RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 POTEHQ6S545 545 aa15.63■□□□□ 0.09
SNX1-214ENST00000625244 RAB11FIP4Q86YS3 637 aa15.63■□□□□ 0.09
SNX1-214ENST00000625244 KSR1Q8IVT5 923 aa15.63■□□□□ 0.09
SNX1-214ENST00000625244 ING5Q8WYH8 240 aa15.63■□□□□ 0.09
SNX1-214ENST00000625244 IER2Q9BTL4 223 aa15.63■□□□□ 0.09
SNX1-214ENST00000625244 INO80BQ9C086 356 aaPredicted RBP15.63■□□□□ 0.09
SNX1-214ENST00000625244 AGPAT5Q9NUQ2 364 aa15.63■□□□□ 0.09
SNX1-214ENST00000625244 POLIQ9UNA4 740 aa15.63■□□□□ 0.09
SNX1-214ENST00000625244 WASF3Q9UPY6 502 aa15.63■□□□□ 0.09
SNX1-214ENST00000625244 U3KPZ7 1027 aaPredicted RBP15.63■□□□□ 0.09
SNX1-214ENST00000625244 ECI2O75521 394 aa15.62■□□□□ 0.09
SNX1-214ENST00000625244 HNRNPA1P09651 372 aaKnown RBP eCLIP15.62■□□□□ 0.09
SNX1-214ENST00000625244 CNR2P34972 360 aa15.62■□□□□ 0.09
SNX1-214ENST00000625244 NAPAP54920 295 aa15.62■□□□□ 0.09
SNX1-214ENST00000625244 DSC1Q08554 894 aa15.62■□□□□ 0.09
SNX1-214ENST00000625244 USP41Q3LFD5 358 aa15.62■□□□□ 0.09
SNX1-214ENST00000625244 PRSS55Q6UWB4 352 aaPredicted RBP15.62■□□□□ 0.09
SNX1-214ENST00000625244 RHPN2Q8IUC4 686 aa15.62■□□□□ 0.09
SNX1-214ENST00000625244 MB21D2Q8IYB1 491 aaPredicted RBP15.62■□□□□ 0.09
SNX1-214ENST00000625244 C12orf50Q8NA57 414 aaPredicted RBP15.62■□□□□ 0.09
SNX1-214ENST00000625244 CEP89Q96ST8 783 aa15.62■□□□□ 0.09
SNX1-214ENST00000625244 ARRDC1-AS1Q9H2J1 176 aa15.62■□□□□ 0.09
SNX1-214ENST00000625244 HCFC1R1Q9NWW0 138 aa15.62■□□□□ 0.09
SNX1-214ENST00000625244 MIOSQ9NXC5 875 aa15.62■□□□□ 0.09
SNX1-214ENST00000625244 TCEAL9Q9UHQ7 104 aa15.62■□□□□ 0.09
SNX1-214ENST00000625244 MAN2B1O00754 1011 aa15.61■□□□□ 0.09
SNX1-214ENST00000625244 AXIN1O15169 862 aa15.61■□□□□ 0.09
SNX1-214ENST00000625244 ZIC2O95409 532 aaPredicted RBP15.61■□□□□ 0.09
SNX1-214ENST00000625244 C8AP07357 584 aa15.61■□□□□ 0.09
SNX1-214ENST00000625244 CLK2P49760 499 aaKnown RBP15.61■□□□□ 0.09
SNX1-214ENST00000625244 ADCY7P51828 1080 aa15.61■□□□□ 0.09
SNX1-214ENST00000625244 PPM1LQ5SGD2 360 aa15.61■□□□□ 0.09
SNX1-214ENST00000625244 LIN9Q5TKA1 542 aa15.61■□□□□ 0.09
SNX1-214ENST00000625244 HEATR6Q6AI08 1181 aaKnown RBP15.61■□□□□ 0.09
SNX1-214ENST00000625244 TANGO2Q6ICL3 276 aa15.61■□□□□ 0.09
SNX1-214ENST00000625244 FUT10Q6P4F1 479 aa15.61■□□□□ 0.09
SNX1-214ENST00000625244 TMTC3Q6ZXV5 915 aa15.61■□□□□ 0.09
SNX1-214ENST00000625244 ZNF410Q86VK4 478 aa15.61■□□□□ 0.09
SNX1-214ENST00000625244 LONP2Q86WA8 852 aa15.61■□□□□ 0.09
SNX1-214ENST00000625244 GPR65Q8IYL9 337 aa15.61■□□□□ 0.09
SNX1-214ENST00000625244 CRYGNQ8WXF5 182 aa15.61■□□□□ 0.09
SNX1-214ENST00000625244 DNASE1L2Q92874 299 aa15.61■□□□□ 0.09
SNX1-214ENST00000625244 SH2D3AQ9BRG2 576 aa15.61■□□□□ 0.09
SNX1-214ENST00000625244 SUCLA2Q9P2R7 463 aaPredicted RBP15.61■□□□□ 0.09
SNX1-214ENST00000625244 CELSR3Q9NYQ7 3312 aa15.61■□□□□ 0.09
SNX1-214ENST00000625244 NOTCH4Q99466 2003 aa15.6■□□□□ 0.09
SNX1-214ENST00000625244 IGKV6-21A0A0C4DH24 114 aa15.6■□□□□ 0.09
SNX1-214ENST00000625244 TMEM150BA6NC51 233 aa15.6■□□□□ 0.09
SNX1-214ENST00000625244 TMEM8BA6NDV4 472 aa15.6■□□□□ 0.09
SNX1-214ENST00000625244 ARL5CA6NH57 179 aa15.6■□□□□ 0.09
SNX1-214ENST00000625244 WDR64B1ANS9 1081 aa15.6■□□□□ 0.09
SNX1-214ENST00000625244 K7ESF4 209 aa15.6■□□□□ 0.09
SNX1-214ENST00000625244 TAF4O00268 1085 aa15.6■□□□□ 0.09
SNX1-214ENST00000625244 GIPC1O14908 333 aa15.6■□□□□ 0.09
SNX1-214ENST00000625244 TOP3BO95985 862 aaKnown RBP15.6■□□□□ 0.09
SNX1-214ENST00000625244 ZNF806P0C7X5 589 aa15.6■□□□□ 0.09
SNX1-214ENST00000625244 HOXA11P31270 313 aaPredicted RBP15.6■□□□□ 0.09
SNX1-214ENST00000625244 HOXC13P31276 330 aa15.6■□□□□ 0.09
SNX1-214ENST00000625244 SCNN1GP51170 649 aa15.6■□□□□ 0.09
SNX1-214ENST00000625244 PTH1RQ03431 593 aa15.6■□□□□ 0.09
SNX1-214ENST00000625244 FOXC1Q12948 553 aa15.6■□□□□ 0.09
SNX1-214ENST00000625244 AP3B2Q13367 1082 aa15.6■□□□□ 0.09
SNX1-214ENST00000625244 MTERF2Q49AM1 385 aa15.6■□□□□ 0.09
SNX1-214ENST00000625244 RTP2Q5QGT7 225 aa15.6■□□□□ 0.09
SNX1-214ENST00000625244 CEP68Q76N32 757 aa15.6■□□□□ 0.09
SNX1-214ENST00000625244 SMG8Q8ND04 991 aaKnown RBP15.6■□□□□ 0.09
SNX1-214ENST00000625244 FAM3CQ92520 227 aa15.6■□□□□ 0.09
SNX1-214ENST00000625244 RABGGTAQ92696 567 aa15.6■□□□□ 0.09
SNX1-214ENST00000625244 MCRS1Q96EZ8 462 aa15.6■□□□□ 0.09
SNX1-214ENST00000625244 NLRP4Q96MN2 994 aa15.6■□□□□ 0.09
SNX1-214ENST00000625244 GAD1Q99259 594 aa15.6■□□□□ 0.09
SNX1-214ENST00000625244 COLEC11Q9BWP8 271 aa15.6■□□□□ 0.09
SNX1-214ENST00000625244 ADAM33Q9BZ11 813 aa15.6■□□□□ 0.09
SNX1-214ENST00000625244 RNF39Q9H2S5 420 aa15.6■□□□□ 0.09
SNX1-214ENST00000625244 IFT122Q9HBG6 1241 aa15.6■□□□□ 0.09
SNX1-214ENST00000625244 DISC1Q9NRI5 854 aa15.6■□□□□ 0.09
SNX1-214ENST00000625244 DNMT3BQ9UBC3 853 aaKnown RBP15.6■□□□□ 0.09
SNX1-214ENST00000625244 KCNH3Q9ULD8 1083 aa15.6■□□□□ 0.09
SNX1-214ENST00000625244 SMCO2A6NFE2 343 aa15.59■□□□□ 0.09
SNX1-214ENST00000625244 XYLBO75191 536 aa15.59■□□□□ 0.09
SNX1-214ENST00000625244 CYP3A4P08684 503 aa15.59■□□□□ 0.09
SNX1-214ENST00000625244 CHRNB1P11230 501 aa15.59■□□□□ 0.09
SNX1-214ENST00000625244 HOXA9P31269 272 aa15.59■□□□□ 0.09
SNX1-214ENST00000625244 MLH1P40692 756 aa15.59■□□□□ 0.09
SNX1-214ENST00000625244 CREMQ03060 361 aa15.59■□□□□ 0.09
SNX1-214ENST00000625244 GRM2Q14416 872 aa15.59■□□□□ 0.09
SNX1-214ENST00000625244 PABPC1LQ4VXU2 614 aaKnown RBP15.59■□□□□ 0.09
SNX1-214ENST00000625244 JAKMIP3Q5VZ66 844 aa15.59■□□□□ 0.09
SNX1-214ENST00000625244 NFXL1Q6ZNB6 911 aa15.59■□□□□ 0.09
SNX1-214ENST00000625244 PLEKHM2Q8IWE5 1019 aa15.59■□□□□ 0.09
SNX1-214ENST00000625244 GATA6Q92908 595 aa15.59■□□□□ 0.09
SNX1-214ENST00000625244 ZFP42Q96MM3 310 aa15.59■□□□□ 0.09
SNX1-214ENST00000625244 CLSTN3Q9BQT9 956 aa15.59■□□□□ 0.09
SNX1-214ENST00000625244 SMOC1Q9H4F8 434 aa15.59■□□□□ 0.09
SNX1-214ENST00000625244 ITGA4P13612 1032 aa15.58■□□□□ 0.08
SNX1-214ENST00000625244 DNM2P50570 870 aa15.58■□□□□ 0.08
SNX1-214ENST00000625244 SETQ01105 290 aaPredicted RBP15.58■□□□□ 0.08
SNX1-214ENST00000625244 SLC5A9Q2M3M2 681 aa15.58■□□□□ 0.08
SNX1-214ENST00000625244 PPP1R18Q6NYC8 613 aa15.58■□□□□ 0.08
SNX1-214ENST00000625244 TEX2Q8IWB9 1127 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms