RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 USP17L20D6RJB6 530 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 PIK3R2O00459 728 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 NMT2O60551 498 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 UCHL3P15374 230 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 SCP2P22307 547 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 DAB2P98082 770 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 USP17L24Q0WX57 530 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 USP17L6PQ6QN14 398 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 TMEM260Q9NX78 707 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 CDHR2Q9BYE9 1310 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 CEP170Q5SW79 1584 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 MAP4P27816 1152 aaKnown RBP11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 GNA15P30679 374 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 JAK3P52333 1124 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 FLOT2Q14254 428 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 ERFEQ4G0M1 354 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 HEATR6Q6AI08 1181 aaKnown RBP11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 LRRC8EQ6NSJ5 796 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 POTEAQ6S8J7 498 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 PSPC1Q8WXF1 523 aaKnown RBP11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 PBXIP1Q96AQ6 731 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 ASCC2Q9H1I8 757 aaPredicted RBP11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 DCP1AQ9NPI6 582 aaPredicted RBP11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 SATB2Q9UPW6 733 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 EMSYQ7Z589 1322 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 SLC4A1P02730 911 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 TMED10P49755 219 aaKnown RBP11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 MRPS15P82914 257 aaKnown RBP11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 STX3Q13277 289 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 FAM98CQ17RN3 349 aaKnown RBP11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 RIBC1Q8N443 379 aaPredicted RBP11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 DCAF4Q8WV16 495 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 SLC5A4Q9NY91 659 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 FAM8A1Q9UBU6 413 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 MAGEA13PA6NCF6 341 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 H0Y626 953 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 BBOX1O75936 387 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 TRIM16O95361 564 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 ANP32DO95626 131 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 SDC4P31431 198 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 USP11P51784 963 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 SLC29A2Q14542 456 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 HABP4Q5JVS0 413 aaKnown RBP11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 OLFML2BQ68BL8 750 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 USP49Q70CQ1 688 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 ANKMY2Q8IV38 441 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 GIMAP8Q8ND71 665 aaPredicted RBP11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 TTC8Q8TAM2 541 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 ACAP3Q96P50 834 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 FAM213AQ9BRX8 229 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 ERBB3P21860 1342 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 PDS5AQ29RF7 1337 aaKnown RBP11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 UBAP1LF5GYI3 381 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 H3BQF6 201 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 SLC16A4O15374 487 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 SLC16A3O15427 465 aaKnown RBP11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 CLDN3O15551 220 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 KLHL2O95198 593 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 TDP2O95551 362 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 NQO1P15559 274 aaKnown RBP11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 EIF2AK2P19525 551 aaKnown RBP11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 SCTRP47872 440 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 STK4Q13043 487 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 ITIH4Q14624 930 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 KPNB1Q14974 876 aaKnown RBP11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 KYNUQ16719 465 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 BARGINQ6ZT62 677 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 COL23A1Q86Y22 540 aaPredicted RBP11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 FOXP4Q8IVH2 680 aaPredicted RBP11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 CDKL3Q8IVW4 592 aaPredicted RBP11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 LRRC34Q8IZ02 419 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 USP6NLQ92738 828 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 EME1Q96AY2 570 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 PHF20Q9BVI0 1012 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 PARVAQ9NVD7 372 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 FNDC3AQ9Y2H6 1198 aaKnown RBP11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 WDR17Q8IZU2 1322 aa11.27□□□□□ -0.6
CLTCL1-209ENST00000617103 MROH7-TTC4A0A0A0MT08 1334 aa11.27□□□□□ -0.61
CLTCL1-209ENST00000617103 UBTFL6P0CB48 400 aaPredicted RBP11.27□□□□□ -0.61
CLTCL1-209ENST00000617103 PSMD7P51665 324 aa11.27□□□□□ -0.61
CLTCL1-209ENST00000617103 TAP1Q03518 808 aa11.27□□□□□ -0.61
CLTCL1-209ENST00000617103 POU5F1BQ06416 359 aa11.27□□□□□ -0.61
CLTCL1-209ENST00000617103 P3H1Q32P28 736 aa11.27□□□□□ -0.61
CLTCL1-209ENST00000617103 MDM1Q8TC05 714 aa11.27□□□□□ -0.61
CLTCL1-209ENST00000617103 NSL1Q96IY1 281 aa11.27□□□□□ -0.61
CLTCL1-209ENST00000617103 FUCA2Q9BTY2 467 aa11.27□□□□□ -0.61
CLTCL1-209ENST00000617103 PRR36Q9H6K5 1346 aa11.27□□□□□ -0.61
CLTCL1-209ENST00000617103 E7ENQ6 273 aa11.27□□□□□ -0.61
CLTCL1-209ENST00000617103 KLRC1P26715 233 aa11.27□□□□□ -0.61
CLTCL1-209ENST00000617103 GRM1Q13255 1194 aa11.27□□□□□ -0.61
CLTCL1-209ENST00000617103 RBM43Q6ZSC3 357 aaKnown RBP11.27□□□□□ -0.61
CLTCL1-209ENST00000617103 THNSL1Q8IYQ7 743 aa11.27□□□□□ -0.61
CLTCL1-209ENST00000617103 HPS3Q969F9 1004 aa11.27□□□□□ -0.61
CLTCL1-209ENST00000617103 ERGIC2Q96RQ1 377 aa11.27□□□□□ -0.61
CLTCL1-209ENST00000617103 NDUFA13Q9P0J0 144 aa11.27□□□□□ -0.61
CLTCL1-209ENST00000617103 NEU2Q9Y3R4 380 aa11.27□□□□□ -0.61
CLTCL1-209ENST00000617103 ADCY3O60266 1144 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 PRLRP16471 622 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 ZNF699Q32M78 642 aa11.26□□□□□ -0.61
CLTCL1-209ENST00000617103 MDH1BQ5I0G3 518 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms