RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 IPO9Q96P70 1041 aaKnown RBP3.39□□□□□ -1.87
SMARCB1-208ENST00000634926 MRPL4Q9BYD3 311 aaKnown RBP3.39□□□□□ -1.87
SMARCB1-208ENST00000634926 KRTAP2-2Q9BYT5 123 aa3.39□□□□□ -1.87
SMARCB1-208ENST00000634926 TOR3AQ9H497 397 aa3.39□□□□□ -1.87
SMARCB1-208ENST00000634926 ZNF768Q9H5H4 540 aaKnown RBP3.39□□□□□ -1.87
SMARCB1-208ENST00000634926 TYW1Q9NV66 732 aaKnown RBP3.39□□□□□ -1.87
SMARCB1-208ENST00000634926 UCKL1Q9NWZ5 548 aa3.39□□□□□ -1.87
SMARCB1-208ENST00000634926 TESQ9UGI8 421 aaKnown RBP3.39□□□□□ -1.87
SMARCB1-208ENST00000634926 FBXO10Q9UK96 956 aa3.39□□□□□ -1.87
SMARCB1-208ENST00000634926 FZD1Q9UP38 647 aa3.39□□□□□ -1.87
SMARCB1-208ENST00000634926 SRPK3Q9UPE1 567 aa3.39□□□□□ -1.87
SMARCB1-208ENST00000634926 MRPS23Q9Y3D9 190 aaKnown RBP3.39□□□□□ -1.87
SMARCB1-208ENST00000634926 MSH6P52701 1360 aa3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 KANK1Q14678 1352 aa3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 RGS12O14924 1447 aa3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 KIF1BO60333 1816 aa3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 A0A087X0B3 334 aa3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 PROB1E7EW31 1015 aa3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 KCNK3O14649 394 aa3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 KCNQ2O43526 872 aa3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 LPXNO60711 386 aa3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 ABHD16AO95870 558 aa3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 ITGB1P05556 798 aa3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 CDK4P11802 303 aa3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 PABPC1P11940 636 aaKnown RBP3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 SUMO1P63165 101 aaKnown RBP3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 ELAVL1Q15717 326 aaKnown RBP3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 KIZQ2M2Z5 673 aa3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 FAM209AQ5JX71 171 aa3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 STRIP1Q5VSL9 837 aa3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 YOD1Q5VVQ6 348 aaPredicted RBP3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 FBXO42Q6P3S6 717 aa3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 RSPO2Q6UXX9 243 aaPredicted RBP3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 Q6YL49 198 aa3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 HTR3DQ70Z44 454 aa3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 THNSL2Q86YJ6 484 aa3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 ELOA2Q8IYF1 753 aaPredicted RBP3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 MNTQ99583 582 aa3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 BTBD2Q9BX70 525 aa3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 KRTAP1-5Q9BYS1 174 aa3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 ALG13Q9NP73 1137 aaKnown RBP3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 RRP7BPQ9NSQ0 103 aa3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 INTS7Q9NVH2 962 aaKnown RBP3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 SLC52A1Q9NWF4 448 aa3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 DDX56Q9NY93 547 aaKnown RBP3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 MYOM2P54296 1465 aa3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 COL11A2P13942 1736 aaPredicted RBP3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 CRYBG1Q9Y4K1 1723 aa3.38□□□□□ -1.87
SMARCB1-208ENST00000634926 TECPR2O15040 1411 aa3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 RRBP1Q9P2E9 1410 aaKnown RBP3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 PXDNQ92626 1479 aa3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 FMN2Q9NZ56 1722 aa3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 CENPVL1A0A0U1RR11 272 aa3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 C2orf78A6NCI8 922 aa3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 PRODHO43272 600 aa3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 MYCLP1P12525 358 aaPredicted RBP3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 ECE1P42892 770 aa3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 PTPAQ15257 358 aa3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 C21orf62-AS1Q17RA5 79 aa3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 TRIM61Q5EBN2 209 aa3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 NSMFQ6X4W1 530 aa3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 ARHGAP36Q6ZRI8 547 aa3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 LRRC55Q6ZSA7 311 aa3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 PTRH1Q86Y79 214 aaKnown RBP3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 DHX37Q8IY37 1157 aaKnown RBP3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 GSPT2Q8IYD1 628 aaKnown RBP3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 C9orf106Q8NAJ2 232 aa3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 CHAC2Q8WUX2 184 aa3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 STAG1Q8WVM7 1258 aa3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 OSBP2Q969R2 916 aa3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 RPL10LQ96L21 214 aaKnown RBP3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 CLUHP3Q96NS8 147 aa3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 CAAP1Q9H8G2 361 aa3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 MAGEL2Q9UJ55 1249 aa3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 MAPRE3Q9UPY8 281 aa3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 FRMD4BQ9Y2L6 1034 aa3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 NUB1Q9Y5A7 615 aa3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 SPATA31A6Q5VVP1 1343 aa3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 METP08581 1390 aa3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 PNPLA6Q8IY17 1366 aa3.37□□□□□ -1.87
SMARCB1-208ENST00000634926 NRAPQ86VF7 1730 aa3.36□□□□□ -1.87
SMARCB1-208ENST00000634926 C1orf167Q5SNV9 1468 aa3.36□□□□□ -1.87
SMARCB1-208ENST00000634926 UBE2QL1A1L167 161 aa3.36□□□□□ -1.87
SMARCB1-208ENST00000634926 B3GALT2O43825 422 aa3.36□□□□□ -1.87
SMARCB1-208ENST00000634926 MARCH6O60337 910 aa3.36□□□□□ -1.87
SMARCB1-208ENST00000634926 PDE8AO60658 829 aa3.36□□□□□ -1.87
SMARCB1-208ENST00000634926 PDGFRBP09619 1106 aa3.36□□□□□ -1.87
SMARCB1-208ENST00000634926 TYRP1P17643 537 aa3.36□□□□□ -1.87
SMARCB1-208ENST00000634926 POU3F3P20264 500 aaPredicted RBP3.36□□□□□ -1.87
SMARCB1-208ENST00000634926 CNGA1P29973 690 aa3.36□□□□□ -1.87
SMARCB1-208ENST00000634926 SOX5P35711 763 aa3.36□□□□□ -1.87
SMARCB1-208ENST00000634926 GPR85P60893 370 aa3.36□□□□□ -1.87
SMARCB1-208ENST00000634926 PLEKHG6Q3KR16 790 aa3.36□□□□□ -1.87
SMARCB1-208ENST00000634926 LY6G5CQ5SRR4 150 aa3.36□□□□□ -1.87
SMARCB1-208ENST00000634926 SP5Q6BEB4 398 aaPredicted RBP3.36□□□□□ -1.87
SMARCB1-208ENST00000634926 FSTL4Q6MZW2 842 aa3.36□□□□□ -1.87
SMARCB1-208ENST00000634926 KCNV1Q6PIU1 500 aa3.36□□□□□ -1.87
SMARCB1-208ENST00000634926 FAM111BQ6SJ93 734 aa3.36□□□□□ -1.87
SMARCB1-208ENST00000634926 BRINP3Q76B58 766 aa3.36□□□□□ -1.87
SMARCB1-208ENST00000634926 RNF180Q86T96 592 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms