RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 SHC3Q92529 594 aa6.02□□□□□ -1.45
NEK3-211ENST00000629912 ZNF516Q92618 1163 aa6.02□□□□□ -1.45
NEK3-211ENST00000629912 DHX38Q92620 1227 aaKnown RBP6.02□□□□□ -1.45
NEK3-211ENST00000629912 RUBCNQ92622 972 aa6.02□□□□□ -1.45
NEK3-211ENST00000629912 SEMA4DQ92854 862 aa6.02□□□□□ -1.45
NEK3-211ENST00000629912 TMEM143Q96AN5 459 aa6.02□□□□□ -1.45
NEK3-211ENST00000629912 PBKQ96KB5 322 aa6.02□□□□□ -1.45
NEK3-211ENST00000629912 KIFC3Q9BVG8 833 aa6.02□□□□□ -1.45
NEK3-211ENST00000629912 PACSIN1Q9BY11 444 aa6.02□□□□□ -1.45
NEK3-211ENST00000629912 ISCUQ9H1K1 167 aa6.02□□□□□ -1.45
NEK3-211ENST00000629912 EPC1Q9H2F5 836 aa6.02□□□□□ -1.45
NEK3-211ENST00000629912 SMARCAD1Q9H4L7 1026 aa6.02□□□□□ -1.45
NEK3-211ENST00000629912 AZI2Q9H6S1 392 aa6.02□□□□□ -1.45
NEK3-211ENST00000629912 ABCB6Q9NP58 842 aa6.02□□□□□ -1.45
NEK3-211ENST00000629912 ARFGAP3Q9NP61 516 aa6.02□□□□□ -1.45
NEK3-211ENST00000629912 RAB20Q9NX57 234 aa6.02□□□□□ -1.45
NEK3-211ENST00000629912 AGO2Q9UKV8 859 aaKnown RBP6.02□□□□□ -1.45
NEK3-211ENST00000629912 STXBP5LQ9Y2K9 1186 aa6.02□□□□□ -1.45
NEK3-211ENST00000629912 PLXNA1Q9UIW2 1896 aa6.02□□□□□ -1.45
NEK3-211ENST00000629912 NCANO14594 1321 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 ADGRA2Q96PE1 1338 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 ANKRD62A6NC57 917 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 ZBTB42B2RXF5 422 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 PDHXO00330 501 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 MAP2K7O14733 419 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 HNRNPDLO14979 420 aaKnown RBP6.01□□□□□ -1.45
NEK3-211ENST00000629912 ZNF185O15231 689 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 BUB1O43683 1085 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 HBP1O60381 514 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 RTN2O75298 545 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 ERLIN1O75477 346 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 ARIH2O95376 493 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 TFRCP02786 760 aaKnown RBP6.01□□□□□ -1.45
NEK3-211ENST00000629912 ZBTB48P10074 688 aaPredicted RBP6.01□□□□□ -1.45
NEK3-211ENST00000629912 TXNP10599 105 aaKnown RBP6.01□□□□□ -1.45
NEK3-211ENST00000629912 CHRNB2P17787 502 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 LIG4P49917 911 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 AP3M2P53677 418 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 NAP1L1P55209 391 aaKnown RBP6.01□□□□□ -1.45
NEK3-211ENST00000629912 POU5F1Q01860 360 aaKnown RBP6.01□□□□□ -1.45
NEK3-211ENST00000629912 GCNT1Q02742 428 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 MAP2K1Q02750 393 aaPredicted RBP6.01□□□□□ -1.45
NEK3-211ENST00000629912 GRM1Q13255 1194 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 MKRN4PQ13434 485 aaPredicted RBP6.01□□□□□ -1.45
NEK3-211ENST00000629912 PLCB4Q15147 1175 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 RPS6KA1Q15418 735 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 SURF1Q15526 300 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 ARHGAP44Q17R89 818 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 ZACNQ401N2 412 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 CFAP221Q4G0U5 840 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 GLE1Q53GS7 698 aaKnown RBP6.01□□□□□ -1.45
NEK3-211ENST00000629912 EAPPQ56P03 285 aaPredicted RBP6.01□□□□□ -1.45
NEK3-211ENST00000629912 ZNF484Q5JVG2 852 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 BEND6Q5SZJ8 279 aaPredicted RBP6.01□□□□□ -1.45
NEK3-211ENST00000629912 CDCA2Q69YH5 1023 aaPredicted RBP6.01□□□□□ -1.45
NEK3-211ENST00000629912 CCDC70Q6NSX1 233 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 TAPT1Q6NXT6 567 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 MAMDC4Q6UXC1 1216 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 CCNI2Q6ZMN8 369 aaPredicted RBP6.01□□□□□ -1.45
NEK3-211ENST00000629912 GLYCTKQ8IVS8 523 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 SPATA4Q8NEY3 305 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 HELQQ8TDG4 1101 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 COG1Q8WTW3 980 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 SCFD2Q8WU76 684 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 PRPF31Q8WWY3 499 aaKnown RBP6.01□□□□□ -1.45
NEK3-211ENST00000629912 EMID1Q96A84 441 aaPredicted RBP6.01□□□□□ -1.45
NEK3-211ENST00000629912 CCDC127Q96BQ5 260 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 SAAL1Q96ER3 474 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 KREMEN1Q96MU8 473 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 NT5C1BQ96P26 610 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 PNKPQ96T60 521 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 POP1Q99575 1024 aaKnown RBP6.01□□□□□ -1.45
NEK3-211ENST00000629912 FAM213AQ9BRX8 229 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 FUT8Q9BYC5 575 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 CCDC113Q9H0I3 377 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 C2orf40Q9H1Z8 148 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 VTA1Q9NP79 307 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 SUCLA2Q9P2R7 463 aaPredicted RBP6.01□□□□□ -1.45
NEK3-211ENST00000629912 L1RE1Q9UN81 338 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 CLEC11AQ9Y240 323 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 EVPLQ92817 2033 aa6.01□□□□□ -1.45
NEK3-211ENST00000629912 LRRIQ4A6NIV6 560 aa6□□□□□ -1.45
NEK3-211ENST00000629912 BTBD19C9JJ37 291 aa6□□□□□ -1.45
NEK3-211ENST00000629912 NOP56O00567 594 aaKnown RBP6□□□□□ -1.45
NEK3-211ENST00000629912 MAGEB2O15479 319 aa6□□□□□ -1.45
NEK3-211ENST00000629912 NCK2O43639 380 aa6□□□□□ -1.45
NEK3-211ENST00000629912 SORBS3O60504 671 aa6□□□□□ -1.45
NEK3-211ENST00000629912 MSCO60682 206 aa6□□□□□ -1.45
NEK3-211ENST00000629912 LRRN2O75325 713 aa6□□□□□ -1.45
NEK3-211ENST00000629912 PPFIA4O75335 1185 aa6□□□□□ -1.45
NEK3-211ENST00000629912 TOM1L1O75674 476 aa6□□□□□ -1.45
NEK3-211ENST00000629912 MTA2O94776 668 aa6□□□□□ -1.45
NEK3-211ENST00000629912 KIF4AO95239 1232 aa6□□□□□ -1.45
NEK3-211ENST00000629912 SGPL1O95470 568 aa6□□□□□ -1.45
NEK3-211ENST00000629912 TBC1D8O95759 1140 aa6□□□□□ -1.45
NEK3-211ENST00000629912 GH1P01241 217 aa6□□□□□ -1.45
NEK3-211ENST00000629912 FTLP02792 175 aaPredicted RBP6□□□□□ -1.45
NEK3-211ENST00000629912 RHOXF2BP0C7M4 288 aa6□□□□□ -1.45
NEK3-211ENST00000629912 PNMA6AP0CW24 399 aaPredicted RBP6□□□□□ -1.45
NEK3-211ENST00000629912 NOP2P46087 812 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms