RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 DKK4Q9UBT3 224 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 DNAJB4Q9UDY4 337 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 TCEAL9Q9UHQ7 104 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 RCAN3Q9UKA8 241 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.16□□□□□ -1.58
SNCA-213ENST00000618500 DENND4CQ5VZ89 1909 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 SF3B1O75533 1304 aaKnown RBP eCLIP5.15□□□□□ -1.583e-6■■■■■ 137.9
SNCA-213ENST00000618500 CHURC1-FNTBB4DL54 471 aa5.15□□□□□ -1.58
SNCA-213ENST00000618500 SH2B2O14492 632 aaPredicted RBP5.15□□□□□ -1.58
SNCA-213ENST00000618500 IFIT3O14879 490 aaKnown RBP5.15□□□□□ -1.58
SNCA-213ENST00000618500 B4GALT3O60512 393 aa5.15□□□□□ -1.58
SNCA-213ENST00000618500 CHRNB1P11230 501 aa5.15□□□□□ -1.58
SNCA-213ENST00000618500 PBX3P40426 434 aa5.15□□□□□ -1.58
SNCA-213ENST00000618500 ADCY7P51828 1080 aa5.15□□□□□ -1.58
SNCA-213ENST00000618500 ANTXR2P58335 489 aa5.15□□□□□ -1.58
SNCA-213ENST00000618500 HNRNPDQ14103 355 aaKnown RBP5.15□□□□□ -1.58
SNCA-213ENST00000618500 NPAS3Q8IXF0 933 aa5.15□□□□□ -1.58
SNCA-213ENST00000618500 AUTS2Q8WXX7 1259 aa5.15□□□□□ -1.58
SNCA-213ENST00000618500 SLC5A5Q92911 643 aa5.15□□□□□ -1.58
SNCA-213ENST00000618500 ADAM33Q9BZ11 813 aa5.15□□□□□ -1.58
SNCA-213ENST00000618500 AKT3Q9Y243 479 aa5.15□□□□□ -1.58
SNCA-213ENST00000618500 MTF2Q9Y483 593 aaPredicted RBP5.15□□□□□ -1.58
SNCA-213ENST00000618500 PCDHB2Q9Y5E7 798 aa5.15□□□□□ -1.58
SNCA-213ENST00000618500 PCDH15Q96QU1 1955 aa5.15□□□□□ -1.58
SNCA-213ENST00000618500 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.15□□□□□ -1.58
SNCA-213ENST00000618500 SRRM3A6NNA2 597 aaPredicted RBP5.15□□□□□ -1.58
SNCA-213ENST00000618500 H0Y626 953 aa5.15□□□□□ -1.58
SNCA-213ENST00000618500 IPO5O00410 1097 aaKnown RBP5.15□□□□□ -1.58
SNCA-213ENST00000618500 DKC1O60832 514 aaKnown RBP eCLIP5.15□□□□□ -1.58
SNCA-213ENST00000618500 TRIM16O95361 564 aa5.15□□□□□ -1.58
SNCA-213ENST00000618500 CEACAM1P13688 526 aa5.15□□□□□ -1.58
SNCA-213ENST00000618500 DNM2P50570 870 aa5.15□□□□□ -1.58
SNCA-213ENST00000618500 SP4Q02446 784 aa5.15□□□□□ -1.58
SNCA-213ENST00000618500 XKR3Q5GH77 459 aa5.15□□□□□ -1.58
SNCA-213ENST00000618500 STPG1Q5TH74 334 aa5.15□□□□□ -1.58
SNCA-213ENST00000618500 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.15□□□□□ -1.58
SNCA-213ENST00000618500 CACNA2D4Q7Z3S7 1137 aa5.15□□□□□ -1.58
SNCA-213ENST00000618500 HACE1Q8IYU2 909 aa5.15□□□□□ -1.58
SNCA-213ENST00000618500 FAM160A2Q8N612 972 aaPredicted RBP5.15□□□□□ -1.58
SNCA-213ENST00000618500 FGF13Q92913 245 aa5.15□□□□□ -1.58
SNCA-213ENST00000618500 OXCT2Q9BYC2 517 aaPredicted RBP5.15□□□□□ -1.58
SNCA-213ENST00000618500 BARHL2Q9NY43 387 aa5.15□□□□□ -1.58
SNCA-213ENST00000618500 EVLQ9UI08 416 aaPredicted RBP5.15□□□□□ -1.58
SNCA-213ENST00000618500 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.15□□□□□ -1.58
SNCA-213ENST00000618500 CFAP54Q96N23 3096 aa5.15□□□□□ -1.58
SNCA-213ENST00000618500 OTOGLQ3ZCN5 2332 aa5.15□□□□□ -1.59
SNCA-213ENST00000618500 CYP3A7-CYP3A51PA0A087WV96 503 aa5.15□□□□□ -1.59
SNCA-213ENST00000618500 ZNF197O14709 1029 aa5.15□□□□□ -1.59
SNCA-213ENST00000618500 BACH1O14867 736 aa5.15□□□□□ -1.59
SNCA-213ENST00000618500 CYP3A7P24462 503 aa5.15□□□□□ -1.59
SNCA-213ENST00000618500 CXCL12P48061 93 aa5.15□□□□□ -1.59
SNCA-213ENST00000618500 CLCN3P51790 818 aa5.15□□□□□ -1.59
SNCA-213ENST00000618500 PRKCEQ02156 737 aa5.15□□□□□ -1.59
SNCA-213ENST00000618500 RNASELQ05823 741 aaKnown RBP5.15□□□□□ -1.59
SNCA-213ENST00000618500 FUT2Q10981 343 aa5.15□□□□□ -1.59
SNCA-213ENST00000618500 SIM2Q14190 667 aaPredicted RBP5.15□□□□□ -1.59
SNCA-213ENST00000618500 UBXN2BQ14CS0 331 aa5.15□□□□□ -1.59
SNCA-213ENST00000618500 Q4G0T1 1027 aa5.15□□□□□ -1.59
SNCA-213ENST00000618500 SWSAP1Q6NVH7 229 aa5.15□□□□□ -1.59
SNCA-213ENST00000618500 FUT10Q6P4F1 479 aa5.15□□□□□ -1.59
SNCA-213ENST00000618500 SMC5Q8IY18 1101 aa5.15□□□□□ -1.59
SNCA-213ENST00000618500 FEZF2Q8TBJ5 459 aa5.15□□□□□ -1.59
SNCA-213ENST00000618500 IRF7Q92985 503 aa5.15□□□□□ -1.59
SNCA-213ENST00000618500 UROC1Q96N76 676 aa5.15□□□□□ -1.59
SNCA-213ENST00000618500 FAM193BQ96PV7 902 aaPredicted RBP5.15□□□□□ -1.59
SNCA-213ENST00000618500 GPR88Q9GZN0 384 aa5.15□□□□□ -1.59
SNCA-213ENST00000618500 PIDD1Q9HB75 910 aa5.15□□□□□ -1.59
SNCA-213ENST00000618500 DIAPH3Q9NSV4 1193 aa5.15□□□□□ -1.59
SNCA-213ENST00000618500 MTRRQ9UBK8 725 aa5.15□□□□□ -1.59
SNCA-213ENST00000618500 PCDHB15Q9Y5E8 787 aa5.15□□□□□ -1.59
SNCA-213ENST00000618500 E7EWF7 191 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 HRO43593 1189 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 SNW1Q13573 536 aaKnown RBP5.14□□□□□ -1.59
SNCA-213ENST00000618500 UBE2SQ16763 222 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 PPM1LQ5SGD2 360 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 PEAR1Q5VY43 1037 aaPredicted RBP5.14□□□□□ -1.59
SNCA-213ENST00000618500 PLA2G4DQ86XP0 818 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 KIAA1958Q8N8K9 716 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 SMG8Q8ND04 991 aaKnown RBP5.14□□□□□ -1.59
SNCA-213ENST00000618500 TCP11Q8WWU5 503 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 NLRP7Q8WX94 980 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 LENG9Q96B70 501 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 ZNF577Q9BSK1 485 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 IFT122Q9HBG6 1241 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 WDR70Q9NW82 654 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 ZMYM5Q9UJ78 669 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 ADAM28Q9UKQ2 775 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 MSRB2Q9Y3D2 182 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 FAM186AA6NE01 2351 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 ZFHX2Q9C0A1 2572 aaPredicted RBP5.14□□□□□ -1.59
SNCA-213ENST00000618500 TRIOO75962 3097 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 MYBPHLA2RUH7 354 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 NT5C1B-RDH14C9J2C7 533 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 FAM86B1E9PN63 330 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 LRRN2O75325 713 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 FGF19O95750 216 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 FAM86B2P0C5J1 330 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 FGFR3P22607 806 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 AASDHQ4L235 1098 aaPredicted RBP5.14□□□□□ -1.59
SNCA-213ENST00000618500 LIN9Q5TKA1 542 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms