RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 GSTCDQ8NEC7 633 aa24.59■■□□□ 1.53
SF1-220ENST00000626028 RASSF8Q8NHQ8 419 aa24.59■■□□□ 1.53
SF1-220ENST00000626028 ZFP42Q96MM3 310 aa24.59■■□□□ 1.53
SF1-220ENST00000626028 KIFC3Q9BVG8 833 aa24.59■■□□□ 1.53
SF1-220ENST00000626028 MRPL4Q9BYD3 311 aaKnown RBP24.59■■□□□ 1.53
SF1-220ENST00000626028 GBP3Q9H0R5 595 aa24.59■■□□□ 1.53
SF1-220ENST00000626028 FOXD4L1Q9NU39 408 aa24.59■■□□□ 1.53
SF1-220ENST00000626028 PRKAG3Q9UGI9 489 aa24.59■■□□□ 1.53
SF1-220ENST00000626028 FBXO2Q9UK22 296 aaPredicted RBP24.59■■□□□ 1.53
SF1-220ENST00000626028 NT5C1B-RDH14C9J2C7 533 aa24.58■■□□□ 1.53
SF1-220ENST00000626028 TBX10O75333 385 aa24.58■■□□□ 1.53
SF1-220ENST00000626028 CSPG5O95196 566 aa24.58■■□□□ 1.53
SF1-220ENST00000626028 CTSAP10619 480 aa24.58■■□□□ 1.53
SF1-220ENST00000626028 PLCG1P19174 1290 aa24.58■■□□□ 1.53
SF1-220ENST00000626028 ABCD1P33897 745 aa24.58■■□□□ 1.53
SF1-220ENST00000626028 GTF2F1P35269 517 aaKnown RBP eCLIP24.58■■□□□ 1.53
SF1-220ENST00000626028 TXLNAP40222 546 aa24.58■■□□□ 1.53
SF1-220ENST00000626028 COASYQ13057 564 aa24.58■■□□□ 1.53
SF1-220ENST00000626028 PLPP4Q5VZY2 271 aa24.58■■□□□ 1.53
SF1-220ENST00000626028 RBM23Q86U06 439 aaKnown RBP24.58■■□□□ 1.53
SF1-220ENST00000626028 VPS52Q8N1B4 723 aa24.58■■□□□ 1.53
SF1-220ENST00000626028 MSLNLQ96KJ4 702 aa24.58■■□□□ 1.53
SF1-220ENST00000626028 RPS6KC1Q96S38 1066 aa24.58■■□□□ 1.53
SF1-220ENST00000626028 PLIN2Q99541 437 aa24.58■■□□□ 1.53
SF1-220ENST00000626028 ZBP1Q9H171 429 aa24.58■■□□□ 1.53
SF1-220ENST00000626028 POLD4Q9HCU8 107 aa24.58■■□□□ 1.53
SF1-220ENST00000626028 STK17AQ9UEE5 414 aa24.58■■□□□ 1.53
SF1-220ENST00000626028 CCDC39Q9UFE4 941 aa24.58■■□□□ 1.53
SF1-220ENST00000626028 CD207Q9UJ71 328 aa24.58■■□□□ 1.53
SF1-220ENST00000626028 PDCD11Q14690 1871 aaKnown RBP24.58■■□□□ 1.52
SF1-220ENST00000626028 C2orf71A6NGG8 1288 aa24.57■■□□□ 1.52
SF1-220ENST00000626028 TTLL13PA6NNM8 815 aa24.57■■□□□ 1.52
SF1-220ENST00000626028 NRP1O14786 923 aa24.57■■□□□ 1.52
SF1-220ENST00000626028 AKAP5P24588 427 aa24.57■■□□□ 1.52
SF1-220ENST00000626028 DDIT3P35638 169 aa24.57■■□□□ 1.52
SF1-220ENST00000626028 NASPP49321 788 aaPredicted RBP24.57■■□□□ 1.52
SF1-220ENST00000626028 GRIN1Q05586 938 aa24.57■■□□□ 1.52
SF1-220ENST00000626028 SMAD4Q13485 552 aaKnown RBP24.57■■□□□ 1.52
SF1-220ENST00000626028 KCNC3Q14003 757 aa24.57■■□□□ 1.52
SF1-220ENST00000626028 ARSHQ5FYA8 562 aa24.57■■□□□ 1.52
SF1-220ENST00000626028 NT5DC1Q5TFE4 455 aa24.57■■□□□ 1.52
SF1-220ENST00000626028 TMEM173Q86WV6 379 aaPredicted RBP24.57■■□□□ 1.52
SF1-220ENST00000626028 CDR2LQ86X02 465 aaPredicted RBP24.57■■□□□ 1.52
SF1-220ENST00000626028 RAD54LQ92698 747 aa24.57■■□□□ 1.52
SF1-220ENST00000626028 ZNF396Q96N95 335 aaPredicted RBP24.57■■□□□ 1.52
SF1-220ENST00000626028 ACO2Q99798 780 aaKnown RBP24.57■■□□□ 1.52
SF1-220ENST00000626028 APOL6Q9BWW8 343 aa24.57■■□□□ 1.52
SF1-220ENST00000626028 BLOC1S4Q9NUP1 217 aa24.57■■□□□ 1.52
SF1-220ENST00000626028 PARP2Q9UGN5 583 aa24.57■■□□□ 1.52
SF1-220ENST00000626028 PCDHGC5Q9Y5F6 944 aa24.57■■□□□ 1.52
SF1-220ENST00000626028 LINC01565O15544 149 aa24.56■■□□□ 1.52
SF1-220ENST00000626028 B4GALT3O60512 393 aa24.56■■□□□ 1.52
SF1-220ENST00000626028 GLP2RO95838 553 aa24.56■■□□□ 1.52
SF1-220ENST00000626028 LIG1P18858 919 aa24.56■■□□□ 1.52
SF1-220ENST00000626028 MARCKSP29966 332 aaPredicted RBP24.56■■□□□ 1.52
SF1-220ENST00000626028 SCNN1GP51170 649 aa24.56■■□□□ 1.52
SF1-220ENST00000626028 DLX2Q07687 328 aaPredicted RBP24.56■■□□□ 1.52
SF1-220ENST00000626028 STRN3Q13033 797 aa24.56■■□□□ 1.52
SF1-220ENST00000626028 KARSQ15046 597 aaKnown RBP24.56■■□□□ 1.52
SF1-220ENST00000626028 KRI1Q8N9T8 703 aaKnown RBP24.56■■□□□ 1.52
SF1-220ENST00000626028 LARP4BQ92615 738 aaKnown RBP24.56■■□□□ 1.52
SF1-220ENST00000626028 USP28Q96RU2 1077 aa24.56■■□□□ 1.52
SF1-220ENST00000626028 PTPRHQ9HD43 1115 aa24.56■■□□□ 1.52
SF1-220ENST00000626028 SSX2IPQ9Y2D8 614 aa24.56■■□□□ 1.52
SF1-220ENST00000626028 C5orf42Q9H799 3197 aa24.56■■□□□ 1.52
SF1-220ENST00000626028 MTCL1Q9Y4B5 1905 aaKnown RBP24.55■■□□□ 1.52
SF1-220ENST00000626028 BRD1O95696 1058 aa24.55■■□□□ 1.52
SF1-220ENST00000626028 CXCL14O95715 111 aa24.55■■□□□ 1.52
SF1-220ENST00000626028 EDN1P05305 212 aa24.55■■□□□ 1.52
SF1-220ENST00000626028 ZNF131P52739 623 aa24.55■■□□□ 1.52
SF1-220ENST00000626028 SMAD2Q15796 467 aaKnown RBP24.55■■□□□ 1.52
SF1-220ENST00000626028 FAM173BQ6P4H8 233 aa24.55■■□□□ 1.52
SF1-220ENST00000626028 GPBP1Q86WP2 473 aa24.55■■□□□ 1.52
SF1-220ENST00000626028 FAM178BQ8IXR5 827 aa24.55■■□□□ 1.52
SF1-220ENST00000626028 SMRP1Q8NCR6 262 aa24.55■■□□□ 1.52
SF1-220ENST00000626028 TMEM161BQ8NDZ6 487 aa24.55■■□□□ 1.52
SF1-220ENST00000626028 COLEC11Q9BWP8 271 aa24.55■■□□□ 1.52
SF1-220ENST00000626028 MIOSQ9NXC5 875 aa24.55■■□□□ 1.52
SF1-220ENST00000626028 CLEC1BQ9P126 229 aa24.55■■□□□ 1.52
SF1-220ENST00000626028 SFI1A8K8P3 1242 aa24.54■■□□□ 1.52
SF1-220ENST00000626028 HIDE1A8MVS5 230 aa24.54■■□□□ 1.52
SF1-220ENST00000626028 PER2O15055 1255 aa24.54■■□□□ 1.52
SF1-220ENST00000626028 SLC16A4O15374 487 aa24.54■■□□□ 1.52
SF1-220ENST00000626028 RECQL4O94761 1208 aa24.54■■□□□ 1.52
SF1-220ENST00000626028 MAPTP10636 758 aaKnown RBP24.54■■□□□ 1.52
SF1-220ENST00000626028 HOXB8P17481 243 aaPredicted RBP24.54■■□□□ 1.52
SF1-220ENST00000626028 EEF1DP3Q658K8 133 aa24.54■■□□□ 1.52
SF1-220ENST00000626028 ATL3Q6DD88 541 aa24.54■■□□□ 1.52
SF1-220ENST00000626028 ZPBP2Q6X784 338 aa24.54■■□□□ 1.52
SF1-220ENST00000626028 TAS1R3Q7RTX0 852 aa24.54■■□□□ 1.52
SF1-220ENST00000626028 GPR65Q8IYL9 337 aa24.54■■□□□ 1.52
SF1-220ENST00000626028 BCL7CQ8WUZ0 217 aaPredicted RBP24.54■■□□□ 1.52
SF1-220ENST00000626028 EPSTI1Q96J88 318 aa24.54■■□□□ 1.52
SF1-220ENST00000626028 REEP2Q9BRK0 252 aa24.54■■□□□ 1.52
SF1-220ENST00000626028 TOPORSQ9NS56 1045 aaPredicted RBP24.54■■□□□ 1.52
SF1-220ENST00000626028 MBTPS2O43462 519 aa24.53■■□□□ 1.52
SF1-220ENST00000626028 EFEMP2O95967 443 aa24.53■■□□□ 1.52
SF1-220ENST00000626028 THP07101 528 aa24.53■■□□□ 1.52
SF1-220ENST00000626028 MCF2P10911 925 aa24.53■■□□□ 1.52
SF1-220ENST00000626028 PROZP22891 400 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms