RNA–Protein interactions for RNA: ENST00000628729.2

PDCD6-214, Transcript of programmed cell death 6, humanhuman

TSL 5 BASIC

Gene PDCD6, Length 1,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-214ENST00000628729 USP20Q9Y2K6 914 aa18.37■□□□□ 0.53
PDCD6-214ENST00000628729 MYO10Q9HD67 2058 aa18.37■□□□□ 0.53
PDCD6-214ENST00000628729 A0A1B0GUA9 196 aa18.36■□□□□ 0.53
PDCD6-214ENST00000628729 URODP06132 367 aa18.36■□□□□ 0.53
PDCD6-214ENST00000628729 XRCC6P12956 609 aaKnown RBP eCLIP18.36■□□□□ 0.531e-5■■■□□ 14.9
PDCD6-214ENST00000628729 C8orf34Q49A92 452 aa18.36■□□□□ 0.53
PDCD6-214ENST00000628729 KIAA0319Q5VV43 1072 aa18.36■□□□□ 0.53
PDCD6-214ENST00000628729 SLC27A1Q6PCB7 646 aa18.36■□□□□ 0.53
PDCD6-214ENST00000628729 C4orf32Q8N8J7 132 aa18.36■□□□□ 0.53
PDCD6-214ENST00000628729 FBXO18Q8NFZ0 1043 aa18.36■□□□□ 0.53
PDCD6-214ENST00000628729 RPS6KC1Q96S38 1066 aa18.36■□□□□ 0.53
PDCD6-214ENST00000628729 PAAF1Q9BRP4 392 aa18.36■□□□□ 0.53
PDCD6-214ENST00000628729 LLPHQ9BRT6 129 aaKnown RBP18.36■□□□□ 0.53
PDCD6-214ENST00000628729 POLR3CQ9BUI4 534 aaPredicted RBP18.36■□□□□ 0.53
PDCD6-214ENST00000628729 FOXP1Q9H334 677 aaPredicted RBP18.36■□□□□ 0.53
PDCD6-214ENST00000628729 MRPL17Q9NRX2 175 aaKnown RBP18.36■□□□□ 0.53
PDCD6-214ENST00000628729 KLK14Q9P0G3 267 aa18.36■□□□□ 0.53
PDCD6-214ENST00000628729 GIT1Q9Y2X7 761 aa18.36■□□□□ 0.53
PDCD6-214ENST00000628729 TEX28O15482 410 aa18.35■□□□□ 0.53
PDCD6-214ENST00000628729 KLRC2P26717 231 aa18.35■□□□□ 0.53
PDCD6-214ENST00000628729 RPA1P27694 616 aa18.35■□□□□ 0.53
PDCD6-214ENST00000628729 TCF15Q12870 199 aa18.35■□□□□ 0.53
PDCD6-214ENST00000628729 SAFBQ15424 915 aaKnown RBP eCLIP18.35■□□□□ 0.53
PDCD6-214ENST00000628729 TTC38Q5R3I4 469 aa18.35■□□□□ 0.53
PDCD6-214ENST00000628729 GPR149Q86SP6 731 aa18.35■□□□□ 0.53
PDCD6-214ENST00000628729 PPFIBP1Q86W92 1011 aa18.35■□□□□ 0.53
PDCD6-214ENST00000628729 TDRD5Q8NAT2 981 aaKnown RBP18.35■□□□□ 0.53
PDCD6-214ENST00000628729 TMEM87AQ8NBN3 555 aa18.35■□□□□ 0.53
PDCD6-214ENST00000628729 MCPH1Q8NEM0 835 aa18.35■□□□□ 0.53
PDCD6-214ENST00000628729 EMILIN2Q9BXX0 1053 aa18.35■□□□□ 0.53
PDCD6-214ENST00000628729 GPR62Q9BZJ7 368 aa18.35■□□□□ 0.53
PDCD6-214ENST00000628729 TRIM6Q9C030 488 aaPredicted RBP18.35■□□□□ 0.53
PDCD6-214ENST00000628729 CCDC113Q9H0I3 377 aa18.35■□□□□ 0.53
PDCD6-214ENST00000628729 FZD8Q9H461 694 aa18.35■□□□□ 0.53
PDCD6-214ENST00000628729 PDZD7Q9H5P4 517 aa18.35■□□□□ 0.53
PDCD6-214ENST00000628729 MAN1C1Q9NR34 630 aa18.35■□□□□ 0.53
PDCD6-214ENST00000628729 SORCS3Q9UPU3 1222 aa18.35■□□□□ 0.53
PDCD6-214ENST00000628729 ZMYM2Q9UBW7 1377 aa18.34■□□□□ 0.53
PDCD6-214ENST00000628729 VWA8A3KMH1 1905 aa18.34■□□□□ 0.53
PDCD6-214ENST00000628729 PTGESO14684 152 aa18.34■□□□□ 0.53
PDCD6-214ENST00000628729 N4BP1O75113 896 aaKnown RBP18.34■□□□□ 0.53
PDCD6-214ENST00000628729 MYBP10242 640 aa18.34■□□□□ 0.53
PDCD6-214ENST00000628729 GLUD2P49448 558 aa18.34■□□□□ 0.53
PDCD6-214ENST00000628729 MRE11P49959 708 aa18.34■□□□□ 0.53
PDCD6-214ENST00000628729 DSG1Q02413 1049 aa18.34■□□□□ 0.53
PDCD6-214ENST00000628729 FAM187BQ17R55 369 aa18.34■□□□□ 0.53
PDCD6-214ENST00000628729 ATAT1Q5SQI0 421 aa18.34■□□□□ 0.53
PDCD6-214ENST00000628729 ZBTB33Q86T24 672 aa18.34■□□□□ 0.53
PDCD6-214ENST00000628729 NOSTRINQ8IVI9 506 aa18.34■□□□□ 0.53
PDCD6-214ENST00000628729 SUGP1Q8IWZ8 645 aaKnown RBP18.34■□□□□ 0.53
PDCD6-214ENST00000628729 ZDHHC14Q8IZN3 488 aa18.34■□□□□ 0.53
PDCD6-214ENST00000628729 KIFC3Q9BVG8 833 aa18.34■□□□□ 0.53
PDCD6-214ENST00000628729 POLD4Q9HCU8 107 aa18.34■□□□□ 0.53
PDCD6-214ENST00000628729 CHST7Q9NS84 486 aa18.34■□□□□ 0.53
PDCD6-214ENST00000628729 STK39Q9UEW8 545 aa18.34■□□□□ 0.53
PDCD6-214ENST00000628729 VPS13AQ96RL7 3174 aa18.33■□□□□ 0.53
PDCD6-214ENST00000628729 TOB1P50616 345 aaPredicted RBP18.33■□□□□ 0.52
PDCD6-214ENST00000628729 GRIK3Q13003 919 aa18.33■□□□□ 0.52
PDCD6-214ENST00000628729 ORC2Q13416 577 aaPredicted RBP18.33■□□□□ 0.52
PDCD6-214ENST00000628729 MTMR3Q13615 1198 aa18.33■□□□□ 0.52
PDCD6-214ENST00000628729 NAB2Q15742 525 aa18.33■□□□□ 0.52
PDCD6-214ENST00000628729 EEF1DP3Q658K8 133 aa18.33■□□□□ 0.52
PDCD6-214ENST00000628729 FUT10Q6P4F1 479 aa18.33■□□□□ 0.52
PDCD6-214ENST00000628729 PADI6Q6TGC4 694 aa18.33■□□□□ 0.52
PDCD6-214ENST00000628729 PRIMPOLQ96LW4 560 aa18.33■□□□□ 0.52
PDCD6-214ENST00000628729 NACC1Q96RE7 527 aa18.33■□□□□ 0.52
PDCD6-214ENST00000628729 RXFP1Q9HBX9 757 aa18.33■□□□□ 0.52
PDCD6-214ENST00000628729 LIMD1Q9UGP4 676 aa18.33■□□□□ 0.52
PDCD6-214ENST00000628729 USTQ9Y2C2 406 aa18.33■□□□□ 0.52
PDCD6-214ENST00000628729 MTCL1Q9Y4B5 1905 aaKnown RBP18.32■□□□□ 0.52
PDCD6-214ENST00000628729 RFPL2O75678 378 aa18.32■□□□□ 0.52
PDCD6-214ENST00000628729 CYP11B2P19099 503 aa18.32■□□□□ 0.52
PDCD6-214ENST00000628729 NCBP1Q09161 790 aaKnown RBP18.32■□□□□ 0.52
PDCD6-214ENST00000628729 PRMT7Q9NVM4 692 aaPredicted RBP18.32■□□□□ 0.52
PDCD6-214ENST00000628729 PARP2Q9UGN5 583 aa18.32■□□□□ 0.52
PDCD6-214ENST00000628729 CACNA1HO95180 2353 aa18.32■□□□□ 0.52
PDCD6-214ENST00000628729 DOCK8Q8NF50 2099 aa18.32■□□□□ 0.52
PDCD6-214ENST00000628729 ARHGEF35A5YM69 484 aa18.31■□□□□ 0.52
PDCD6-214ENST00000628729 RECQL4O94761 1208 aa18.31■□□□□ 0.52
PDCD6-214ENST00000628729 PRKCBP05771 671 aa18.31■□□□□ 0.52
PDCD6-214ENST00000628729 RPL17P18621 184 aaKnown RBP18.31■□□□□ 0.52
PDCD6-214ENST00000628729 IGFBP6P24592 240 aaPredicted RBP18.31■□□□□ 0.52
PDCD6-214ENST00000628729 RBM25P49756 843 aaKnown RBP18.31■□□□□ 0.52
PDCD6-214ENST00000628729 FXR2P51116 673 aaKnown RBP eCLIP18.31■□□□□ 0.52
PDCD6-214ENST00000628729 HMGN5P82970 282 aaKnown RBP18.31■□□□□ 0.52
PDCD6-214ENST00000628729 RTP2Q5QGT7 225 aa18.31■□□□□ 0.52
PDCD6-214ENST00000628729 C15orf39Q6ZRI6 1047 aa18.31■□□□□ 0.52
PDCD6-214ENST00000628729 CCDC149Q6ZUS6 474 aa18.31■□□□□ 0.52
PDCD6-214ENST00000628729 UBALD2Q8IYN6 164 aa18.31■□□□□ 0.52
PDCD6-214ENST00000628729 HACE1Q8IYU2 909 aa18.31■□□□□ 0.52
PDCD6-214ENST00000628729 CMASQ8NFW8 434 aaPredicted RBP18.31■□□□□ 0.52
PDCD6-214ENST00000628729 HASPINQ8TF76 798 aa18.31■□□□□ 0.52
PDCD6-214ENST00000628729 ZNF707Q96C28 371 aaPredicted RBP18.31■□□□□ 0.52
PDCD6-214ENST00000628729 SNTG2Q9NY99 539 aa18.31■□□□□ 0.52
PDCD6-214ENST00000628729 ADAM28Q9UKQ2 775 aa18.31■□□□□ 0.52
PDCD6-214ENST00000628729 PCDHB6Q9Y5E3 794 aa18.31■□□□□ 0.52
PDCD6-214ENST00000628729 CASTOR2A6NHX0 329 aa18.3■□□□□ 0.52
PDCD6-214ENST00000628729 SPDYE4A6NLX3 237 aa18.3■□□□□ 0.52
PDCD6-214ENST00000628729 PP2D1A8MPX8 630 aa18.3■□□□□ 0.52
PDCD6-214ENST00000628729 EIF5BO60841 1220 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms