RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 SLC39A14Q15043 492 aa24.39■■□□□ 1.49
CBWD3-212ENST00000616550 SPECC1Q5M775 1068 aa24.39■■□□□ 1.49
CBWD3-212ENST00000616550 NT5DC1Q5TFE4 455 aa24.39■■□□□ 1.49
CBWD3-212ENST00000616550 GPBP1Q86WP2 473 aa24.39■■□□□ 1.49
CBWD3-212ENST00000616550 EPSTI1Q96J88 318 aa24.39■■□□□ 1.49
CBWD3-212ENST00000616550 RPS6KC1Q96S38 1066 aa24.39■■□□□ 1.49
CBWD3-212ENST00000616550 NTPCRQ9BSD7 190 aaKnown RBP24.39■■□□□ 1.49
CBWD3-212ENST00000616550 KLK14Q9P0G3 267 aa24.39■■□□□ 1.49
CBWD3-212ENST00000616550 CCDC39Q9UFE4 941 aa24.39■■□□□ 1.49
CBWD3-212ENST00000616550 FAM50BQ9Y247 325 aa24.39■■□□□ 1.49
CBWD3-212ENST00000616550 NRP1O14786 923 aa24.38■■□□□ 1.49
CBWD3-212ENST00000616550 SLC16A4O15374 487 aa24.38■■□□□ 1.49
CBWD3-212ENST00000616550 B4GALT3O60512 393 aa24.38■■□□□ 1.49
CBWD3-212ENST00000616550 NR1I2O75469 434 aa24.38■■□□□ 1.49
CBWD3-212ENST00000616550 EDN1P05305 212 aa24.38■■□□□ 1.49
CBWD3-212ENST00000616550 CA8P35219 290 aa24.38■■□□□ 1.49
CBWD3-212ENST00000616550 TXLNAP40222 546 aa24.38■■□□□ 1.49
CBWD3-212ENST00000616550 DLX2Q07687 328 aaPredicted RBP24.38■■□□□ 1.49
CBWD3-212ENST00000616550 MCM6Q14566 821 aa24.38■■□□□ 1.49
CBWD3-212ENST00000616550 DUSP6Q16828 381 aa24.38■■□□□ 1.49
CBWD3-212ENST00000616550 DCAF4L1Q3SXM0 396 aa24.38■■□□□ 1.49
CBWD3-212ENST00000616550 ARSHQ5FYA8 562 aa24.38■■□□□ 1.49
CBWD3-212ENST00000616550 EEF1DP3Q658K8 133 aa24.38■■□□□ 1.49
CBWD3-212ENST00000616550 COLGALT2Q8IYK4 626 aa24.38■■□□□ 1.49
CBWD3-212ENST00000616550 MRPL43Q8N983 215 aaKnown RBP24.38■■□□□ 1.49
CBWD3-212ENST00000616550 SPIRE2Q8WWL2 714 aa24.38■■□□□ 1.49
CBWD3-212ENST00000616550 RAD54LQ92698 747 aa24.38■■□□□ 1.49
CBWD3-212ENST00000616550 ZNF396Q96N95 335 aaPredicted RBP24.38■■□□□ 1.49
CBWD3-212ENST00000616550 CLIC6Q96NY7 704 aa24.38■■□□□ 1.49
CBWD3-212ENST00000616550 MRPL4Q9BYD3 311 aaKnown RBP24.38■■□□□ 1.49
CBWD3-212ENST00000616550 BLOC1S4Q9NUP1 217 aa24.38■■□□□ 1.49
CBWD3-212ENST00000616550 SNTG2Q9NY99 539 aa24.38■■□□□ 1.49
CBWD3-212ENST00000616550 LARSQ9P2J5 1176 aaKnown RBP24.38■■□□□ 1.49
CBWD3-212ENST00000616550 STK39Q9UEW8 545 aa24.38■■□□□ 1.49
CBWD3-212ENST00000616550 ZMYM2Q9UBW7 1377 aa24.38■■□□□ 1.49
CBWD3-212ENST00000616550 NPHP3-ACAD11A0A0J9YXS1 232 aa24.37■■□□□ 1.49
CBWD3-212ENST00000616550 GRXCR2A6NFK2 248 aa24.37■■□□□ 1.49
CBWD3-212ENST00000616550 HIDE1A8MVS5 230 aa24.37■■□□□ 1.49
CBWD3-212ENST00000616550 CXCL14O95715 111 aa24.37■■□□□ 1.49
CBWD3-212ENST00000616550 OR1G1P47890 313 aa24.37■■□□□ 1.49
CBWD3-212ENST00000616550 STRN3Q13033 797 aa24.37■■□□□ 1.49
CBWD3-212ENST00000616550 SPRYD3Q8NCJ5 442 aa24.37■■□□□ 1.49
CBWD3-212ENST00000616550 NECAB3Q96P71 396 aaPredicted RBP24.37■■□□□ 1.49
CBWD3-212ENST00000616550 ODF2LQ9ULJ1 636 aa24.37■■□□□ 1.49
CBWD3-212ENST00000616550 TNFSF13BQ9Y275 285 aa24.37■■□□□ 1.49
CBWD3-212ENST00000616550 MORC2Q9Y6X9 1032 aaPredicted RBP24.37■■□□□ 1.49
CBWD3-212ENST00000616550 XIRP2A4UGR9 3374 aa24.37■■□□□ 1.49
CBWD3-212ENST00000616550 TNFRSF10AO00220 468 aa24.36■■□□□ 1.49
CBWD3-212ENST00000616550 TBX10O75333 385 aa24.36■■□□□ 1.49
CBWD3-212ENST00000616550 KRT18P05783 430 aaKnown RBP24.36■■□□□ 1.49
CBWD3-212ENST00000616550 DDIT3P35638 169 aa24.36■■□□□ 1.49
CBWD3-212ENST00000616550 CACNB1Q02641 598 aaPredicted RBP24.36■■□□□ 1.49
CBWD3-212ENST00000616550 DSC1Q08554 894 aa24.36■■□□□ 1.49
CBWD3-212ENST00000616550 GRIK3Q13003 919 aa24.36■■□□□ 1.49
CBWD3-212ENST00000616550 STK38Q15208 465 aa24.36■■□□□ 1.49
CBWD3-212ENST00000616550 CLUL1Q15846 466 aa24.36■■□□□ 1.49
CBWD3-212ENST00000616550 FOXD4L5Q5VV16 416 aaPredicted RBP24.36■■□□□ 1.49
CBWD3-212ENST00000616550 USP49Q70CQ1 688 aa24.36■■□□□ 1.49
CBWD3-212ENST00000616550 KRI1Q8N9T8 703 aaKnown RBP24.36■■□□□ 1.49
CBWD3-212ENST00000616550 TMEM87AQ8NBN3 555 aa24.36■■□□□ 1.49
CBWD3-212ENST00000616550 GSTCDQ8NEC7 633 aa24.36■■□□□ 1.49
CBWD3-212ENST00000616550 BCL7CQ8WUZ0 217 aaPredicted RBP24.36■■□□□ 1.49
CBWD3-212ENST00000616550 FOXD4L4Q8WXT5 416 aaPredicted RBP24.36■■□□□ 1.49
CBWD3-212ENST00000616550 LARP4BQ92615 738 aaKnown RBP24.36■■□□□ 1.49
CBWD3-212ENST00000616550 ACO2Q99798 780 aaKnown RBP24.36■■□□□ 1.49
CBWD3-212ENST00000616550 CD207Q9UJ71 328 aa24.36■■□□□ 1.49
CBWD3-212ENST00000616550 VCANP13611 3396 aa24.36■■□□□ 1.49
CBWD3-212ENST00000616550 MYH15Q9Y2K3 1946 aa24.35■■□□□ 1.49
CBWD3-212ENST00000616550 C2orf71A6NGG8 1288 aa24.35■■□□□ 1.49
CBWD3-212ENST00000616550 H0YCG3 227 aa24.35■■□□□ 1.49
CBWD3-212ENST00000616550 RECQL4O94761 1208 aa24.35■■□□□ 1.49
CBWD3-212ENST00000616550 SRGAP2BP0DMP2 458 aa24.35■■□□□ 1.49
CBWD3-212ENST00000616550 NASPP49321 788 aaPredicted RBP24.35■■□□□ 1.49
CBWD3-212ENST00000616550 GIT2Q14161 759 aa24.35■■□□□ 1.49
CBWD3-212ENST00000616550 TAS1R3Q7RTX0 852 aa24.35■■□□□ 1.49
CBWD3-212ENST00000616550 LRRC15Q8TF66 581 aa24.35■■□□□ 1.49
CBWD3-212ENST00000616550 REEP2Q9BRK0 252 aa24.35■■□□□ 1.49
CBWD3-212ENST00000616550 TARS2Q9BW92 718 aaKnown RBP24.35■■□□□ 1.49
CBWD3-212ENST00000616550 ZBP1Q9H171 429 aa24.35■■□□□ 1.49
CBWD3-212ENST00000616550 TFIP11Q9UBB9 837 aaKnown RBP24.35■■□□□ 1.49
CBWD3-212ENST00000616550 GDAQ9Y2T3 454 aa24.35■■□□□ 1.49
CBWD3-212ENST00000616550 PRG3Q9Y2Y8 225 aaPredicted RBP24.35■■□□□ 1.49
CBWD3-212ENST00000616550 FAM13AO94988 1023 aa24.34■■□□□ 1.49
CBWD3-212ENST00000616550 ZSCAN22P10073 491 aaPredicted RBP24.34■■□□□ 1.49
CBWD3-212ENST00000616550 CTSAP10619 480 aa24.34■■□□□ 1.49
CBWD3-212ENST00000616550 IL9P15248 144 aa24.34■■□□□ 1.49
CBWD3-212ENST00000616550 RRAGBQ5VZM2 374 aa24.34■■□□□ 1.49
CBWD3-212ENST00000616550 MYCT1Q8N699 235 aa24.34■■□□□ 1.49
CBWD3-212ENST00000616550 TMEM161BQ8NDZ6 487 aa24.34■■□□□ 1.49
CBWD3-212ENST00000616550 TCHPQ9BT92 498 aa24.34■■□□□ 1.49
CBWD3-212ENST00000616550 COLEC11Q9BWP8 271 aa24.34■■□□□ 1.49
CBWD3-212ENST00000616550 CLEC1BQ9P126 229 aa24.34■■□□□ 1.49
CBWD3-212ENST00000616550 STK17AQ9UEE5 414 aa24.34■■□□□ 1.49
CBWD3-212ENST00000616550 BARX2Q9UMQ3 279 aaPredicted RBP24.34■■□□□ 1.49
CBWD3-212ENST00000616550 CUL9Q8IWT3 2517 aa24.34■■□□□ 1.49
CBWD3-212ENST00000616550 GLP2RO95838 553 aa24.33■■□□□ 1.49
CBWD3-212ENST00000616550 MAPTP10636 758 aaKnown RBP24.33■■□□□ 1.49
CBWD3-212ENST00000616550 SMAD4Q13485 552 aaKnown RBP24.33■■□□□ 1.49
CBWD3-212ENST00000616550 ZNF568Q3ZCX4 644 aa24.33■■□□□ 1.49
CBWD3-212ENST00000616550 LINC00301Q8NCQ3 95 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms