RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 TRAPPC3O43617 180 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 KCNV1Q6PIU1 500 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 ANKS3Q6ZW76 656 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 ZC3H18Q86VM9 953 aaKnown RBP12.45□□□□□ -0.42
SHPRH-211ENST00000629427 AGR3Q8TD06 166 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 TSSK1BQ9BXA7 367 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 MLXIPLQ9NP71 852 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 MRPL40Q9NQ50 206 aaKnown RBP12.45□□□□□ -0.42
SHPRH-211ENST00000629427 CCDC151A5D8V7 595 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 LMNAP02545 664 aaKnown RBP12.44□□□□□ -0.42
SHPRH-211ENST00000629427 GUCY2CP25092 1073 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 HMGCS2P54868 508 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 SPDYAQ5MJ70 313 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 PATL1Q86TB9 770 aaKnown RBP12.44□□□□□ -0.42
SHPRH-211ENST00000629427 WDR48Q8TAF3 677 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 TNIP3Q96KP6 325 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 ZNF560Q96MR9 790 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 DCP1AQ9NPI6 582 aaPredicted RBP12.44□□□□□ -0.42
SHPRH-211ENST00000629427 KIF28PB7ZC32 967 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 TLR2O60603 784 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 ARL4DP49703 201 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 SULT1E1P49888 294 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 ZNF157P51786 506 aaPredicted RBP12.44□□□□□ -0.42
SHPRH-211ENST00000629427 POLE2P56282 527 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 TRIM72Q6ZMU5 477 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 FAM47EQ6ZV65 393 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 BTBD6Q96KE9 485 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 DACH2Q96NX9 599 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 ZFP69BQ9UJL9 534 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 DCTN4Q9UJW0 460 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 EMSYQ7Z589 1322 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 A0A087WUV0 522 aaPredicted RBP12.44□□□□□ -0.42
SHPRH-211ENST00000629427 HSD17B4P51659 736 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 TPI1P60174 286 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 QRICH1Q2TAL8 776 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 EML4Q9HC35 981 aaKnown RBP12.44□□□□□ -0.42
SHPRH-211ENST00000629427 WARS2Q9UGM6 360 aaKnown RBP12.44□□□□□ -0.42
SHPRH-211ENST00000629427 MAP3K4Q9Y6R4 1608 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 CDK12Q9NYV4 1490 aaPredicted RBP12.44□□□□□ -0.42
SHPRH-211ENST00000629427 LGALS16A8MUM7 142 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 ARIH2O95376 493 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 HMBSP08397 361 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 CCDC85BQ15834 202 aaPredicted RBP12.44□□□□□ -0.42
SHPRH-211ENST00000629427 BEND6Q5SZJ8 279 aaPredicted RBP12.44□□□□□ -0.42
SHPRH-211ENST00000629427 PID1Q7Z2X4 250 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 WNT8AQ9H1J5 351 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 ABCB6Q9NP58 842 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 CROCC2H7BZ55 1655 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 ASAP2O43150 1006 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 GRM4Q14833 912 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 FAM117BQ6P1L5 589 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 TTC39CQ8N584 583 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 SELENONQ9NZV5 590 aa12.44□□□□□ -0.42
SHPRH-211ENST00000629427 CHRNA5P30532 468 aa12.43□□□□□ -0.42
SHPRH-211ENST00000629427 TMEM62Q0P6H9 643 aa12.43□□□□□ -0.42
SHPRH-211ENST00000629427 C1orf146Q5VVC0 180 aa12.43□□□□□ -0.42
SHPRH-211ENST00000629427 ST13P4Q8IZP2 240 aaPredicted RBP12.43□□□□□ -0.42
SHPRH-211ENST00000629427 OXER1Q8TDS5 423 aa12.43□□□□□ -0.42
SHPRH-211ENST00000629427 INTS2Q9H0H0 1204 aaKnown RBP12.43□□□□□ -0.42
SHPRH-211ENST00000629427 HERC5Q9UII4 1024 aaKnown RBP12.43□□□□□ -0.42
SHPRH-211ENST00000629427 CTSHP09668 335 aa12.43□□□□□ -0.42
SHPRH-211ENST00000629427 MYBL1P10243 752 aa12.43□□□□□ -0.42
SHPRH-211ENST00000629427 DDX5P17844 614 aaKnown RBP12.43□□□□□ -0.42
SHPRH-211ENST00000629427 CHRNA3P32297 505 aa12.43□□□□□ -0.42
SHPRH-211ENST00000629427 PDIA2Q13087 525 aaKnown RBP12.43□□□□□ -0.42
SHPRH-211ENST00000629427 HIBCHQ6NVY1 386 aaPredicted RBP12.43□□□□□ -0.42
SHPRH-211ENST00000629427 MUC3BQ9H195 1237 aa12.43□□□□□ -0.42
SHPRH-211ENST00000629427 TMEM60Q9H2L4 133 aa12.43□□□□□ -0.42
SHPRH-211ENST00000629427 SPHKAPQ2M3C7 1700 aa12.43□□□□□ -0.42
SHPRH-211ENST00000629427 PLEKHG2Q9H7P9 1386 aa12.43□□□□□ -0.42
SHPRH-211ENST00000629427 EFCAB14O75071 495 aa12.43□□□□□ -0.42
SHPRH-211ENST00000629427 SYTL3Q4VX76 610 aa12.43□□□□□ -0.42
SHPRH-211ENST00000629427 RUBCNLQ9H714 662 aa12.43□□□□□ -0.42
SHPRH-211ENST00000629427 ACTR5Q9H9F9 607 aaPredicted RBP12.43□□□□□ -0.42
SHPRH-211ENST00000629427 STK36Q9NRP7 1315 aa12.43□□□□□ -0.42
SHPRH-211ENST00000629427 SAMD9LQ8IVG5 1584 aa12.43□□□□□ -0.42
SHPRH-211ENST00000629427 ZNF197O14709 1029 aa12.43□□□□□ -0.42
SHPRH-211ENST00000629427 TAP1Q03518 808 aa12.43□□□□□ -0.42
SHPRH-211ENST00000629427 CUL4AQ13619 759 aa12.43□□□□□ -0.42
SHPRH-211ENST00000629427 ZNF579Q8NAF0 562 aaKnown RBP12.43□□□□□ -0.42
SHPRH-211ENST00000629427 AGAP3Q96P47 875 aa12.43□□□□□ -0.42
SHPRH-211ENST00000629427 KATNAL1Q9BW62 490 aa12.43□□□□□ -0.42
SHPRH-211ENST00000629427 PCDHA10Q9Y5I2 948 aa12.43□□□□□ -0.42
SHPRH-211ENST00000629427 SNX5Q9Y5X3 404 aa12.43□□□□□ -0.42
SHPRH-211ENST00000629427 KCNN4O15554 427 aa12.43□□□□□ -0.42
SHPRH-211ENST00000629427 PMS2P54278 862 aa12.43□□□□□ -0.42
SHPRH-211ENST00000629427 ADCK2Q7Z695 626 aa12.43□□□□□ -0.42
SHPRH-211ENST00000629427 GAS2L3Q86XJ1 694 aa12.43□□□□□ -0.42
SHPRH-211ENST00000629427 NUDCD3Q8IVD9 361 aa12.43□□□□□ -0.42
SHPRH-211ENST00000629427 OTUB1Q96FW1 271 aaPredicted RBP12.43□□□□□ -0.42
SHPRH-211ENST00000629427 ADRA2BP18089 450 aa12.43□□□□□ -0.42
SHPRH-211ENST00000629427 LSM7Q9UK45 103 aaKnown RBP12.43□□□□□ -0.42
SHPRH-211ENST00000629427 A0A0G2JLW4 131 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 STAT5BP51692 787 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 MEI1Q5TIA1 1274 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 BRINP3Q76B58 766 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 RHOT1Q8IXI2 618 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 APPL2Q8NEU8 664 aa12.42□□□□□ -0.42
SHPRH-211ENST00000629427 PPHLN1Q8NEY8 458 aaKnown RBP12.42□□□□□ -0.42
SHPRH-211ENST00000629427 CNOT7Q9UIV1 285 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms