RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 GPR3P46089 330 aa6.13□□□□□ -1.43
BRCA1-229ENST00000621897 MST1LQ2TV78 715 aa6.13□□□□□ -1.43
BRCA1-229ENST00000621897 METTL24Q5JXM2 366 aa6.13□□□□□ -1.43
BRCA1-229ENST00000621897 SPATS2Q86XZ4 545 aaKnown RBP6.13□□□□□ -1.43
BRCA1-229ENST00000621897 SYT12Q8IV01 421 aa6.13□□□□□ -1.43
BRCA1-229ENST00000621897 ZNF276Q8N554 614 aa6.13□□□□□ -1.43
BRCA1-229ENST00000621897 REPS2Q8NFH8 660 aa6.13□□□□□ -1.43
BRCA1-229ENST00000621897 CPT1CQ8TCG5 803 aa6.13□□□□□ -1.43
BRCA1-229ENST00000621897 SLC25A43Q8WUT9 341 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-229ENST00000621897 ZNF480Q8WV37 535 aa6.13□□□□□ -1.43
BRCA1-229ENST00000621897 AHCYL2Q96HN2 611 aaKnown RBP6.13□□□□□ -1.43
BRCA1-229ENST00000621897 NRDE2Q9H7Z3 1164 aa6.13□□□□□ -1.43
BRCA1-229ENST00000621897 IFT122Q9HBG6 1241 aa6.13□□□□□ -1.43
BRCA1-229ENST00000621897 SCOCQ9UIL1 159 aa6.13□□□□□ -1.43
BRCA1-229ENST00000621897 HDAC5Q9UQL6 1122 aa6.13□□□□□ -1.43
BRCA1-229ENST00000621897 PRKAB1Q9Y478 270 aa6.13□□□□□ -1.43
BRCA1-229ENST00000621897 RPTORQ8N122 1335 aa6.13□□□□□ -1.43
BRCA1-229ENST00000621897 LEFTY2O00292 366 aa6.12□□□□□ -1.43
BRCA1-229ENST00000621897 SCAF4O95104 1147 aaKnown RBP6.12□□□□□ -1.43
BRCA1-229ENST00000621897 ADH4P08319 380 aa6.12□□□□□ -1.43
BRCA1-229ENST00000621897 ERVK-21P61565 698 aa6.12□□□□□ -1.43
BRCA1-229ENST00000621897 ADRM1Q16186 407 aa6.12□□□□□ -1.43
BRCA1-229ENST00000621897 MFSD14BQ5SR56 506 aa6.12□□□□□ -1.43
BRCA1-229ENST00000621897 BTNL9Q6UXG8 535 aa6.12□□□□□ -1.43
BRCA1-229ENST00000621897 Q6ZPA2 131 aa6.12□□□□□ -1.43
BRCA1-229ENST00000621897 Q6ZVL8 140 aa6.12□□□□□ -1.43
BRCA1-229ENST00000621897 AMER2Q8N7J2 671 aa6.12□□□□□ -1.43
BRCA1-229ENST00000621897 FBXO18Q8NFZ0 1043 aa6.12□□□□□ -1.43
BRCA1-229ENST00000621897 NDC1Q9BTX1 674 aa6.12□□□□□ -1.43
BRCA1-229ENST00000621897 DMRT3Q9NQL9 472 aa6.12□□□□□ -1.43
BRCA1-229ENST00000621897 CCM2LQ9NUG4 571 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-229ENST00000621897 AHRRA9YTQ3 701 aa6.11□□□□□ -1.43
BRCA1-229ENST00000621897 AKR1B10O60218 316 aa6.11□□□□□ -1.43
BRCA1-229ENST00000621897 HSP90B1P14625 803 aaKnown RBP6.11□□□□□ -1.43
BRCA1-229ENST00000621897 CPEP16870 476 aa6.11□□□□□ -1.43
BRCA1-229ENST00000621897 KRT4P19013 534 aa6.11□□□□□ -1.43
BRCA1-229ENST00000621897 CRHR1P34998 444 aa6.11□□□□□ -1.43
BRCA1-229ENST00000621897 MRGPREQ86SM8 312 aa6.11□□□□□ -1.43
BRCA1-229ENST00000621897 LDLRAD3Q86YD5 345 aa6.11□□□□□ -1.43
BRCA1-229ENST00000621897 SLC35B2Q8TB61 432 aa6.11□□□□□ -1.43
BRCA1-229ENST00000621897 KCNH6Q9H252 994 aa6.11□□□□□ -1.43
BRCA1-229ENST00000621897 SPON1Q9HCB6 807 aa6.11□□□□□ -1.43
BRCA1-229ENST00000621897 EIF2B4Q9UI10 523 aaKnown RBP6.11□□□□□ -1.43
BRCA1-229ENST00000621897 PRR5-ARHGAP8B1AHC4 643 aa6.1□□□□□ -1.43
BRCA1-229ENST00000621897 TRIM24O15164 1050 aa6.1□□□□□ -1.43
BRCA1-229ENST00000621897 GASTP01350 101 aa6.1□□□□□ -1.43
BRCA1-229ENST00000621897 OSMP13725 252 aa6.1□□□□□ -1.43
BRCA1-229ENST00000621897 FAM189BP81408 668 aa6.1□□□□□ -1.43
BRCA1-229ENST00000621897 PPP3CAQ08209 521 aa6.1□□□□□ -1.43
BRCA1-229ENST00000621897 RNF219Q5W0B1 726 aaPredicted RBP6.1□□□□□ -1.43
BRCA1-229ENST00000621897 RHOUQ7L0Q8 258 aa6.1□□□□□ -1.43
BRCA1-229ENST00000621897 TRMT2AQ8IZ69 625 aaKnown RBP6.1□□□□□ -1.43
BRCA1-229ENST00000621897 RNF169Q8NCN4 708 aa6.1□□□□□ -1.43
BRCA1-229ENST00000621897 GPR156Q8NFN8 814 aa6.1□□□□□ -1.43
BRCA1-229ENST00000621897 ATL2Q8NHH9 583 aa6.1□□□□□ -1.43
BRCA1-229ENST00000621897 HOXB13Q92826 284 aaPredicted RBP6.1□□□□□ -1.43
BRCA1-229ENST00000621897 PAWRQ96IZ0 340 aaKnown RBP6.1□□□□□ -1.43
BRCA1-229ENST00000621897 ACE2Q9BYF1 805 aaPredicted RBP6.1□□□□□ -1.43
BRCA1-229ENST00000621897 IKZF4Q9H2S9 585 aa6.1□□□□□ -1.43
BRCA1-229ENST00000621897 PHLDB1Q86UU1 1377 aa6.09□□□□□ -1.43
BRCA1-229ENST00000621897 TBKBP1A7MCY6 615 aa6.09□□□□□ -1.43
BRCA1-229ENST00000621897 B5MCH6 92 aa6.09□□□□□ -1.43
BRCA1-229ENST00000621897 PHF2O75151 1096 aa6.09□□□□□ -1.43
BRCA1-229ENST00000621897 PTGS2P35354 604 aa6.09□□□□□ -1.43
BRCA1-229ENST00000621897 MTNR1BP49286 362 aa6.09□□□□□ -1.43
BRCA1-229ENST00000621897 TGFB2P61812 414 aa6.09□□□□□ -1.43
BRCA1-229ENST00000621897 DDX42Q86XP3 938 aaKnown RBP eCLIP6.09□□□□□ -1.43
BRCA1-229ENST00000621897 OR7D4Q8NG98 312 aa6.09□□□□□ -1.43
BRCA1-229ENST00000621897 OR10H5Q8NGA6 315 aa6.09□□□□□ -1.43
BRCA1-229ENST00000621897 HAS1Q92839 578 aa6.09□□□□□ -1.43
BRCA1-229ENST00000621897 FATE1Q969F0 183 aa6.09□□□□□ -1.43
BRCA1-229ENST00000621897 LENG9Q96B70 501 aa6.09□□□□□ -1.43
BRCA1-229ENST00000621897 CHFRQ96EP1 664 aa6.09□□□□□ -1.43
BRCA1-229ENST00000621897 MLST8Q9BVC4 326 aa6.09□□□□□ -1.43
BRCA1-229ENST00000621897 TEX101Q9BY14 249 aa6.09□□□□□ -1.43
BRCA1-229ENST00000621897 GREM2Q9H772 168 aa6.09□□□□□ -1.43
BRCA1-229ENST00000621897 DNAJC28Q9NX36 388 aa6.09□□□□□ -1.43
BRCA1-229ENST00000621897 TRPM5Q9NZQ8 1165 aa6.09□□□□□ -1.43
BRCA1-229ENST00000621897 MTHFD2P13995 350 aa6.08□□□□□ -1.44
BRCA1-229ENST00000621897 PTPN7P35236 360 aa6.08□□□□□ -1.44
BRCA1-229ENST00000621897 FLT3LGP49771 235 aa6.08□□□□□ -1.44
BRCA1-229ENST00000621897 NHLH2Q02577 135 aa6.08□□□□□ -1.44
BRCA1-229ENST00000621897 DPTQ07507 201 aa6.08□□□□□ -1.44
BRCA1-229ENST00000621897 FAPQ12884 760 aa6.08□□□□□ -1.44
BRCA1-229ENST00000621897 BMT2Q1RMZ1 405 aa6.08□□□□□ -1.44
BRCA1-229ENST00000621897 MUM1L1Q5H9M0 696 aa6.08□□□□□ -1.44
BRCA1-229ENST00000621897 DRICH1Q6PGQ1 229 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-229ENST00000621897 PDZD4Q76G19 769 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-229ENST00000621897 RPUSD2Q8IZ73 545 aaKnown RBP6.08□□□□□ -1.44
BRCA1-229ENST00000621897 TFAP2CQ92754 450 aa6.08□□□□□ -1.44
BRCA1-229ENST00000621897 BCO1Q9HAY6 547 aa6.08□□□□□ -1.44
BRCA1-229ENST00000621897 FZD1Q9UP38 647 aa6.08□□□□□ -1.44
BRCA1-229ENST00000621897 CHST2Q9Y4C5 530 aa6.08□□□□□ -1.44
BRCA1-229ENST00000621897 ATRNL1Q5VV63 1379 aa6.07□□□□□ -1.44
BRCA1-229ENST00000621897 CXorf49A8MYA2 514 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-229ENST00000621897 K7ESF4 209 aa6.07□□□□□ -1.44
BRCA1-229ENST00000621897 ZNF185O15231 689 aa6.07□□□□□ -1.44
BRCA1-229ENST00000621897 RECQL4O94761 1208 aa6.07□□□□□ -1.44
BRCA1-229ENST00000621897 ZSCAN20P17040 1043 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-229ENST00000621897 ECHS1P30084 290 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms