RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 RNF169Q8NCN4 708 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 ATP6V1G3Q96LB4 118 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 RABEP2Q9H5N1 569 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 PXMP2Q9NR77 195 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 NKIRAS1Q9NYS0 192 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 IGLV3-22A0A075B6J6 115 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 MAPK13O15264 365 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 CYP26A1O43174 497 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 GMPSP49915 693 aaPredicted RBP10.66□□□□□ -0.7
CDH23-213ENST00000619887 KCTD2Q14681 263 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 ARMC9Q7Z3E5 817 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 TMC2Q8TDI7 906 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.66□□□□□ -0.7
CDH23-213ENST00000619887 PPANQ9NQ55 473 aaKnown RBP10.66□□□□□ -0.7
CDH23-213ENST00000619887 ANAPC7Q9UJX3 599 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 PCDHA2Q9Y5H9 948 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 FOXN3O00409 490 aaPredicted RBP10.65□□□□□ -0.7
CDH23-213ENST00000619887 CNGA1P29973 690 aa10.65□□□□□ -0.7
CDH23-213ENST00000619887 BACE1P56817 501 aa10.65□□□□□ -0.7
CDH23-213ENST00000619887 SPIRE1Q08AE8 756 aa10.65□□□□□ -0.7
CDH23-213ENST00000619887 PGM5Q15124 567 aa10.65□□□□□ -0.7
CDH23-213ENST00000619887 EIF1ADQ8N9N8 165 aaKnown RBP10.65□□□□□ -0.7
CDH23-213ENST00000619887 CABS1Q96KC9 395 aa10.65□□□□□ -0.7
CDH23-213ENST00000619887 FERMT1Q9BQL6 677 aa10.65□□□□□ -0.7
CDH23-213ENST00000619887 AGO2Q9UKV8 859 aaKnown RBP10.65□□□□□ -0.7
CDH23-213ENST00000619887 COMMD10Q9Y6G5 202 aa10.65□□□□□ -0.7
CDH23-213ENST00000619887 DLEC1Q9Y238 1755 aa10.65□□□□□ -0.7
CDH23-213ENST00000619887 YDJCA8MPS7 323 aa10.65□□□□□ -0.7
CDH23-213ENST00000619887 DDX3XO00571 662 aaKnown RBP eCLIP10.65□□□□□ -0.7
CDH23-213ENST00000619887 GZMAP12544 262 aa10.65□□□□□ -0.7
CDH23-213ENST00000619887 ADCY8P40145 1251 aa10.65□□□□□ -0.7
CDH23-213ENST00000619887 HSD17B4P51659 736 aa10.65□□□□□ -0.7
CDH23-213ENST00000619887 AP3M2P53677 418 aa10.65□□□□□ -0.7
CDH23-213ENST00000619887 MTMR14Q8NCE2 650 aa10.65□□□□□ -0.7
CDH23-213ENST00000619887 LENG9Q96B70 501 aa10.65□□□□□ -0.7
CDH23-213ENST00000619887 CBWD1Q9BRT8 395 aa10.65□□□□□ -0.7
CDH23-213ENST00000619887 SLC38A10Q9HBR0 1119 aa10.65□□□□□ -0.7
CDH23-213ENST00000619887 UBIAD1Q9Y5Z9 338 aa10.65□□□□□ -0.7
CDH23-213ENST00000619887 DAPK3O43293 454 aa10.65□□□□□ -0.71
CDH23-213ENST00000619887 TGFB1I1O43294 461 aa10.65□□□□□ -0.71
CDH23-213ENST00000619887 TLR2O60603 784 aa10.65□□□□□ -0.71
CDH23-213ENST00000619887 IREB2P48200 963 aaKnown RBP10.65□□□□□ -0.71
CDH23-213ENST00000619887 OAZ1P54368 228 aa10.65□□□□□ -0.71
CDH23-213ENST00000619887 ZNF211Q13398 564 aaPredicted RBP10.65□□□□□ -0.71
CDH23-213ENST00000619887 IRF2BP2Q7Z5L9 587 aa10.65□□□□□ -0.71
CDH23-213ENST00000619887 MRRFQ96E11 262 aaKnown RBP10.65□□□□□ -0.71
CDH23-213ENST00000619887 KCNK9Q9NPC2 374 aa10.65□□□□□ -0.71
CDH23-213ENST00000619887 FANCGO15287 622 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 LYPLA2O95372 231 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 ATP2A2P16615 1042 aaKnown RBP10.64□□□□□ -0.71
CDH23-213ENST00000619887 GARTP22102 1010 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 SNX16P57768 344 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 PRKCEQ02156 737 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 ADCY2Q08462 1091 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 KCNA1Q09470 495 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 HADHQ16836 314 aaKnown RBP10.64□□□□□ -0.71
CDH23-213ENST00000619887 RIN2Q8WYP3 895 aaPredicted RBP10.64□□□□□ -0.71
CDH23-213ENST00000619887 ANKRD36BP1Q96IX9 119 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 ZIM3Q96PE6 472 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 RPS6KC1Q96S38 1066 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 SH2D3AQ9BRG2 576 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 MIS12Q9H081 205 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 HACL1Q9UJ83 578 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 GTF3C4Q9UKN8 822 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 ALG6Q9Y672 507 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 COL2A1P02458 1487 aaPredicted RBP10.64□□□□□ -0.71
CDH23-213ENST00000619887 RASSF10A6NK89 507 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 PHF2O75151 1096 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 ZC3H11AO75152 810 aaKnown RBP eCLIP10.64□□□□□ -0.71
CDH23-213ENST00000619887 COPB2P35606 906 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 SLC1A1P43005 524 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 ZNF131P52739 623 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 SLC30A10Q6XR72 485 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 CCDC91Q7Z6B0 441 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 ZNF677Q86XU0 584 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 CHST13Q8NET6 341 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 CCHCR1Q8TD31 782 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 SPIRE2Q8WWL2 714 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 CASKIN2Q8WXE0 1202 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 SNX24Q9Y343 169 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 ATP8B3O60423 1300 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 VIMP08670 466 aaKnown RBP10.64□□□□□ -0.71
CDH23-213ENST00000619887 NPTX2P47972 431 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 LACTBP83111 547 aaPredicted RBP10.64□□□□□ -0.71
CDH23-213ENST00000619887 EFCAB13Q8IY85 973 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 CACNA2D3Q8IZS8 1091 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 GOLPH3Q9H4A6 298 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 FAM53CQ9NYF3 392 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 RBAKQ9NYW8 714 aaPredicted RBP10.64□□□□□ -0.71
CDH23-213ENST00000619887 ADAM22Q9P0K1 906 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 PTPN22Q9Y2R2 807 aa10.64□□□□□ -0.71
CDH23-213ENST00000619887 CLDN3O15551 220 aa10.63□□□□□ -0.71
CDH23-213ENST00000619887 TTI1O43156 1089 aa10.63□□□□□ -0.71
CDH23-213ENST00000619887 PTGER2P43116 358 aa10.63□□□□□ -0.71
CDH23-213ENST00000619887 PDCLQ13371 301 aa10.63□□□□□ -0.71
CDH23-213ENST00000619887 LLGL1Q15334 1064 aa10.63□□□□□ -0.71
CDH23-213ENST00000619887 ASTE1Q2TB18 679 aaPredicted RBP10.63□□□□□ -0.71
CDH23-213ENST00000619887 C6orf118Q5T5N4 469 aa10.63□□□□□ -0.71
CDH23-213ENST00000619887 SIAH1Q8IUQ4 282 aa10.63□□□□□ -0.71
CDH23-213ENST00000619887 C12orf56Q8IXR9 622 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms