RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 CACNA2D1P54289 1103 aa1.64□□□□□ -2.15
SMARCB1-209ENST00000635578 WNT3AP56704 352 aa1.64□□□□□ -2.15
SMARCB1-209ENST00000635578 OCA2Q04671 838 aa1.64□□□□□ -2.15
SMARCB1-209ENST00000635578 FHL1Q13642 323 aa1.64□□□□□ -2.15
SMARCB1-209ENST00000635578 EZH2Q15910 746 aaKnown RBP1.64□□□□□ -2.15
SMARCB1-209ENST00000635578 MAN2A1Q16706 1144 aa1.64□□□□□ -2.15
SMARCB1-209ENST00000635578 MTERF2Q49AM1 385 aa1.64□□□□□ -2.15
SMARCB1-209ENST00000635578 RUSC1-AS1Q66K80 236 aa1.64□□□□□ -2.15
SMARCB1-209ENST00000635578 ANKS6Q68DC2 871 aa1.64□□□□□ -2.15
SMARCB1-209ENST00000635578 EFCAB12Q6NXP0 572 aa1.64□□□□□ -2.15
SMARCB1-209ENST00000635578 ABHD17CQ6PCB6 329 aa1.64□□□□□ -2.15
SMARCB1-209ENST00000635578 BTNL9Q6UXG8 535 aa1.64□□□□□ -2.15
SMARCB1-209ENST00000635578 CRELD2Q6UXH1 353 aaPredicted RBP1.64□□□□□ -2.15
SMARCB1-209ENST00000635578 UNQ6494/PRO21346Q6UXR6 183 aa1.64□□□□□ -2.15
SMARCB1-209ENST00000635578 GPR149Q86SP6 731 aa1.64□□□□□ -2.15
SMARCB1-209ENST00000635578 C7orf31Q8N865 590 aa1.64□□□□□ -2.15
SMARCB1-209ENST00000635578 ZBTB38Q8NAP3 1195 aaPredicted RBP1.64□□□□□ -2.15
SMARCB1-209ENST00000635578 TFAP2CQ92754 450 aa1.64□□□□□ -2.15
SMARCB1-209ENST00000635578 FERMT2Q96AC1 680 aa1.64□□□□□ -2.15
SMARCB1-209ENST00000635578 RNF31Q96EP0 1072 aa1.64□□□□□ -2.15
SMARCB1-209ENST00000635578 DRC1Q96MC2 740 aa1.64□□□□□ -2.15
SMARCB1-209ENST00000635578 C8orf37Q96NL8 207 aa1.64□□□□□ -2.15
SMARCB1-209ENST00000635578 NEU1Q99519 415 aa1.64□□□□□ -2.15
SMARCB1-209ENST00000635578 SOX7Q9BT81 388 aa1.64□□□□□ -2.15
SMARCB1-209ENST00000635578 MYL10Q9BUA6 226 aa1.64□□□□□ -2.15
SMARCB1-209ENST00000635578 CASS4Q9NQ75 786 aa1.64□□□□□ -2.15
SMARCB1-209ENST00000635578 KMT5AQ9NQR1 393 aa1.64□□□□□ -2.15
SMARCB1-209ENST00000635578 MRPS23Q9Y3D9 190 aaKnown RBP1.64□□□□□ -2.15
SMARCB1-209ENST00000635578 NESP48681 1621 aa1.64□□□□□ -2.15
SMARCB1-209ENST00000635578 TSPOAP1O95153 1857 aa1.64□□□□□ -2.15
SMARCB1-209ENST00000635578 EIF4G3O43432 1585 aaKnown RBP1.64□□□□□ -2.15
SMARCB1-209ENST00000635578 POLR2AP24928 1970 aaKnown RBP1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 RIMBP3CA6NJZ7 1639 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 RIMBP3BA6NNM3 1639 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 RIMBP3Q9UFD9 1639 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 LOC101059915A0A1B0GWI6 518 aaPredicted RBP1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 DIRC3C9JPN6 131 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 PDPK1O15530 556 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 KLF4O43474 513 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 CLEC2LP0C7M8 214 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 RBP3P10745 1247 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 CHN2P52757 468 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 CD69Q07108 199 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 SCAPQ12770 1279 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 RAB33AQ14088 237 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 BMS1Q14692 1282 aaKnown RBP1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 SPDYE7PQ495Y7 208 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 LCE1EQ5T753 118 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 FAM102AQ5T9C2 384 aaPredicted RBP1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 SOGA3Q5TF21 947 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 TIGD7Q6NT04 549 aaPredicted RBP1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 GPRIN1Q7Z2K8 1008 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 MSL3Q8N5Y2 521 aaKnown RBP1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 KIAA1958Q8N8K9 716 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 OR56A1Q8NGH5 318 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 SREK1Q8WXA9 508 aaKnown RBP1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 DPF1Q92782 380 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 SCLYQ96I15 445 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 HIST1H2AHQ96KK5 128 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 FCRL4Q96PJ5 515 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 GMLQ99445 158 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 HIST1H2AJQ99878 128 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 HEPHQ9BQS7 1158 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 ZSWIM1Q9BR11 485 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 AIFM2Q9BRQ8 373 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 DHRS4Q9BTZ2 278 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 OSBPL6Q9BZF3 934 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 PITHD1Q9GZP4 211 aaPredicted RBP1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 ZSWIM4Q9H7M6 989 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 CPNE5Q9HCH3 593 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 IGSF5Q9NSI5 407 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 FOXJ2Q9P0K8 574 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 SIRPGQ9P1W8 387 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 SLC17A6Q9P2U8 582 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 CLCA2Q9UQC9 943 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 NOX1Q9Y5S8 564 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 KDM2BQ8NHM5 1336 aa1.63□□□□□ -2.15
SMARCB1-209ENST00000635578 ZMYM3Q14202 1370 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 TCRBV16S1A1N1A0A5B0 115 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 B5MCH6 92 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 H7C1D1 291 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 M0R2C6 588 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 TP73O15350 636 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 MAFGO15525 162 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 KCNAB3O43448 404 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 PRPF6O94906 941 aaKnown RBP1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 LY86O95711 162 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 CFIP05156 583 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 CELA2AP08217 269 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 MGAT1P26572 445 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 APBA1Q02410 837 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 EPHA7Q15375 998 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 ETFDHQ16134 617 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 MTX3Q5HYI7 312 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 KIAA1841Q6NSI8 718 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 ESRP1Q6NXG1 681 aaKnown RBP1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 DRICH1Q6PGQ1 229 aaPredicted RBP1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 OTOP1Q7RTM1 612 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 FGD2Q7Z6J4 655 aa1.62□□□□□ -2.15
SMARCB1-209ENST00000635578 AMIGO2Q86SJ2 522 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms