RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 DIRC3C9JPN6 131 aa4.36□□□□□ -1.71
TARDBP-220ENST00000618606 NCR1O76036 304 aa4.36□□□□□ -1.71
TARDBP-220ENST00000618606 HSP90B1P14625 803 aaKnown RBP4.36□□□□□ -1.71
TARDBP-220ENST00000618606 ZSCAN20P17040 1043 aaPredicted RBP4.36□□□□□ -1.71
TARDBP-220ENST00000618606 XPAP23025 273 aaPredicted RBP4.36□□□□□ -1.71
TARDBP-220ENST00000618606 BEAN1Q3B7T3 259 aa4.36□□□□□ -1.71
TARDBP-220ENST00000618606 C19orf54Q5BKX5 351 aa4.36□□□□□ -1.71
TARDBP-220ENST00000618606 BTNL9Q6UXG8 535 aa4.36□□□□□ -1.71
TARDBP-220ENST00000618606 SYT12Q8IV01 421 aa4.36□□□□□ -1.71
TARDBP-220ENST00000618606 LYSMD2Q8IV50 215 aa4.36□□□□□ -1.71
TARDBP-220ENST00000618606 SLC41A1Q8IVJ1 513 aa4.36□□□□□ -1.71
TARDBP-220ENST00000618606 RSAD2Q8WXG1 361 aa4.36□□□□□ -1.71
TARDBP-220ENST00000618606 MRFAP1L1Q96HT8 127 aa4.36□□□□□ -1.71
TARDBP-220ENST00000618606 THG1LQ9NWX6 298 aaKnown RBP4.36□□□□□ -1.71
TARDBP-220ENST00000618606 ANKFY1Q9P2R3 1169 aa4.36□□□□□ -1.71
TARDBP-220ENST00000618606 ST20-MTHFSA0A0A6YYL1 179 aa4.35□□□□□ -1.71
TARDBP-220ENST00000618606 PRR5-ARHGAP8B1AHC4 643 aa4.35□□□□□ -1.71
TARDBP-220ENST00000618606 KPNA6O60684 536 aa4.35□□□□□ -1.71
TARDBP-220ENST00000618606 C1RP00736 705 aa4.35□□□□□ -1.71
TARDBP-220ENST00000618606 LTA4HP09960 611 aaKnown RBP4.35□□□□□ -1.71
TARDBP-220ENST00000618606 NEK4P51957 841 aa4.35□□□□□ -1.71
TARDBP-220ENST00000618606 KPNA1P52294 538 aaPredicted RBP4.35□□□□□ -1.71
TARDBP-220ENST00000618606 SEC24CP53992 1094 aa4.35□□□□□ -1.71
TARDBP-220ENST00000618606 NRG3P56975 720 aa4.35□□□□□ -1.71
TARDBP-220ENST00000618606 KRTAP10-7P60409 375 aaPredicted RBP4.35□□□□□ -1.71
TARDBP-220ENST00000618606 APBA1Q02410 837 aa4.35□□□□□ -1.71
TARDBP-220ENST00000618606 TCEA2Q15560 299 aa4.35□□□□□ -1.71
TARDBP-220ENST00000618606 LRRTM3Q86VH5 581 aa4.35□□□□□ -1.71
TARDBP-220ENST00000618606 BOLLQ8N9W6 283 aaKnown RBP4.35□□□□□ -1.71
TARDBP-220ENST00000618606 SMC1BQ8NDV3 1235 aa4.35□□□□□ -1.71
TARDBP-220ENST00000618606 SIMC1Q8NDZ2 872 aa4.35□□□□□ -1.71
TARDBP-220ENST00000618606 ANKS1AQ92625 1134 aa4.35□□□□□ -1.71
TARDBP-220ENST00000618606 FERMT2Q96AC1 680 aa4.35□□□□□ -1.71
TARDBP-220ENST00000618606 LRFN3Q9BTN0 628 aa4.35□□□□□ -1.71
TARDBP-220ENST00000618606 WNT8AQ9H1J5 351 aa4.35□□□□□ -1.71
TARDBP-220ENST00000618606 TESQ9UGI8 421 aaKnown RBP4.35□□□□□ -1.71
TARDBP-220ENST00000618606 EVLQ9UI08 416 aaPredicted RBP4.35□□□□□ -1.71
TARDBP-220ENST00000618606 PRSS50Q9UI38 385 aa4.35□□□□□ -1.71
TARDBP-220ENST00000618606 COL3A1P02461 1466 aaPredicted RBP4.35□□□□□ -1.71
TARDBP-220ENST00000618606 PIPSLA2A3N6 862 aa4.34□□□□□ -1.71
TARDBP-220ENST00000618606 TBKBP1A7MCY6 615 aa4.34□□□□□ -1.71
TARDBP-220ENST00000618606 NDUFA10O95299 355 aa4.34□□□□□ -1.71
TARDBP-220ENST00000618606 CLEC2LP0C7M8 214 aa4.34□□□□□ -1.71
TARDBP-220ENST00000618606 LSP1P33241 339 aa4.34□□□□□ -1.71
TARDBP-220ENST00000618606 PTH2RP49190 550 aa4.34□□□□□ -1.71
TARDBP-220ENST00000618606 RNASE9P60153 205 aaKnown RBP4.34□□□□□ -1.71
TARDBP-220ENST00000618606 NHLH2Q02577 135 aa4.34□□□□□ -1.71
TARDBP-220ENST00000618606 MGAT5Q09328 741 aa4.34□□□□□ -1.71
TARDBP-220ENST00000618606 FOXF2Q12947 444 aa4.34□□□□□ -1.71
TARDBP-220ENST00000618606 PCBP1Q15365 356 aaKnown RBP eCLIP4.34□□□□□ -1.71
TARDBP-220ENST00000618606 TERF2Q15554 542 aa4.34□□□□□ -1.71
TARDBP-220ENST00000618606 METRNLQ641Q3 311 aa4.34□□□□□ -1.71
TARDBP-220ENST00000618606 KRTAP5-11Q6L8G4 156 aa4.34□□□□□ -1.71
TARDBP-220ENST00000618606 LMBR1LQ6UX01 489 aa4.34□□□□□ -1.71
TARDBP-220ENST00000618606 PLXDC1Q8IUK5 500 aa4.34□□□□□ -1.71
TARDBP-220ENST00000618606 SPATA5L1Q9BVQ7 753 aa4.34□□□□□ -1.71
TARDBP-220ENST00000618606 TEX101Q9BY14 249 aa4.34□□□□□ -1.71
TARDBP-220ENST00000618606 SPON1Q9HCB6 807 aa4.34□□□□□ -1.71
TARDBP-220ENST00000618606 ZMYM3Q14202 1370 aa4.34□□□□□ -1.71
TARDBP-220ENST00000618606 LCHNA4D1U4 455 aa4.33□□□□□ -1.72
TARDBP-220ENST00000618606 MYADML2A6NDP7 307 aa4.33□□□□□ -1.72
TARDBP-220ENST00000618606 HKR1P10072 659 aa4.33□□□□□ -1.72
TARDBP-220ENST00000618606 RBP3P10745 1247 aa4.33□□□□□ -1.72
TARDBP-220ENST00000618606 MANFP55145 182 aaKnown RBP4.33□□□□□ -1.72
TARDBP-220ENST00000618606 MEF2AQ02078 507 aaPredicted RBP4.33□□□□□ -1.72
TARDBP-220ENST00000618606 FOXI1Q12951 378 aa4.33□□□□□ -1.72
TARDBP-220ENST00000618606 BMT2Q1RMZ1 405 aa4.33□□□□□ -1.72
TARDBP-220ENST00000618606 ANKS6Q68DC2 871 aa4.33□□□□□ -1.72
TARDBP-220ENST00000618606 FRMD7Q6ZUT3 714 aa4.33□□□□□ -1.72
TARDBP-220ENST00000618606 GLB1L2Q8IW92 636 aa4.33□□□□□ -1.72
TARDBP-220ENST00000618606 CMTR2Q8IYT2 770 aaKnown RBP4.33□□□□□ -1.72
TARDBP-220ENST00000618606 SCARB1Q8WTV0 552 aa4.33□□□□□ -1.72
TARDBP-220ENST00000618606 SNX33Q8WV41 574 aa4.33□□□□□ -1.72
TARDBP-220ENST00000618606 NINJ1Q92982 152 aa4.33□□□□□ -1.72
TARDBP-220ENST00000618606 CAVIN3Q969G5 261 aa4.33□□□□□ -1.72
TARDBP-220ENST00000618606 RNPC3Q96LT9 517 aaKnown RBP4.33□□□□□ -1.72
TARDBP-220ENST00000618606 KRTAP1-5Q9BYS1 174 aa4.33□□□□□ -1.72
TARDBP-220ENST00000618606 ZSWIM4Q9H7M6 989 aa4.33□□□□□ -1.72
TARDBP-220ENST00000618606 ALG13Q9NP73 1137 aaKnown RBP4.33□□□□□ -1.72
TARDBP-220ENST00000618606 SPTLC3Q9NUV7 552 aa4.33□□□□□ -1.72
TARDBP-220ENST00000618606 CD2APQ9Y5K6 639 aa4.33□□□□□ -1.72
TARDBP-220ENST00000618606 PPP2R3BQ9Y5P8 575 aa4.33□□□□□ -1.72
TARDBP-220ENST00000618606 B5MCH6 92 aa4.32□□□□□ -1.72
TARDBP-220ENST00000618606 GASTP01350 101 aa4.32□□□□□ -1.72
TARDBP-220ENST00000618606 MGAT1P26572 445 aa4.32□□□□□ -1.72
TARDBP-220ENST00000618606 CXCR5P32302 372 aa4.32□□□□□ -1.72
TARDBP-220ENST00000618606 SCNN1BP51168 640 aa4.32□□□□□ -1.72
TARDBP-220ENST00000618606 OCRLQ01968 901 aa4.32□□□□□ -1.72
TARDBP-220ENST00000618606 GUCY1B3Q02153 619 aa4.32□□□□□ -1.72
TARDBP-220ENST00000618606 MAPK7Q13164 816 aa4.32□□□□□ -1.72
TARDBP-220ENST00000618606 TRIM25Q14258 630 aaKnown RBP4.32□□□□□ -1.72
TARDBP-220ENST00000618606 C21orf62-AS1Q17RA5 79 aa4.32□□□□□ -1.72
TARDBP-220ENST00000618606 PDCD4Q53EL6 469 aaKnown RBP4.32□□□□□ -1.72
TARDBP-220ENST00000618606 FAM102AQ5T9C2 384 aaPredicted RBP4.32□□□□□ -1.72
TARDBP-220ENST00000618606 EFCAB12Q6NXP0 572 aa4.32□□□□□ -1.72
TARDBP-220ENST00000618606 ABHD15Q6UXT9 468 aa4.32□□□□□ -1.72
TARDBP-220ENST00000618606 SRRM1Q8IYB3 904 aaKnown RBP4.32□□□□□ -1.72
TARDBP-220ENST00000618606 C9orf106Q8NAJ2 232 aa4.32□□□□□ -1.72
TARDBP-220ENST00000618606 OR10H5Q8NGA6 315 aa4.32□□□□□ -1.72
TARDBP-220ENST00000618606 SREK1Q8WXA9 508 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms