RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 CTGFP29279 349 aa19.04■□□□□ 0.64
PCF11-207ENST00000624931 YWHABP31946 246 aaKnown RBP19.04■□□□□ 0.64
PCF11-207ENST00000624931 FNTAP49354 379 aa19.04■□□□□ 0.64
PCF11-207ENST00000624931 RAPGEF1Q13905 1077 aa19.04■□□□□ 0.64
PCF11-207ENST00000624931 PPP2R5EQ16537 467 aa19.04■□□□□ 0.64
PCF11-207ENST00000624931 FAM153CQ494X1 144 aa19.04■□□□□ 0.64
PCF11-207ENST00000624931 GJC2Q5T442 439 aaPredicted RBP19.04■□□□□ 0.64
PCF11-207ENST00000624931 C1orf186Q6ZWK4 172 aa19.04■□□□□ 0.64
PCF11-207ENST00000624931 FRMD5Q7Z6J6 570 aa19.04■□□□□ 0.64
PCF11-207ENST00000624931 SFR1Q86XK3 245 aa19.04■□□□□ 0.64
PCF11-207ENST00000624931 SYCE1Q8N0S2 351 aa19.04■□□□□ 0.64
PCF11-207ENST00000624931 RDM1Q8NG50 284 aa19.04■□□□□ 0.64
PCF11-207ENST00000624931 P3H4Q92791 437 aa19.04■□□□□ 0.64
PCF11-207ENST00000624931 CAPNS2Q96L46 248 aa19.04■□□□□ 0.64
PCF11-207ENST00000624931 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.04■□□□□ 0.64
PCF11-207ENST00000624931 SLITRK6Q9H5Y7 841 aa19.04■□□□□ 0.64
PCF11-207ENST00000624931 FAM153AQ9UHL3 310 aa19.04■□□□□ 0.64
PCF11-207ENST00000624931 FBXL5Q9UKA1 691 aa19.04■□□□□ 0.64
PCF11-207ENST00000624931 PLAAQ9Y263 795 aa19.04■□□□□ 0.64
PCF11-207ENST00000624931 CAPN7Q9Y6W3 813 aa19.04■□□□□ 0.64
PCF11-207ENST00000624931 LOXHD1Q8IVV2 1947 aa19.04■□□□□ 0.64
PCF11-207ENST00000624931 ARID2Q68CP9 1835 aa19.03■□□□□ 0.64
PCF11-207ENST00000624931 FRMD3A2A2Y4 597 aa19.03■□□□□ 0.64
PCF11-207ENST00000624931 SFI1A8K8P3 1242 aa19.03■□□□□ 0.64
PCF11-207ENST00000624931 KIF4AO95239 1232 aa19.03■□□□□ 0.64
PCF11-207ENST00000624931 LYPLA2O95372 231 aa19.03■□□□□ 0.64
PCF11-207ENST00000624931 FTCDO95954 541 aa19.03■□□□□ 0.64
PCF11-207ENST00000624931 NPEPPSP55786 919 aa19.03■□□□□ 0.64
PCF11-207ENST00000624931 CLUL1Q15846 466 aa19.03■□□□□ 0.64
PCF11-207ENST00000624931 MORN1Q5T089 497 aa19.03■□□□□ 0.64
PCF11-207ENST00000624931 MAATS1Q7Z4T9 603 aa19.03■□□□□ 0.64
PCF11-207ENST00000624931 VPS36Q86VN1 386 aa19.03■□□□□ 0.64
PCF11-207ENST00000624931 CCDC26Q8TAB7 109 aa19.03■□□□□ 0.64
PCF11-207ENST00000624931 KAT2BQ92831 832 aa19.03■□□□□ 0.64
PCF11-207ENST00000624931 CCT8L2Q96SF2 557 aa19.03■□□□□ 0.64
PCF11-207ENST00000624931 HINFPQ9BQA5 517 aa19.03■□□□□ 0.64
PCF11-207ENST00000624931 GANQ9H2C0 597 aa19.03■□□□□ 0.64
PCF11-207ENST00000624931 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.03■□□□□ 0.64
PCF11-207ENST00000624931 DIS3Q9Y2L1 958 aaKnown RBP19.03■□□□□ 0.64
PCF11-207ENST00000624931 GSTTP1A0A1W2PQM5 241 aa19.03■□□□□ 0.64
PCF11-207ENST00000624931 RAD51CO43502 376 aa19.03■□□□□ 0.64
PCF11-207ENST00000624931 SNAI1O95863 264 aaPredicted RBP19.03■□□□□ 0.64
PCF11-207ENST00000624931 RARRES1P49788 294 aa19.03■□□□□ 0.64
PCF11-207ENST00000624931 ATP1A2P50993 1020 aa19.03■□□□□ 0.64
PCF11-207ENST00000624931 HERC4Q5GLZ8 1057 aaPredicted RBP19.03■□□□□ 0.64
PCF11-207ENST00000624931 CEP85LQ5SZL2 805 aa19.03■□□□□ 0.64
PCF11-207ENST00000624931 KCTD16Q68DU8 428 aa19.03■□□□□ 0.64
PCF11-207ENST00000624931 MIS18BP1Q6P0N0 1132 aa19.03■□□□□ 0.64
PCF11-207ENST00000624931 CCDC62Q6P9F0 684 aa19.03■□□□□ 0.64
PCF11-207ENST00000624931 PADI6Q6TGC4 694 aa19.03■□□□□ 0.64
PCF11-207ENST00000624931 MAEAQ7L5Y9 396 aa19.03■□□□□ 0.64
PCF11-207ENST00000624931 C4orf19Q8IY42 314 aa19.03■□□□□ 0.64
PCF11-207ENST00000624931 SH2D3CQ8N5H7 860 aa19.03■□□□□ 0.64
PCF11-207ENST00000624931 MYCBPAPQ8TBZ2 947 aa19.03■□□□□ 0.64
PCF11-207ENST00000624931 MYCBPQ99417 103 aaPredicted RBP19.03■□□□□ 0.64
PCF11-207ENST00000624931 KATNBL1Q9H079 304 aa19.03■□□□□ 0.64
PCF11-207ENST00000624931 PCDHA2Q9Y5H9 948 aa19.03■□□□□ 0.64
PCF11-207ENST00000624931 IGSF9BQ9UPX0 1349 aa19.02■□□□□ 0.64
PCF11-207ENST00000624931 A0A087X0T9 212 aa19.02■□□□□ 0.63
PCF11-207ENST00000624931 PGRMC1O00264 195 aaKnown RBP19.02■□□□□ 0.63
PCF11-207ENST00000624931 STBD1O95210 358 aa19.02■□□□□ 0.63
PCF11-207ENST00000624931 FAM228BP0C875 321 aa19.02■□□□□ 0.63
PCF11-207ENST00000624931 PRKCIP41743 596 aa19.02■□□□□ 0.63
PCF11-207ENST00000624931 GUCY2FP51841 1108 aa19.02■□□□□ 0.63
PCF11-207ENST00000624931 CASP5P51878 434 aa19.02■□□□□ 0.63
PCF11-207ENST00000624931 MNAT1P51948 309 aa19.02■□□□□ 0.63
PCF11-207ENST00000624931 HTRA3P83110 453 aa19.02■□□□□ 0.63
PCF11-207ENST00000624931 PRKCEQ02156 737 aa19.02■□□□□ 0.63
PCF11-207ENST00000624931 DEFB115Q30KQ5 88 aa19.02■□□□□ 0.63
PCF11-207ENST00000624931 TAPT1Q6NXT6 567 aa19.02■□□□□ 0.63
PCF11-207ENST00000624931 ANO5Q75V66 913 aa19.02■□□□□ 0.63
PCF11-207ENST00000624931 FMNL3Q8IVF7 1028 aa19.02■□□□□ 0.63
PCF11-207ENST00000624931 KCTD17Q8N5Z5 321 aa19.02■□□□□ 0.63
PCF11-207ENST00000624931 PCYT2Q99447 389 aa19.02■□□□□ 0.63
PCF11-207ENST00000624931 GOLGA6L7A0A1B0GV03 622 aa19.01■□□□□ 0.63
PCF11-207ENST00000624931 CA12O43570 354 aa19.01■□□□□ 0.63
PCF11-207ENST00000624931 TBCAO75347 108 aaKnown RBP19.01■□□□□ 0.63
PCF11-207ENST00000624931 TXNP10599 105 aaKnown RBP19.01■□□□□ 0.63
PCF11-207ENST00000624931 SMTNP53814 917 aa19.01■□□□□ 0.63
PCF11-207ENST00000624931 MRPS25P82663 173 aaKnown RBP19.01■□□□□ 0.63
PCF11-207ENST00000624931 NEDD9Q14511 834 aa19.01■□□□□ 0.63
PCF11-207ENST00000624931 HLTFQ14527 1009 aaKnown RBP eCLIP19.01■□□□□ 0.63
PCF11-207ENST00000624931 CELF3Q5SZQ8 465 aaKnown RBP19.01■□□□□ 0.63
PCF11-207ENST00000624931 METTL7BQ6UX53 244 aa19.01■□□□□ 0.63
PCF11-207ENST00000624931 ZNF467Q7Z7K2 595 aaPredicted RBP19.01■□□□□ 0.63
PCF11-207ENST00000624931 CCDC50Q8IVM0 306 aa19.01■□□□□ 0.63
PCF11-207ENST00000624931 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.01■□□□□ 0.633e-13■□□□□ 8.5
PCF11-207ENST00000624931 ARHGAP39Q9C0H5 1083 aa19.01■□□□□ 0.63
PCF11-207ENST00000624931 KCTD10Q9H3F6 313 aa19.01■□□□□ 0.63
PCF11-207ENST00000624931 METTL14Q9HCE5 456 aaKnown RBP19.01■□□□□ 0.63
PCF11-207ENST00000624931 FAM114A2Q9NRY5 505 aa19.01■□□□□ 0.63
PCF11-207ENST00000624931 FLRT1Q9NZU1 646 aa19.01■□□□□ 0.63
PCF11-207ENST00000624931 SUCLA2Q9P2R7 463 aaPredicted RBP19.01■□□□□ 0.63
PCF11-207ENST00000624931 DBR1Q9UK59 544 aaKnown RBP19.01■□□□□ 0.63
PCF11-207ENST00000624931 MGAMO43451 1857 aa19■□□□□ 0.63
PCF11-207ENST00000624931 LOC102724159A0A0B4J2E5 919 aa19■□□□□ 0.63
PCF11-207ENST00000624931 C11orf97A0A1B0GVM6 126 aaPredicted RBP19■□□□□ 0.63
PCF11-207ENST00000624931 GMNCA6NCL1 334 aa19■□□□□ 0.63
PCF11-207ENST00000624931 KCNK3O14649 394 aa19■□□□□ 0.63
PCF11-207ENST00000624931 ATG7O95352 703 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms