RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 DBN1Q16643 649 aa12.53□□□□□ -0.4
CHD2-205ENST00000625662 PTGISQ16647 500 aa12.53□□□□□ -0.4
CHD2-205ENST00000625662 DEFB128Q7Z7B8 93 aa12.53□□□□□ -0.4
CHD2-205ENST00000625662 KLHL7Q8IXQ5 586 aa12.53□□□□□ -0.4
CHD2-205ENST00000625662 CDK5RAP1Q96SZ6 601 aaKnown RBP12.53□□□□□ -0.4
CHD2-205ENST00000625662 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.53□□□□□ -0.4
CHD2-205ENST00000625662 ZKSCAN5Q9Y2L8 839 aa12.53□□□□□ -0.4
CHD2-205ENST00000625662 SNX9Q9Y5X1 595 aa12.53□□□□□ -0.4
CHD2-205ENST00000625662 SLC4A7Q9Y6M7 1214 aa12.53□□□□□ -0.4
CHD2-205ENST00000625662 SMIM23A6NLE4 172 aa12.52□□□□□ -0.4
CHD2-205ENST00000625662 A6NNZ2 444 aa12.52□□□□□ -0.4
CHD2-205ENST00000625662 SGK1O00141 431 aa12.52□□□□□ -0.4
CHD2-205ENST00000625662 KRT15P19012 456 aa12.52□□□□□ -0.4
CHD2-205ENST00000625662 GNA15P30679 374 aa12.52□□□□□ -0.4
CHD2-205ENST00000625662 SHMT1P34896 483 aa12.52□□□□□ -0.4
CHD2-205ENST00000625662 TMEM62Q0P6H9 643 aa12.52□□□□□ -0.4
CHD2-205ENST00000625662 TUBB8Q3ZCM7 444 aa12.52□□□□□ -0.4
CHD2-205ENST00000625662 TRPM4Q8TD43 1214 aa12.52□□□□□ -0.4
CHD2-205ENST00000625662 SYTL5Q8TDW5 730 aaPredicted RBP12.52□□□□□ -0.4
CHD2-205ENST00000625662 STK39Q9UEW8 545 aa12.52□□□□□ -0.4
CHD2-205ENST00000625662 FNDC3AQ9Y2H6 1198 aaKnown RBP12.52□□□□□ -0.4
CHD2-205ENST00000625662 SAR1BQ9Y6B6 198 aa12.52□□□□□ -0.4
CHD2-205ENST00000625662 EPN1Q9Y6I3 576 aaPredicted RBP12.52□□□□□ -0.4
CHD2-205ENST00000625662 CNTNAP5Q8WYK1 1306 aa12.52□□□□□ -0.4
CHD2-205ENST00000625662 LRRD1A4D1F6 860 aa12.52□□□□□ -0.41
CHD2-205ENST00000625662 ONECUT3O60422 494 aaPredicted RBP12.52□□□□□ -0.41
CHD2-205ENST00000625662 HSD17B4P51659 736 aa12.52□□□□□ -0.41
CHD2-205ENST00000625662 LONRF3Q496Y0 759 aa12.52□□□□□ -0.41
CHD2-205ENST00000625662 TTC31Q49AM3 519 aaPredicted RBP12.52□□□□□ -0.41
CHD2-205ENST00000625662 CES5AQ6NT32 575 aa12.52□□□□□ -0.41
CHD2-205ENST00000625662 DDX23Q9BUQ8 820 aaKnown RBP12.52□□□□□ -0.41
CHD2-205ENST00000625662 RASSF4Q9H2L5 321 aa12.52□□□□□ -0.41
CHD2-205ENST00000625662 CEP72Q9P209 647 aa12.52□□□□□ -0.41
CHD2-205ENST00000625662 MID2Q9UJV3 735 aa12.52□□□□□ -0.41
CHD2-205ENST00000625662 SLC2A3P11169 496 aa12.52□□□□□ -0.41
CHD2-205ENST00000625662 PMLP29590 882 aa12.52□□□□□ -0.41
CHD2-205ENST00000625662 FXR2P51116 673 aaKnown RBP eCLIP12.52□□□□□ -0.413e-8■■■□□ 17.4
CHD2-205ENST00000625662 PCBP1Q15365 356 aaKnown RBP eCLIP12.52□□□□□ -0.41
CHD2-205ENST00000625662 C3orf67Q6ZVT6 689 aa12.52□□□□□ -0.41
CHD2-205ENST00000625662 OXER1Q8TDS5 423 aa12.52□□□□□ -0.41
CHD2-205ENST00000625662 MAD2L2Q9UI95 211 aa12.52□□□□□ -0.41
CHD2-205ENST00000625662 DIS3Q9Y2L1 958 aaKnown RBP12.52□□□□□ -0.41
CHD2-205ENST00000625662 EMSYQ7Z589 1322 aa12.52□□□□□ -0.41
CHD2-205ENST00000625662 KDM1AO60341 852 aa12.52□□□□□ -0.41
CHD2-205ENST00000625662 KRT7P08729 469 aa12.52□□□□□ -0.41
CHD2-205ENST00000625662 WHAMMP3Q1A5X7 153 aa12.52□□□□□ -0.41
CHD2-205ENST00000625662 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.52□□□□□ -0.41
CHD2-205ENST00000625662 PRG3Q9Y2Y8 225 aaPredicted RBP12.52□□□□□ -0.41
CHD2-205ENST00000625662 MAD1L1Q9Y6D9 718 aa12.52□□□□□ -0.41
CHD2-205ENST00000625662 V9GYY5 206 aaPredicted RBP12.52□□□□□ -0.41
CHD2-205ENST00000625662 EXTL3O43909 919 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 CPP00450 1065 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 NFE2Q16621 373 aaPredicted RBP12.51□□□□□ -0.41
CHD2-205ENST00000625662 NLGN2Q8NFZ4 835 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 RGL1Q9NZL6 768 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 LTBP3Q9NS15 1303 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 MAP2P11137 1827 aaKnown RBP12.51□□□□□ -0.41
CHD2-205ENST00000625662 HARS2P49590 506 aaKnown RBP12.51□□□□□ -0.41
CHD2-205ENST00000625662 IQCB1Q15051 598 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 GRIK4Q16099 956 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 DOLKQ9UPQ8 538 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 GOLGA8QA0A0J9YX86 632 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 GOLGA8OA6NCC3 632 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 GOLGA8NF8WBI6 632 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 KCNA4P22459 653 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 PAPOLAP51003 745 aaKnown RBP12.51□□□□□ -0.41
CHD2-205ENST00000625662 RPS6KA2Q15349 733 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 DENND2CQ68D51 928 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 SAAL1Q96ER3 474 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 TSSK1BQ9BXA7 367 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 RNF14Q9UBS8 474 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 RWDD3Q9Y3V2 267 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 SLIT2O94813 1529 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 IRF6O14896 467 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 LAMB3Q13751 1172 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 GTF2H3Q13889 308 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 ZNF235Q14590 738 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 PKN2Q16513 984 aaKnown RBP12.51□□□□□ -0.41
CHD2-205ENST00000625662 WDR72Q3MJ13 1102 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 RNF187Q5TA31 235 aaPredicted RBP12.51□□□□□ -0.41
CHD2-205ENST00000625662 GPR142Q7Z601 462 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 LRRC71Q8N4P6 559 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 PIK3R5Q8WYR1 880 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 VPS39Q96JC1 886 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 SCYL1Q96KG9 808 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 NUDCD1Q96RS6 583 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 TRIM31Q9BZY9 425 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 BCL2L12Q9HB09 334 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 HSPBP1Q9NZL4 362 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 RIC1Q4ADV7 1423 aa12.51□□□□□ -0.41
CHD2-205ENST00000625662 AP3B1O00203 1094 aa12.5□□□□□ -0.41
CHD2-205ENST00000625662 KLRC1P26715 233 aa12.5□□□□□ -0.41
CHD2-205ENST00000625662 PSMC1P62191 440 aaKnown RBP12.5□□□□□ -0.41
CHD2-205ENST00000625662 PPIGQ13427 754 aaKnown RBP eCLIP12.5□□□□□ -0.413e-6■□□□□ 9.8
CHD2-205ENST00000625662 DNAJC21Q5F1R6 531 aaKnown RBP12.5□□□□□ -0.41
CHD2-205ENST00000625662 SPRYD7Q5W111 196 aa12.5□□□□□ -0.41
CHD2-205ENST00000625662 NFRKBQ6P4R8 1299 aa12.5□□□□□ -0.41
CHD2-205ENST00000625662 FAM133AQ8N9E0 248 aa12.5□□□□□ -0.41
CHD2-205ENST00000625662 MTMR14Q8NCE2 650 aa12.5□□□□□ -0.41
CHD2-205ENST00000625662 SPDYE1Q8NFV5 336 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms