RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 C9orf50Q5SZB4 431 aa17.07■□□□□ 0.32
PCDHGC3-204ENST00000617222 ARMCX5Q6P1M9 558 aa17.07■□□□□ 0.32
PCDHGC3-204ENST00000617222 THNSL1Q8IYQ7 743 aa17.07■□□□□ 0.32
PCDHGC3-204ENST00000617222 RNF169Q8NCN4 708 aa17.07■□□□□ 0.32
PCDHGC3-204ENST00000617222 SMG8Q8ND04 991 aaKnown RBP17.07■□□□□ 0.32
PCDHGC3-204ENST00000617222 CBWD1Q9BRT8 395 aa17.07■□□□□ 0.32
PCDHGC3-204ENST00000617222 MSTO1Q9BUK6 570 aa17.07■□□□□ 0.32
PCDHGC3-204ENST00000617222 RNF39Q9H2S5 420 aa17.07■□□□□ 0.32
PCDHGC3-204ENST00000617222 AGPAT3Q9NRZ7 376 aa17.07■□□□□ 0.32
PCDHGC3-204ENST00000617222 ANO10Q9NW15 660 aa17.07■□□□□ 0.32
PCDHGC3-204ENST00000617222 CXXC1Q9P0U4 656 aaPredicted RBP17.07■□□□□ 0.32
PCDHGC3-204ENST00000617222 HES2Q9Y543 173 aa17.07■□□□□ 0.32
PCDHGC3-204ENST00000617222 IPPQ9Y573 584 aa17.07■□□□□ 0.32
PCDHGC3-204ENST00000617222 LTBP2Q14767 1821 aa17.07■□□□□ 0.32
PCDHGC3-204ENST00000617222 CALUO43852 315 aaPredicted RBP17.06■□□□□ 0.32
PCDHGC3-204ENST00000617222 AMHP03971 560 aa17.06■□□□□ 0.32
PCDHGC3-204ENST00000617222 SKIP12755 728 aa17.06■□□□□ 0.32
PCDHGC3-204ENST00000617222 GARTP22102 1010 aa17.06■□□□□ 0.32
PCDHGC3-204ENST00000617222 CCNE1P24864 410 aa17.06■□□□□ 0.32
PCDHGC3-204ENST00000617222 OSTNP61366 133 aa17.06■□□□□ 0.32
PCDHGC3-204ENST00000617222 DEFB103AP81534 67 aa17.06■□□□□ 0.32
PCDHGC3-204ENST00000617222 CENPPQ6IPU0 288 aa17.06■□□□□ 0.32
PCDHGC3-204ENST00000617222 MRPL10Q7Z7H8 261 aaKnown RBP17.06■□□□□ 0.32
PCDHGC3-204ENST00000617222 GOLGA5Q8TBA6 731 aa17.06■□□□□ 0.32
PCDHGC3-204ENST00000617222 NELFBQ8WX92 580 aa17.06■□□□□ 0.32
PCDHGC3-204ENST00000617222 LPPQ93052 612 aa17.06■□□□□ 0.32
PCDHGC3-204ENST00000617222 P2RX5Q93086 422 aa17.06■□□□□ 0.32
PCDHGC3-204ENST00000617222 APOL6Q9BWW8 343 aa17.06■□□□□ 0.32
PCDHGC3-204ENST00000617222 GZF1Q9H116 711 aaPredicted RBP17.06■□□□□ 0.32
PCDHGC3-204ENST00000617222 MTIF3Q9H2K0 278 aaKnown RBP17.06■□□□□ 0.32
PCDHGC3-204ENST00000617222 NXF3Q9H4D5 531 aaKnown RBP17.06■□□□□ 0.32
PCDHGC3-204ENST00000617222 SNTG2Q9NY99 539 aa17.06■□□□□ 0.32
PCDHGC3-204ENST00000617222 CGNQ9P2M7 1197 aaKnown RBP17.06■□□□□ 0.32
PCDHGC3-204ENST00000617222 AGO2Q9UKV8 859 aaKnown RBP17.06■□□□□ 0.32
PCDHGC3-204ENST00000617222 LRFN2Q9ULH4 789 aa17.06■□□□□ 0.32
PCDHGC3-204ENST00000617222 CTNND2Q9UQB3 1225 aa17.06■□□□□ 0.32
PCDHGC3-204ENST00000617222 PCDHB7Q9Y5E2 793 aa17.06■□□□□ 0.32
PCDHGC3-204ENST00000617222 OGTO15294 1046 aa17.05■□□□□ 0.32
PCDHGC3-204ENST00000617222 UPP2O95045 317 aa17.05■□□□□ 0.32
PCDHGC3-204ENST00000617222 ITGA4P13612 1032 aa17.05■□□□□ 0.32
PCDHGC3-204ENST00000617222 PMS1P54277 932 aaKnown RBP17.05■□□□□ 0.32
PCDHGC3-204ENST00000617222 STX17P56962 302 aa17.05■□□□□ 0.32
PCDHGC3-204ENST00000617222 TYRO3Q06418 890 aa17.05■□□□□ 0.32
PCDHGC3-204ENST00000617222 STX1AQ16623 288 aa17.05■□□□□ 0.32
PCDHGC3-204ENST00000617222 SEZ6Q53EL9 994 aa17.05■□□□□ 0.32
PCDHGC3-204ENST00000617222 ANKRD40Q6AI12 368 aa17.05■□□□□ 0.32
PCDHGC3-204ENST00000617222 ZNF598Q86UK7 904 aaKnown RBP17.05■□□□□ 0.32
PCDHGC3-204ENST00000617222 CEP120Q8N960 986 aa17.05■□□□□ 0.32
PCDHGC3-204ENST00000617222 ZSWIM2Q8NEG5 633 aa17.05■□□□□ 0.32
PCDHGC3-204ENST00000617222 NOC3LQ8WTT2 800 aaKnown RBP17.05■□□□□ 0.32
PCDHGC3-204ENST00000617222 PGBD4Q96DM1 585 aa17.05■□□□□ 0.32
PCDHGC3-204ENST00000617222 TSG101Q99816 390 aa17.05■□□□□ 0.32
PCDHGC3-204ENST00000617222 HSPBP1Q9NZL4 362 aa17.05■□□□□ 0.32
PCDHGC3-204ENST00000617222 PARP2Q9UGN5 583 aa17.05■□□□□ 0.32
PCDHGC3-204ENST00000617222 DACH1Q9UI36 760 aa17.05■□□□□ 0.32
PCDHGC3-204ENST00000617222 TRAF3IP3Q9Y228 551 aa17.05■□□□□ 0.32
PCDHGC3-204ENST00000617222 SLC4A7Q9Y6M7 1214 aa17.05■□□□□ 0.32
PCDHGC3-204ENST00000617222 GOLGA8IPA6NC78 632 aa17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 TRIM49BA6NDI0 452 aa17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 GOLGA8JA6NMD2 632 aa17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 MEIS3P2A8K0S8 358 aa17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 EOMESO95936 686 aa17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 NR3C1P04150 777 aa17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 STAG3L1P0CL83 205 aa17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 ATF7P17544 494 aaPredicted RBP17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 AKAP5P24588 427 aa17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 BMP8BP34820 402 aa17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 GRM5P41594 1212 aa17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 ACOT2P49753 483 aa17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 CYP2J2P51589 502 aa17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 PAK1Q13153 545 aa17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 ZCWPW2Q504Y3 356 aa17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 ZBTB41Q5SVQ8 909 aa17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 RASIP1Q5U651 963 aa17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 FAM117BQ6P1L5 589 aa17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 AGMOQ6ZNB7 445 aa17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 TMCO2Q7Z6W1 182 aaPredicted RBP17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 NPAS4Q8IUM7 802 aa17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 C12orf56Q8IXR9 622 aa17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 TMEM192Q8IY95 271 aa17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 HACE1Q8IYU2 909 aa17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 TOP1MTQ969P6 601 aa17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 SAAL1Q96ER3 474 aa17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 RNPC3Q96LT9 517 aaKnown RBP17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 ACAP3Q96P50 834 aa17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 CCDC94Q9BW85 323 aaPredicted RBP17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 ELAC1Q9H777 363 aaKnown RBP17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 TMEM161AQ9NX61 479 aa17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 CEP290O15078 2479 aa17.04■□□□□ 0.32
PCDHGC3-204ENST00000617222 KIAA0391O15091 583 aaKnown RBP17.03■□□□□ 0.32
PCDHGC3-204ENST00000617222 EXTL3O43909 919 aa17.03■□□□□ 0.32
PCDHGC3-204ENST00000617222 LDHAP00338 332 aaKnown RBP17.03■□□□□ 0.32
PCDHGC3-204ENST00000617222 CCDC192P0DO97 292 aa17.03■□□□□ 0.32
PCDHGC3-204ENST00000617222 TNFSF9P41273 254 aa17.03■□□□□ 0.32
PCDHGC3-204ENST00000617222 ADAM9Q13443 819 aa17.03■□□□□ 0.32
PCDHGC3-204ENST00000617222 CHRDL2Q6WN34 429 aa17.03■□□□□ 0.32
PCDHGC3-204ENST00000617222 CRIPAKQ8N1N5 446 aa17.03■□□□□ 0.32
PCDHGC3-204ENST00000617222 XXYLT1Q8NBI6 393 aa17.03■□□□□ 0.32
PCDHGC3-204ENST00000617222 FAM213AQ9BRX8 229 aa17.03■□□□□ 0.32
PCDHGC3-204ENST00000617222 FUCA2Q9BTY2 467 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms