RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 NRBP2Q9NSY0 501 aa7.76□□□□□ -1.17
BRCA1-230ENST00000634433 HSPBP1Q9NZL4 362 aa7.76□□□□□ -1.17
BRCA1-230ENST00000634433 BTBD7Q9P203 1132 aa7.76□□□□□ -1.17
BRCA1-230ENST00000634433 TBX20Q9UMR3 447 aa7.76□□□□□ -1.17
BRCA1-230ENST00000634433 FHOD1Q9Y613 1164 aa7.76□□□□□ -1.17
BRCA1-230ENST00000634433 ATP8B1O43520 1251 aa7.75□□□□□ -1.17
BRCA1-230ENST00000634433 NPTX2P47972 431 aa7.75□□□□□ -1.17
BRCA1-230ENST00000634433 NAP1L1P55209 391 aaKnown RBP7.75□□□□□ -1.17
BRCA1-230ENST00000634433 JAM2P57087 298 aa7.75□□□□□ -1.17
BRCA1-230ENST00000634433 PRKCEQ02156 737 aa7.75□□□□□ -1.17
BRCA1-230ENST00000634433 ARID5AQ03989 594 aa7.75□□□□□ -1.17
BRCA1-230ENST00000634433 GFPT1Q06210 699 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-230ENST00000634433 FAM160B1Q5W0V3 765 aa7.75□□□□□ -1.17
BRCA1-230ENST00000634433 PLA2G4FQ68DD2 849 aa7.75□□□□□ -1.17
BRCA1-230ENST00000634433 TMCO3Q6UWJ1 677 aa7.75□□□□□ -1.17
BRCA1-230ENST00000634433 MAP4K3Q8IVH8 894 aa7.75□□□□□ -1.17
BRCA1-230ENST00000634433 LRRN4CLQ8ND94 238 aa7.75□□□□□ -1.17
BRCA1-230ENST00000634433 TMEM161BQ8NDZ6 487 aa7.75□□□□□ -1.17
BRCA1-230ENST00000634433 INTS2Q9H0H0 1204 aaKnown RBP7.75□□□□□ -1.17
BRCA1-230ENST00000634433 ASCC2Q9H1I8 757 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-230ENST00000634433 SIX2Q9NPC8 291 aa7.75□□□□□ -1.17
BRCA1-230ENST00000634433 AVENQ9NQS1 362 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-230ENST00000634433 ZNF302Q9NR11 478 aa7.75□□□□□ -1.17
BRCA1-230ENST00000634433 SEPT9Q9UHD8 586 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-230ENST00000634433 CEP350Q5VT06 3117 aa7.75□□□□□ -1.17
BRCA1-230ENST00000634433 KIAA0391O15091 583 aaKnown RBP7.75□□□□□ -1.17
BRCA1-230ENST00000634433 ZNF862O60290 1169 aa7.75□□□□□ -1.17
BRCA1-230ENST00000634433 DNAJC6O75061 913 aa7.75□□□□□ -1.17
BRCA1-230ENST00000634433 STBD1O95210 358 aa7.75□□□□□ -1.17
BRCA1-230ENST00000634433 TCP1P17987 556 aaKnown RBP7.75□□□□□ -1.17
BRCA1-230ENST00000634433 EDNRBP24530 442 aa7.75□□□□□ -1.17
BRCA1-230ENST00000634433 MCM3P25205 808 aa7.75□□□□□ -1.17
BRCA1-230ENST00000634433 BRD3Q15059 726 aa7.75□□□□□ -1.17
BRCA1-230ENST00000634433 ZNF394Q53GI3 561 aa7.75□□□□□ -1.17
BRCA1-230ENST00000634433 LMBRD2Q68DH5 695 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-230ENST00000634433 FBXO38Q6PIJ6 1188 aa7.75□□□□□ -1.17
BRCA1-230ENST00000634433 CYFIP1Q7L576 1253 aa7.75□□□□□ -1.17
BRCA1-230ENST00000634433 TMUB1Q9BVT8 246 aa7.75□□□□□ -1.17
BRCA1-230ENST00000634433 PCIF1Q9H4Z3 704 aa7.75□□□□□ -1.17
BRCA1-230ENST00000634433 KIAA1586Q9HCI6 787 aa7.75□□□□□ -1.17
BRCA1-230ENST00000634433 PDLIM7Q9NR12 457 aa7.75□□□□□ -1.17
BRCA1-230ENST00000634433 OGFRQ9NZT2 677 aa7.75□□□□□ -1.17
BRCA1-230ENST00000634433 APEX2Q9UBZ4 518 aa7.75□□□□□ -1.17
BRCA1-230ENST00000634433 IGSF9BQ9UPX0 1349 aa7.75□□□□□ -1.17
BRCA1-230ENST00000634433 DENND3A2RUS2 1198 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 BPNT1O95861 308 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 ATP1A1P05023 1023 aaKnown RBP7.74□□□□□ -1.17
BRCA1-230ENST00000634433 GARTP22102 1010 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 GTF2H1P32780 548 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 SOX5P35711 763 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 POLGP54098 1239 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-230ENST00000634433 CNTN2Q02246 1040 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 NAB2Q15742 525 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 BRDTQ58F21 947 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-230ENST00000634433 CCDC70Q6NSX1 233 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 SEPT14Q6ZU15 432 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 CCDC60Q8IWA6 550 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-230ENST00000634433 RDH13Q8NBN7 331 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 CAGE1Q8TC20 777 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 LMBR1Q8WVP7 490 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 KCNN1Q92952 543 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 MROH8Q9H579 483 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 GPRC5CQ9NQ84 441 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 RNF14Q9UBS8 474 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 ADAMTS1Q9UHI8 967 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 DNAJC12Q9UKB3 198 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 USP20Q9Y2K6 914 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 HYOU1Q9Y4L1 999 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 DUSP10Q9Y6W6 482 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 CCDC85CA6NKD9 419 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 LGR5O75473 907 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 ERLIN1O75477 346 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 MOCS3O95396 460 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 OATP04181 439 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 CNGA1P29973 690 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 CDKN1CP49918 316 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-230ENST00000634433 SP4Q02446 784 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 PTK2Q05397 1052 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 SNAPC2Q13487 334 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 KIAA0753Q2KHM9 967 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 PRPF38BQ5VTL8 546 aaKnown RBP7.74□□□□□ -1.17
BRCA1-230ENST00000634433 TRMT1LQ7Z2T5 733 aaKnown RBP7.74□□□□□ -1.17
BRCA1-230ENST00000634433 ZNF571Q7Z3V5 609 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-230ENST00000634433 SEPT1Q8WYJ6 367 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 FAM167AQ96KS9 214 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 FAM81BQ96LP2 452 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 NIFKQ9BYG3 293 aaKnown RBP7.74□□□□□ -1.17
BRCA1-230ENST00000634433 PNMA3Q9UL41 463 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 SNX12Q9UMY4 172 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 LZTS1Q9Y250 596 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 EMSYQ7Z589 1322 aa7.74□□□□□ -1.17
BRCA1-230ENST00000634433 A0A087X0T9 212 aa7.73□□□□□ -1.17
BRCA1-230ENST00000634433 IGKV6D-21A0A0A0MT36 114 aa7.73□□□□□ -1.17
BRCA1-230ENST00000634433 TMEM150BA6NC51 233 aa7.73□□□□□ -1.17
BRCA1-230ENST00000634433 SOWAHBA6NEL2 793 aa7.73□□□□□ -1.17
BRCA1-230ENST00000634433 VGLL3A8MV65 326 aa7.73□□□□□ -1.17
BRCA1-230ENST00000634433 ENC1O14682 589 aa7.73□□□□□ -1.17
BRCA1-230ENST00000634433 FAM228BP0C875 321 aa7.73□□□□□ -1.17
BRCA1-230ENST00000634433 FAM200BP0CF97 657 aa7.73□□□□□ -1.17
BRCA1-230ENST00000634433 TRIM49P0CI25 452 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms