CLN6-210ENST00000635747 SSBP05455 408 aaKnown RBP eCLIP20.1■□□□□ 0.81
CLN6-210ENST00000635747 PLA2G4BP0C869 781 aa20.1■□□□□ 0.81
CLN6-210ENST00000635747 SYT1P21579 422 aa20.1■□□□□ 0.81
CLN6-210ENST00000635747 SMTNP53814 917 aa20.1■□□□□ 0.81
CLN6-210ENST00000635747 ITIH3Q06033 890 aa20.1■□□□□ 0.81
CLN6-210ENST00000635747 SF3A1Q15459 793 aaKnown RBP20.1■□□□□ 0.81
CLN6-210ENST00000635747 PTPN14Q15678 1187 aa20.1■□□□□ 0.81
CLN6-210ENST00000635747 TMEM119Q4V9L6 283 aa20.1■□□□□ 0.81
CLN6-210ENST00000635747 CES5AQ6NT32 575 aa20.1■□□□□ 0.81
CLN6-210ENST00000635747 DAW1Q8N136 415 aa20.1■□□□□ 0.81
CLN6-210ENST00000635747 AUTS2Q8WXX7 1259 aa20.1■□□□□ 0.81
CLN6-210ENST00000635747 SUSD6Q92537 303 aa20.1■□□□□ 0.81
CLN6-210ENST00000635747 NTPCRQ9BSD7 190 aaKnown RBP20.1■□□□□ 0.81
CLN6-210ENST00000635747 PHF7Q9BWX1 381 aaPredicted RBP20.1■□□□□ 0.81
CLN6-210ENST00000635747 VN1R3Q9BXE9 311 aa20.1■□□□□ 0.81
CLN6-210ENST00000635747 S1PR5Q9H228 398 aa20.1■□□□□ 0.81
CLN6-210ENST00000635747 EPHX3Q9H6B9 360 aa20.1■□□□□ 0.81
CLN6-210ENST00000635747 SNTG2Q9NY99 539 aa20.1■□□□□ 0.81
CLN6-210ENST00000635747 KLK14Q9P0G3 267 aa20.1■□□□□ 0.81
CLN6-210ENST00000635747 ARHGAP28Q9P2N2 729 aa20.1■□□□□ 0.81
CLN6-210ENST00000635747 TNFSF13BQ9Y275 285 aa20.1■□□□□ 0.81
CLN6-210ENST00000635747 URODP06132 367 aa20.09■□□□□ 0.81
CLN6-210ENST00000635747 THP07101 528 aa20.09■□□□□ 0.81
CLN6-210ENST00000635747 SLC12A3P55017 1021 aa20.09■□□□□ 0.81
CLN6-210ENST00000635747 MAPK7Q13164 816 aa20.09■□□□□ 0.81
CLN6-210ENST00000635747 TUSC3Q13454 348 aa20.09■□□□□ 0.81
CLN6-210ENST00000635747 NT5DC1Q5TFE4 455 aa20.09■□□□□ 0.81
CLN6-210ENST00000635747 SYCE2Q6PIF2 218 aa20.09■□□□□ 0.81
CLN6-210ENST00000635747 GPR65Q8IYL9 337 aa20.09■□□□□ 0.81
CLN6-210ENST00000635747 SPIRE2Q8WWL2 714 aa20.09■□□□□ 0.81
CLN6-210ENST00000635747 PLIN2Q99541 437 aa20.09■□□□□ 0.81
CLN6-210ENST00000635747 HERC2P3Q9BVR0 1158 aa20.09■□□□□ 0.81
CLN6-210ENST00000635747 MRPL4Q9BYD3 311 aaKnown RBP20.09■□□□□ 0.81
CLN6-210ENST00000635747 MARCH5Q9NX47 278 aa20.09■□□□□ 0.81
CLN6-210ENST00000635747 H0YCG3 227 aa20.08■□□□□ 0.81
CLN6-210ENST00000635747 DCXO43602 365 aa20.08■□□□□ 0.81
CLN6-210ENST00000635747 RECQL4O94761 1208 aa20.08■□□□□ 0.81
CLN6-210ENST00000635747 PLS3P13797 630 aa20.08■□□□□ 0.81
CLN6-210ENST00000635747 STRN3Q13033 797 aa20.08■□□□□ 0.81
CLN6-210ENST00000635747 CBX2Q14781 532 aaPredicted RBP20.08■□□□□ 0.81
CLN6-210ENST00000635747 EEF1DP3Q658K8 133 aa20.08■□□□□ 0.81
CLN6-210ENST00000635747 RASSF8Q8NHQ8 419 aa20.08■□□□□ 0.81
CLN6-210ENST00000635747 KHSRPQ92945 711 aaKnown RBP eCLIP20.08■□□□□ 0.818e-8■□□□□ 8.3
CLN6-210ENST00000635747 NECTIN4Q96NY8 510 aa20.08■□□□□ 0.81
CLN6-210ENST00000635747 ACO2Q99798 780 aaKnown RBP20.08■□□□□ 0.81
CLN6-210ENST00000635747 LARSQ9P2J5 1176 aaKnown RBP20.08■□□□□ 0.81
CLN6-210ENST00000635747 DPP7Q9UHL4 492 aa20.08■□□□□ 0.81
CLN6-210ENST00000635747 LOC730098B7Z3J9 87 aa20.07■□□□□ 0.8
CLN6-210ENST00000635747 GPR37L1O60883 481 aa20.07■□□□□ 0.8
CLN6-210ENST00000635747 LILRB3O75022 631 aa20.07■□□□□ 0.8
CLN6-210ENST00000635747 EFEMP2O95967 443 aa20.07■□□□□ 0.8
CLN6-210ENST00000635747 EDN1P05305 212 aa20.07■□□□□ 0.8
CLN6-210ENST00000635747 SCP2P22307 547 aa20.07■□□□□ 0.8
CLN6-210ENST00000635747 KLRC2P26717 231 aa20.07■□□□□ 0.8
CLN6-210ENST00000635747 GLUD2P49448 558 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms