RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 SPOPO43791 374 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 PEX1O43933 1283 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 OR5F1O95221 314 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 CKBP12277 381 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 U2AF2P26368 475 aaKnown RBP eCLIP4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 IDUAP35475 653 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 NFKB2Q00653 900 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 DPYDQ12882 1025 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 MEA1Q16626 185 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 SWI5Q1ZZU3 235 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 C2orf27AQ580R0 203 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 SLC27A3Q5K4L6 730 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 C6orf118Q5T5N4 469 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 NCAPH2Q6IBW4 605 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 TMEM53Q6P2H8 277 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 PPP1R21Q6ZMI0 780 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 NLRP9Q7RTR0 991 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 SLC41A1Q8IVJ1 513 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 CD302Q8IX05 232 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 CTCFLQ8NI51 663 aaPredicted RBP4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 PHOSPHO2Q8TCD6 241 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 NOC3LQ8WTT2 800 aaKnown RBP4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 HERVK_113Q902F9 699 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 SAAL1Q96ER3 474 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 SLC47A1Q96FL8 570 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 PARD6BQ9BYG5 372 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 MCOLN1Q9GZU1 580 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 KIF9Q9HAQ2 790 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 PDE11AQ9HCR9 933 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 WDR6Q9NNW5 1121 aaKnown RBP4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 HPS4Q9NQG7 708 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 INTS10Q9NVR2 710 aaKnown RBP4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 TBC1D14Q9P2M4 693 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 ZNF180Q9UJW8 692 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 ZNF536O15090 1300 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 TARM1B6A8C7 271 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 KRIT1O00522 736 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 TMEM127O75204 238 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 RNF8O76064 485 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 ECDO95905 644 aaPredicted RBP4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 SERPINC1P01008 464 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 PENKP01210 267 aaPredicted RBP4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 ATP5BP06576 529 aaKnown RBP4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 NR3C2P08235 984 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 TARSP26639 723 aaKnown RBP4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 AXLP30530 894 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 HNF4AP41235 474 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 GRK6P43250 576 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 SLC26A5P58743 744 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 NKX3-2P78367 333 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 ROR2Q01974 943 aaKnown RBP4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 ZBTB16Q05516 673 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 NCBP1Q09161 790 aaKnown RBP4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 FAM98CQ17RN3 349 aaKnown RBP4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 C4orf50Q6ZRC1 276 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 GALNTL5Q7Z4T8 443 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 KIAA1328Q86T90 577 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 ZNF565Q8N9K5 539 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 XXYLT1Q8NBI6 393 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 GOLM1Q8NBJ4 401 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 TSEN2Q8NCE0 465 aaKnown RBP4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 NKX2-3Q8TAU0 364 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 ZNF516Q92618 1163 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 CENPIQ92674 756 aaPredicted RBP4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 ATP6V0A1Q93050 837 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 WDR24Q96S15 920 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 TCF25Q9BQ70 676 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 TM9SF3Q9HD45 589 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 SH2B1Q9NRF2 756 aaPredicted RBP4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 RRN3Q9NYV6 651 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 CABP1Q9NZU7 370 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 DSEQ9UL01 958 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 EFR3BQ9Y2G0 817 aa4.41□□□□□ -1.7
UBE2D3-233ENST00000618836 SFI1A8K8P3 1242 aa4.4□□□□□ -1.7
UBE2D3-233ENST00000618836 B4E171 279 aa4.4□□□□□ -1.7
UBE2D3-233ENST00000618836 MICAL2O94851 1124 aa4.4□□□□□ -1.7
UBE2D3-233ENST00000618836 ALAS2P22557 587 aa4.4□□□□□ -1.7
UBE2D3-233ENST00000618836 HOXA11P31270 313 aaPredicted RBP4.4□□□□□ -1.7
UBE2D3-233ENST00000618836 SCNN1BP51168 640 aa4.4□□□□□ -1.7
UBE2D3-233ENST00000618836 SCNN1GP51170 649 aa4.4□□□□□ -1.7
UBE2D3-233ENST00000618836 ALDH3A2P51648 485 aa4.4□□□□□ -1.7
UBE2D3-233ENST00000618836 CENPCQ03188 943 aa4.4□□□□□ -1.7
UBE2D3-233ENST00000618836 ASIC2Q16515 512 aa4.4□□□□□ -1.7
UBE2D3-233ENST00000618836 LRRC23Q53EV4 343 aaPredicted RBP4.4□□□□□ -1.7
UBE2D3-233ENST00000618836 TCTE1Q5JU00 501 aa4.4□□□□□ -1.7
UBE2D3-233ENST00000618836 ZMYM1Q5SVZ6 1142 aa4.4□□□□□ -1.7
UBE2D3-233ENST00000618836 MIS18BP1Q6P0N0 1132 aa4.4□□□□□ -1.7
UBE2D3-233ENST00000618836 ARHGAP11AQ6P4F7 1023 aa4.4□□□□□ -1.7
UBE2D3-233ENST00000618836 TRAF7Q6Q0C0 670 aa4.4□□□□□ -1.7
UBE2D3-233ENST00000618836 HHIPL2Q6UWX4 724 aa4.4□□□□□ -1.7
UBE2D3-233ENST00000618836 CCDC149Q6ZUS6 474 aa4.4□□□□□ -1.7
UBE2D3-233ENST00000618836 FAM83AQ86UY5 434 aa4.4□□□□□ -1.7
UBE2D3-233ENST00000618836 RETREG3Q86VR2 466 aa4.4□□□□□ -1.7
UBE2D3-233ENST00000618836 CADM3Q8N126 398 aa4.4□□□□□ -1.7
UBE2D3-233ENST00000618836 NEDD1Q8NHV4 660 aa4.4□□□□□ -1.7
UBE2D3-233ENST00000618836 FBF1Q8TES7 1133 aa4.4□□□□□ -1.7
UBE2D3-233ENST00000618836 RNF139Q8WU17 664 aa4.4□□□□□ -1.7
UBE2D3-233ENST00000618836 LPIN2Q92539 896 aa4.4□□□□□ -1.7
UBE2D3-233ENST00000618836 DHX58Q96C10 678 aa4.4□□□□□ -1.7
UBE2D3-233ENST00000618836 SLC10A4Q96EP9 437 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms