RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 DDX20Q9UHI6 824 aaKnown RBP2.26□□□□□ -2.05
SPTAN1-216ENST00000629047 PUF60Q9UHX1 559 aaKnown RBP2.26□□□□□ -2.05
SPTAN1-216ENST00000629047 NRBP1Q9UHY1 535 aa2.26□□□□□ -2.05
SPTAN1-216ENST00000629047 RAB21Q9UL25 225 aa2.26□□□□□ -2.05
SPTAN1-216ENST00000629047 TPCN1Q9ULQ1 816 aa2.26□□□□□ -2.05
SPTAN1-216ENST00000629047 NOB1Q9ULX3 412 aaKnown RBP2.26□□□□□ -2.05
SPTAN1-216ENST00000629047 L1RE1Q9UN81 338 aa2.26□□□□□ -2.05
SPTAN1-216ENST00000629047 PPP2R2CQ9Y2T4 447 aa2.26□□□□□ -2.05
SPTAN1-216ENST00000629047 C15orf41Q9Y2V0 281 aa2.26□□□□□ -2.05
SPTAN1-216ENST00000629047 ZDHHC9Q9Y397 364 aa2.26□□□□□ -2.05
SPTAN1-216ENST00000629047 TMED5Q9Y3A6 229 aa2.26□□□□□ -2.05
SPTAN1-216ENST00000629047 ATP6V0A2Q9Y487 856 aa2.26□□□□□ -2.05
SPTAN1-216ENST00000629047 USP16Q9Y5T5 823 aa2.26□□□□□ -2.05
SPTAN1-216ENST00000629047 SMARCA4P51532 1647 aa2.26□□□□□ -2.05
SPTAN1-216ENST00000629047 TCOF1Q13428 1488 aaKnown RBP2.26□□□□□ -2.05
SPTAN1-216ENST00000629047 PLB1Q6P1J6 1458 aa2.26□□□□□ -2.05
SPTAN1-216ENST00000629047 MBD5Q9P267 1494 aa2.26□□□□□ -2.05
SPTAN1-216ENST00000629047 FAM135BQ49AJ0 1406 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 PPIP5K1Q6PFW1 1433 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 POLR3AO14802 1390 aaPredicted RBP2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 KIF24Q5T7B8 1368 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 E9PCH4 1651 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 EIF2AK4Q9P2K8 1649 aaKnown RBP2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 UBN2Q6ZU65 1347 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 CCDC162PA2VCL2 907 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 USP27XA6NNY8 438 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 PATE3B3GLJ2 98 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 GCOM1H8Y6P7 765 aaPredicted RBP2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 MYO1FO00160 1098 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 HIP1O00291 1037 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 DDX3XO00571 662 aaKnown RBP eCLIP2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 IKBKBO14920 756 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 ZSCAN9O15535 394 aaPredicted RBP2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 CYTH3O43739 400 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 SMARCA5O60264 1052 aaPredicted RBP2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 MGEA5O60502 916 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 TBCAO75347 108 aaKnown RBP2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 ATP6V1G1O75348 118 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 RNF8O76064 485 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 ANP32DO95626 131 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 ATP6V1G2O95670 118 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 FAM107AO95990 144 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 SLC3A2P08195 630 aaKnown RBP2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 CLTAP09496 248 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 MYZAPP0CAP1 466 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 FAM200BP0CF97 657 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 EPB41P11171 864 aaKnown RBP2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 TRIM27P14373 513 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 IDO1P14902 403 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 ZNF24P17028 368 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 SDSP20132 328 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 NR1D1P20393 614 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 S100A1P23297 94 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 RPL13P26373 211 aaKnown RBP2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 GJB2P29033 226 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 CA8P35219 290 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 MLH1P40692 756 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 PAFAH1B1P43034 410 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 ME1P48163 572 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 FNTAP49354 379 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 SERPINB8P50452 374 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 RASSF2P50749 326 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 HNRNPMP52272 730 aaKnown RBP eCLIP2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 ZNF131P52739 623 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 EPHB4P54760 987 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 GNAI1P63096 354 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 TUBA1BP68363 451 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 FAM160A1Q05DH4 1040 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 ADCY1Q08828 1119 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 IKQ13123 557 aaPredicted RBP2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 PAK2Q13177 524 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 CBX3Q13185 183 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 MPP3Q13368 585 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 RIPK1Q13546 671 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 TUBA3CQ13748 450 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 BLMHQ13867 455 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 TRIM14Q14142 442 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 RCN1Q15293 331 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 CCDC6Q16204 474 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 CCDC153Q494R4 210 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 LONRF3Q496Y0 759 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 GLE1Q53GS7 698 aaKnown RBP2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 CFAP157Q5JU67 520 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 ZNF569Q5MCW4 686 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 NBPF12Q5TAG4 269 aaPredicted RBP2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 SOGA3Q5TF21 947 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 E4F1Q66K89 784 aaPredicted RBP2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 CDCA2Q69YH5 1023 aaPredicted RBP2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 TRIM68Q6AZZ1 485 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 THOC7Q6I9Y2 204 aaKnown RBP2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 PPP4R3AQ6IN85 833 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 KLC3Q6P597 504 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 EMBQ6PCB8 327 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 KCNV1Q6PIU1 500 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 PCSK4Q6UW60 755 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 RNF207Q6ZRF8 634 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 TUBA1AQ71U36 451 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 MAATS1Q7Z4T9 603 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 NANOGNBQ7Z5D8 188 aa2.25□□□□□ -2.05
SPTAN1-216ENST00000629047 UBE2Q1Q7Z7E8 422 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms