RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 CRELD2Q6UXH1 353 aaPredicted RBP16.55■□□□□ 0.24
CBWD1-225ENST00000616944 ANKRD33Q7Z3H0 272 aa16.55■□□□□ 0.24
CBWD1-225ENST00000616944 CBWD2Q8IUF1 395 aa16.55■□□□□ 0.24
CBWD1-225ENST00000616944 SLC35C1Q96A29 364 aa16.55■□□□□ 0.24
CBWD1-225ENST00000616944 VPS16Q9H269 839 aa16.55■□□□□ 0.24
CBWD1-225ENST00000616944 AGPAT5Q9NUQ2 364 aa16.55■□□□□ 0.24
CBWD1-225ENST00000616944 ALPK3Q96L96 1907 aa16.54■□□□□ 0.24
CBWD1-225ENST00000616944 GOLGA8IPA6NC78 632 aa16.54■□□□□ 0.24
CBWD1-225ENST00000616944 GOLGA8JA6NMD2 632 aa16.54■□□□□ 0.24
CBWD1-225ENST00000616944 N4BP3O15049 544 aa16.54■□□□□ 0.24
CBWD1-225ENST00000616944 TEX33O43247 280 aa16.54■□□□□ 0.24
CBWD1-225ENST00000616944 EXTL3O43909 919 aa16.54■□□□□ 0.24
CBWD1-225ENST00000616944 CTSHP09668 335 aa16.54■□□□□ 0.24
CBWD1-225ENST00000616944 PRKCSHP14314 528 aaPredicted RBP16.54■□□□□ 0.24
CBWD1-225ENST00000616944 CAPN2P17655 700 aa16.54■□□□□ 0.24
CBWD1-225ENST00000616944 BFSP1Q12934 665 aa16.54■□□□□ 0.24
CBWD1-225ENST00000616944 SCN5AQ14524 2016 aa16.54■□□□□ 0.24
CBWD1-225ENST00000616944 SLC39A5Q6ZMH5 540 aa16.54■□□□□ 0.24
CBWD1-225ENST00000616944 INTS8Q75QN2 995 aaKnown RBP16.54■□□□□ 0.24
CBWD1-225ENST00000616944 CATSPER4Q7RTX7 472 aa16.54■□□□□ 0.24
CBWD1-225ENST00000616944 FAM228AQ86W67 206 aa16.54■□□□□ 0.24
CBWD1-225ENST00000616944 CREBRFQ8IUR6 639 aa16.54■□□□□ 0.24
CBWD1-225ENST00000616944 CPB2Q96IY4 423 aa16.54■□□□□ 0.24
CBWD1-225ENST00000616944 MFSD14AQ96MC6 490 aa16.54■□□□□ 0.24
CBWD1-225ENST00000616944 MSTO1Q9BUK6 570 aa16.54■□□□□ 0.24
CBWD1-225ENST00000616944 NOC4LQ9BVI4 516 aaKnown RBP16.54■□□□□ 0.24
CBWD1-225ENST00000616944 CDT1Q9H211 546 aa16.54■□□□□ 0.24
CBWD1-225ENST00000616944 MROH7Q68CQ1 1323 aa16.53■□□□□ 0.24
CBWD1-225ENST00000616944 TET1Q8NFU7 2136 aa16.53■□□□□ 0.24
CBWD1-225ENST00000616944 OGTO15294 1046 aa16.53■□□□□ 0.24
CBWD1-225ENST00000616944 LDHAP00338 332 aaKnown RBP16.53■□□□□ 0.24
CBWD1-225ENST00000616944 CKBP12277 381 aa16.53■□□□□ 0.24
CBWD1-225ENST00000616944 PPP2R3AQ06190 1150 aa16.53■□□□□ 0.24
CBWD1-225ENST00000616944 ZNF568Q3ZCX4 644 aa16.53■□□□□ 0.24
CBWD1-225ENST00000616944 VWA3BQ502W6 1294 aa16.53■□□□□ 0.24
CBWD1-225ENST00000616944 ZBTB41Q5SVQ8 909 aa16.53■□□□□ 0.24
CBWD1-225ENST00000616944 ZNF618Q5T7W0 954 aa16.53■□□□□ 0.24
CBWD1-225ENST00000616944 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.53■□□□□ 0.24
CBWD1-225ENST00000616944 CDR2LQ86X02 465 aaPredicted RBP16.53■□□□□ 0.24
CBWD1-225ENST00000616944 RDH13Q8NBN7 331 aa16.53■□□□□ 0.24
CBWD1-225ENST00000616944 PLEKHO2Q8TD55 490 aa16.53■□□□□ 0.24
CBWD1-225ENST00000616944 ANP32BQ92688 251 aaKnown RBP16.53■□□□□ 0.24
CBWD1-225ENST00000616944 OSBPL7Q9BZF2 842 aa16.53■□□□□ 0.24
CBWD1-225ENST00000616944 NDST4Q9H3R1 872 aa16.53■□□□□ 0.24
CBWD1-225ENST00000616944 KIAA1586Q9HCI6 787 aa16.53■□□□□ 0.24
CBWD1-225ENST00000616944 NOC2LQ9Y3T9 749 aaKnown RBP16.53■□□□□ 0.24
CBWD1-225ENST00000616944 MCF2P10911 925 aa16.52■□□□□ 0.24
CBWD1-225ENST00000616944 AXLP30530 894 aa16.52■□□□□ 0.24
CBWD1-225ENST00000616944 ENPEPQ07075 957 aa16.52■□□□□ 0.24
CBWD1-225ENST00000616944 CYP24A1Q07973 514 aa16.52■□□□□ 0.24
CBWD1-225ENST00000616944 FILIP1LQ4L180 1135 aa16.52■□□□□ 0.24
CBWD1-225ENST00000616944 FBXO47Q5MNV8 452 aa16.52■□□□□ 0.24
CBWD1-225ENST00000616944 C1orf220Q5T0J3 134 aa16.52■□□□□ 0.24
CBWD1-225ENST00000616944 CAGE1Q8TC20 777 aa16.52■□□□□ 0.24
CBWD1-225ENST00000616944 PPP1R9BQ96SB3 815 aa16.52■□□□□ 0.24
CBWD1-225ENST00000616944 FAM213AQ9BRX8 229 aa16.52■□□□□ 0.24
CBWD1-225ENST00000616944 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.52■□□□□ 0.24
CBWD1-225ENST00000616944 SQORQ9Y6N5 450 aa16.52■□□□□ 0.24
CBWD1-225ENST00000616944 RBAK-RBAKDNI3L0D1 243 aa16.52■□□□□ 0.23
CBWD1-225ENST00000616944 TPM3P06753 285 aa16.52■□□□□ 0.23
CBWD1-225ENST00000616944 ACOT2P49753 483 aa16.52■□□□□ 0.23
CBWD1-225ENST00000616944 NOTUMQ6P988 496 aa16.52■□□□□ 0.23
CBWD1-225ENST00000616944 ZBTB33Q86T24 672 aa16.52■□□□□ 0.23
CBWD1-225ENST00000616944 VSTM4Q8IW00 320 aa16.52■□□□□ 0.23
CBWD1-225ENST00000616944 PARD3BQ8TEW8 1205 aa16.52■□□□□ 0.23
CBWD1-225ENST00000616944 TOX2Q96NM4 488 aa16.52■□□□□ 0.23
CBWD1-225ENST00000616944 TCHPQ9BT92 498 aa16.52■□□□□ 0.23
CBWD1-225ENST00000616944 AGO3Q9H9G7 860 aaKnown RBP16.52■□□□□ 0.23
CBWD1-225ENST00000616944 CPSF3Q9UKF6 684 aaKnown RBP16.52■□□□□ 0.23
CBWD1-225ENST00000616944 ZNF233A6NK53 670 aa16.51■□□□□ 0.23
CBWD1-225ENST00000616944 RPS6KA5O75582 802 aa16.51■□□□□ 0.23
CBWD1-225ENST00000616944 TNFSF9P41273 254 aa16.51■□□□□ 0.23
CBWD1-225ENST00000616944 MATR3P43243 847 aaKnown RBP eCLIP16.51■□□□□ 0.23
CBWD1-225ENST00000616944 VAMP7P51809 220 aa16.51■□□□□ 0.23
CBWD1-225ENST00000616944 ATN1P54259 1190 aaPredicted RBP16.51■□□□□ 0.23
CBWD1-225ENST00000616944 WNT7BP56706 349 aa16.51■□□□□ 0.23
CBWD1-225ENST00000616944 DLG4P78352 724 aa16.51■□□□□ 0.23
CBWD1-225ENST00000616944 CLDN10P78369 228 aa16.51■□□□□ 0.23
CBWD1-225ENST00000616944 CCDC173Q0VFZ6 552 aa16.51■□□□□ 0.23
CBWD1-225ENST00000616944 KCNH2Q12809 1159 aa16.51■□□□□ 0.23
CBWD1-225ENST00000616944 HSP90AA2PQ14568 343 aaPredicted RBP16.51■□□□□ 0.23
CBWD1-225ENST00000616944 LPIN1Q14693 890 aa16.51■□□□□ 0.23
CBWD1-225ENST00000616944 MBTPS1Q14703 1052 aa16.51■□□□□ 0.23
CBWD1-225ENST00000616944 SLC27A1Q6PCB7 646 aa16.51■□□□□ 0.23
CBWD1-225ENST00000616944 CEP120Q8N960 986 aa16.51■□□□□ 0.23
CBWD1-225ENST00000616944 TMC2Q8TDI7 906 aa16.51■□□□□ 0.23
CBWD1-225ENST00000616944 ERGIC2Q96RQ1 377 aa16.51■□□□□ 0.23
CBWD1-225ENST00000616944 TMEM106CQ9BVX2 250 aa16.51■□□□□ 0.23
CBWD1-225ENST00000616944 A0A1W2PQC6 194 aa16.5■□□□□ 0.23
CBWD1-225ENST00000616944 PITPNM1O00562 1244 aa16.5■□□□□ 0.23
CBWD1-225ENST00000616944 PQBP1O60828 265 aaKnown RBP16.5■□□□□ 0.23
CBWD1-225ENST00000616944 TPM2P07951 284 aa16.5■□□□□ 0.23
CBWD1-225ENST00000616944 TRIM49P0CI25 452 aa16.5■□□□□ 0.23
CBWD1-225ENST00000616944 TRIM49CP0CI26 452 aa16.5■□□□□ 0.23
CBWD1-225ENST00000616944 HARSP12081 509 aaKnown RBP16.5■□□□□ 0.23
CBWD1-225ENST00000616944 UBXN1Q04323 297 aa16.5■□□□□ 0.23
CBWD1-225ENST00000616944 PTPN21Q16825 1174 aa16.5■□□□□ 0.23
CBWD1-225ENST00000616944 TMEM132AQ24JP5 1023 aa16.5■□□□□ 0.23
CBWD1-225ENST00000616944 SEZ6Q53EL9 994 aa16.5■□□□□ 0.23
CBWD1-225ENST00000616944 DCAF17Q5H9S7 520 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms