RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 CCDC15Q0P6D6 951 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 KCNH2Q12809 1159 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 MAD2L2Q9UI95 211 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 SAMD9LQ8IVG5 1584 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 CACNA1FO60840 1977 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 GOLGA8TH3BQL2 631 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 BCAR1P56945 870 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 SEMA3FQ13275 785 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 ZFP42Q96MM3 310 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 ABHD10Q9NUJ1 306 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 GABBR1Q9UBS5 961 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 HERC5Q9UII4 1024 aaKnown RBP11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 FOXP2O15409 715 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 TADA2AO75478 443 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 GFAPP14136 432 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 KIRREL3Q8IZU9 778 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 OR6J1Q8NGC5 347 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 LXNQ9BS40 222 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 NRBP1Q9UHY1 535 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 NPM3O75607 178 aaKnown RBP11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 CHRNA3P32297 505 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 TPI1P60174 286 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 PSMC5P62195 406 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 TRIM60Q495X7 471 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 SPDYAQ5MJ70 313 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 SWSAP1Q6NVH7 229 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 DHX35Q9H5Z1 703 aaKnown RBP11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 RNF146Q9NTX7 359 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 COPG1Q9Y678 874 aaKnown RBP11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 HNRNPRO43390 633 aaKnown RBP11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 POLE2P56282 527 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 CASP8Q14790 479 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 SNX17Q15036 470 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 LRRC23Q53EV4 343 aaPredicted RBP11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 RGS9BPQ6ZS82 235 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 RHOT1Q8IXI2 618 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 PGBD3Q8N328 593 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 TIPINQ9BVW5 301 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 SLC13A1Q9BZW2 595 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 SIK2Q9H0K1 926 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 FAM217BQ9NTX9 383 aaPredicted RBP11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 RGL1Q9NZL6 768 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 OVOS2A0A0G2JMS6 1433 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 OVOS2A0A0J9YW53 1432 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 OVOS2Q6IE36 1432 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 SLC16A4O15374 487 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 KDM1AO60341 852 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 MFAP3LO75121 409 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 GPSM2P81274 684 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 TSPAN17Q96FV3 270 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 SPATA16Q9BXB7 569 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 ZNF556Q9HAH1 456 aa11.81□□□□□ -0.52
CCDC144B-208ENST00000618081 GRID2IPA4D2P6 1211 aa11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 A8MXQ7 604 aa11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 ADORA2BP29275 332 aa11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 ANKRD40Q6AI12 368 aa11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 MRGBPQ9NV56 204 aa11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 FAM32AQ9Y421 112 aaKnown RBP11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 COASYQ13057 564 aa11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 NBPF9Q3BBW0 867 aa11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 GPD1LQ8N335 351 aa11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 SRGAP2O75044 1071 aa11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 P4HBP07237 508 aaKnown RBP11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 HMOX2P30519 316 aa11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 NEK2P51955 445 aa11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 ANO5Q75V66 913 aa11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 OSBP2Q969R2 916 aa11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 NOP53Q9NZM5 478 aaKnown RBP11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 TSR3Q9UJK0 312 aaKnown RBP11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 LCP1P13796 627 aa11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 PGBD4Q96DM1 585 aa11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 KIF20BQ96Q89 1820 aa11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 DMC1Q14565 340 aa11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 COL15A1P39059 1388 aa11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 WDR19Q8NEZ3 1342 aa11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 RASSF10A6NK89 507 aa11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 PJA2O43164 708 aa11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 SEC31AO94979 1220 aaKnown RBP11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 PLEKHA8P1O95397 391 aa11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 KCNA2P16389 499 aa11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 PKP1Q13835 747 aa11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 CEP95Q96GE4 821 aa11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 HEMGNQ9BXL5 484 aa11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 UNC45AQ9H3U1 944 aa11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 NUMA1Q14980 2115 aa11.8□□□□□ -0.52
CCDC144B-208ENST00000618081 LGALS16A8MUM7 142 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 PRRG1O14668 218 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 CCDC22O60826 627 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 LTKP29376 864 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 HIF1AQ16665 826 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 ZNF555Q8NEP9 628 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 TTC7AQ9ULT0 858 aaPredicted RBP11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 TARSL2A2RTX5 802 aaKnown RBP11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 LRRIQ3A6PVS8 624 aaPredicted RBP11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 RCAN1P53805 252 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 PPM1NQ8N819 430 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 AGO2Q9UKV8 859 aaKnown RBP11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 IGSF1Q8N6C5 1336 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 PSMA3P25788 255 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms