RNA–Protein interactions for RNA: ENST00000629151.2

PTPN7-219, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5 BASIC

Gene PTPN7, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-219ENST00000629151 CAPN15O75808 1086 aa12.6□□□□□ -0.39
PTPN7-219ENST00000629151 PRKCSHP14314 528 aaPredicted RBP12.6□□□□□ -0.39
PTPN7-219ENST00000629151 GRM5P41594 1212 aa12.6□□□□□ -0.39
PTPN7-219ENST00000629151 MAGEA10P43363 369 aaPredicted RBP12.6□□□□□ -0.39
PTPN7-219ENST00000629151 YARSP54577 528 aaKnown RBP12.6□□□□□ -0.39
PTPN7-219ENST00000629151 TYRO3Q06418 890 aa12.6□□□□□ -0.39
PTPN7-219ENST00000629151 TMEM240Q5SV17 173 aa12.6□□□□□ -0.39
PTPN7-219ENST00000629151 UBXN11Q5T124 520 aa12.6□□□□□ -0.39
PTPN7-219ENST00000629151 C16orf59Q7L2K0 433 aa12.6□□□□□ -0.39
PTPN7-219ENST00000629151 USP37Q86T82 979 aa12.6□□□□□ -0.39
PTPN7-219ENST00000629151 RTN4RL1Q86UN2 441 aaPredicted RBP12.6□□□□□ -0.39
PTPN7-219ENST00000629151 ECHDC2Q86YB7 292 aa12.6□□□□□ -0.39
PTPN7-219ENST00000629151 NPAS4Q8IUM7 802 aa12.6□□□□□ -0.39
PTPN7-219ENST00000629151 CD302Q8IX05 232 aa12.6□□□□□ -0.39
PTPN7-219ENST00000629151 SMYD4Q8IYR2 804 aaPredicted RBP12.6□□□□□ -0.39
PTPN7-219ENST00000629151 XXYLT1Q8NBI6 393 aa12.6□□□□□ -0.39
PTPN7-219ENST00000629151 NOC3LQ8WTT2 800 aaKnown RBP12.6□□□□□ -0.39
PTPN7-219ENST00000629151 NELFBQ8WX92 580 aa12.6□□□□□ -0.39
PTPN7-219ENST00000629151 ACAP3Q96P50 834 aa12.6□□□□□ -0.39
PTPN7-219ENST00000629151 GDF15Q99988 308 aa12.6□□□□□ -0.39
PTPN7-219ENST00000629151 OSBPL7Q9BZF2 842 aa12.6□□□□□ -0.39
PTPN7-219ENST00000629151 CDT1Q9H211 546 aa12.6□□□□□ -0.39
PTPN7-219ENST00000629151 PLEKHA5Q9HAU0 1116 aa12.6□□□□□ -0.39
PTPN7-219ENST00000629151 ANKFY1Q9P2R3 1169 aa12.6□□□□□ -0.39
PTPN7-219ENST00000629151 AGO2Q9UKV8 859 aaKnown RBP12.6□□□□□ -0.39
PTPN7-219ENST00000629151 LRFN2Q9ULH4 789 aa12.6□□□□□ -0.39
PTPN7-219ENST00000629151 FRMD4BQ9Y2L6 1034 aa12.6□□□□□ -0.39
PTPN7-219ENST00000629151 PCDHB7Q9Y5E2 793 aa12.6□□□□□ -0.39
PTPN7-219ENST00000629151 SYCE3A1L190 88 aa12.59□□□□□ -0.39
PTPN7-219ENST00000629151 CARNS1A5YM72 827 aa12.59□□□□□ -0.39
PTPN7-219ENST00000629151 ZNF233A6NK53 670 aa12.59□□□□□ -0.39
PTPN7-219ENST00000629151 ANKRD63C9JTQ0 380 aa12.59□□□□□ -0.39
PTPN7-219ENST00000629151 H0YGN5 161 aa12.59□□□□□ -0.39
PTPN7-219ENST00000629151 ABLIM1O14639 778 aa12.59□□□□□ -0.39
PTPN7-219ENST00000629151 NPTXRO95502 500 aa12.59□□□□□ -0.39
PTPN7-219ENST00000629151 GNA14O95837 355 aa12.59□□□□□ -0.39
PTPN7-219ENST00000629151 NR3C1P04150 777 aa12.59□□□□□ -0.39
PTPN7-219ENST00000629151 ACRP10323 421 aa12.59□□□□□ -0.39
PTPN7-219ENST00000629151 ITGA4P13612 1032 aa12.59□□□□□ -0.39
PTPN7-219ENST00000629151 ADSSP30520 456 aa12.59□□□□□ -0.39
PTPN7-219ENST00000629151 ENPEPQ07075 957 aa12.59□□□□□ -0.39
PTPN7-219ENST00000629151 ADAM9Q13443 819 aa12.59□□□□□ -0.39
PTPN7-219ENST00000629151 SURF1Q15526 300 aa12.59□□□□□ -0.39
PTPN7-219ENST00000629151 DPCR1Q3MIW9 517 aa12.59□□□□□ -0.39
PTPN7-219ENST00000629151 ZCWPW2Q504Y3 356 aa12.59□□□□□ -0.39
PTPN7-219ENST00000629151 EEF1DP3Q658K8 133 aa12.59□□□□□ -0.39
PTPN7-219ENST00000629151 KLHL10Q6JEL2 608 aa12.59□□□□□ -0.39
PTPN7-219ENST00000629151 SLC39A4Q6P5W5 647 aa12.59□□□□□ -0.39
PTPN7-219ENST00000629151 GPD1LQ8N335 351 aa12.59□□□□□ -0.39
PTPN7-219ENST00000629151 VWCEQ96DN2 955 aa12.59□□□□□ -0.39
PTPN7-219ENST00000629151 FBXL18Q96ME1 805 aa12.59□□□□□ -0.39
PTPN7-219ENST00000629151 CEP63Q96MT8 703 aa12.59□□□□□ -0.39
PTPN7-219ENST00000629151 SLC9A7Q96T83 725 aa12.59□□□□□ -0.39
PTPN7-219ENST00000629151 MKNK1Q9BUB5 465 aa12.59□□□□□ -0.39
PTPN7-219ENST00000629151 UBE2OQ9C0C9 1292 aaKnown RBP12.59□□□□□ -0.39
PTPN7-219ENST00000629151 SEMA6BQ9H3T3 888 aa12.59□□□□□ -0.39
PTPN7-219ENST00000629151 DMAC2Q9NW81 257 aa12.59□□□□□ -0.39
PTPN7-219ENST00000629151 KANSL3Q9P2N6 904 aa12.59□□□□□ -0.39
PTPN7-219ENST00000629151 GIT1Q9Y2X7 761 aa12.59□□□□□ -0.39
PTPN7-219ENST00000629151 SLC4A7Q9Y6M7 1214 aa12.59□□□□□ -0.39
PTPN7-219ENST00000629151 CENPFP49454 3210 aa12.58□□□□□ -0.39
PTPN7-219ENST00000629151 TTLL13PA6NNM8 815 aa12.58□□□□□ -0.4
PTPN7-219ENST00000629151 MGEA5O60502 916 aa12.58□□□□□ -0.4
PTPN7-219ENST00000629151 EXOC3O60645 756 aa12.58□□□□□ -0.4
PTPN7-219ENST00000629151 IL18RAPO95256 599 aa12.58□□□□□ -0.4
PTPN7-219ENST00000629151 CD44P16070 742 aaKnown RBP12.58□□□□□ -0.4
PTPN7-219ENST00000629151 NR2F2P24468 414 aa12.58□□□□□ -0.4
PTPN7-219ENST00000629151 PSMC2P35998 433 aaKnown RBP12.58□□□□□ -0.4
PTPN7-219ENST00000629151 ANKRD40Q6AI12 368 aa12.58□□□□□ -0.4
PTPN7-219ENST00000629151 TTI2Q6NXR4 508 aa12.58□□□□□ -0.4
PTPN7-219ENST00000629151 GLB1LQ6UWU2 654 aa12.58□□□□□ -0.4
PTPN7-219ENST00000629151 OTOP2Q7RTS6 562 aa12.58□□□□□ -0.4
PTPN7-219ENST00000629151 ZBTB33Q86T24 672 aa12.58□□□□□ -0.4
PTPN7-219ENST00000629151 ENOX1Q8TC92 643 aaKnown RBP12.58□□□□□ -0.4
PTPN7-219ENST00000629151 TOP1MTQ969P6 601 aa12.58□□□□□ -0.4
PTPN7-219ENST00000629151 ZBTB45Q96K62 511 aaPredicted RBP12.58□□□□□ -0.4
PTPN7-219ENST00000629151 BPIFA3Q9BQP9 254 aa12.58□□□□□ -0.4
PTPN7-219ENST00000629151 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.58□□□□□ -0.4
PTPN7-219ENST00000629151 ASB7Q9H672 318 aa12.58□□□□□ -0.4
PTPN7-219ENST00000629151 RPF1Q9H9Y2 349 aaKnown RBP12.58□□□□□ -0.4
PTPN7-219ENST00000629151 METTL14Q9HCE5 456 aaKnown RBP12.58□□□□□ -0.4
PTPN7-219ENST00000629151 HSPBP1Q9NZL4 362 aa12.58□□□□□ -0.4
PTPN7-219ENST00000629151 CPSF3Q9UKF6 684 aaKnown RBP12.58□□□□□ -0.4
PTPN7-219ENST00000629151 IPPQ9Y573 584 aa12.58□□□□□ -0.4
PTPN7-219ENST00000629151 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.57□□□□□ -0.4
PTPN7-219ENST00000629151 ZBBXA8MT70 800 aa12.57□□□□□ -0.4
PTPN7-219ENST00000629151 SMTNL1A8MU46 457 aa12.57□□□□□ -0.4
PTPN7-219ENST00000629151 INPPL1O15357 1258 aa12.57□□□□□ -0.4
PTPN7-219ENST00000629151 SLC16A3O15427 465 aaKnown RBP12.57□□□□□ -0.4
PTPN7-219ENST00000629151 EDN1P05305 212 aa12.57□□□□□ -0.4
PTPN7-219ENST00000629151 EPHB4P54760 987 aa12.57□□□□□ -0.4
PTPN7-219ENST00000629151 ZNF445P59923 1031 aa12.57□□□□□ -0.4
PTPN7-219ENST00000629151 WDR5P61964 334 aaKnown RBP12.57□□□□□ -0.4
PTPN7-219ENST00000629151 TPD52L1Q16890 204 aaPredicted RBP12.57□□□□□ -0.4
PTPN7-219ENST00000629151 RASIP1Q5U651 963 aa12.57□□□□□ -0.4
PTPN7-219ENST00000629151 SPATA1Q5VX52 437 aa12.57□□□□□ -0.4
PTPN7-219ENST00000629151 LRSAM1Q6UWE0 723 aa12.57□□□□□ -0.4
PTPN7-219ENST00000629151 FILIP1Q7Z7B0 1213 aa12.57□□□□□ -0.4
PTPN7-219ENST00000629151 ZNF598Q86UK7 904 aaKnown RBP12.57□□□□□ -0.4
PTPN7-219ENST00000629151 NT5DC4Q86YG4 428 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms