RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 FAM49AQ9H0Q0 323 aaPredicted RBP6.82□□□□□ -1.32
CBWD3-210ENST00000614398 TRPV6Q9H1D0 765 aa6.82□□□□□ -1.32
CBWD3-210ENST00000614398 USP20Q9Y2K6 914 aa6.82□□□□□ -1.32
CBWD3-210ENST00000614398 R3HCC1Q9Y3T6 440 aaKnown RBP6.82□□□□□ -1.32
CBWD3-210ENST00000614398 CCDC66A2RUB6 948 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 TRIM49BA6NDI0 452 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 ANKRD63C9JTQ0 380 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 HNRNPDLO14979 420 aaKnown RBP6.81□□□□□ -1.32
CBWD3-210ENST00000614398 GPR182O15218 404 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 OGTO15294 1046 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 IQCF3P0C7M6 154 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 NR2F2P24468 414 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 HOXA11P31270 313 aaPredicted RBP6.81□□□□□ -1.32
CBWD3-210ENST00000614398 GTF2H1P32780 548 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 PSMC2P35998 433 aaKnown RBP6.81□□□□□ -1.32
CBWD3-210ENST00000614398 GABPB1Q06547 395 aaPredicted RBP6.81□□□□□ -1.32
CBWD3-210ENST00000614398 NCBP1Q09161 790 aaKnown RBP6.81□□□□□ -1.32
CBWD3-210ENST00000614398 FAAP100Q0VG06 881 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 NOLC1Q14978 699 aaKnown RBP eCLIP6.81□□□□□ -1.32
CBWD3-210ENST00000614398 SURF1Q15526 300 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 TCP11X2Q5H9J9 407 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 KLHL10Q6JEL2 608 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 NOTUMQ6P988 496 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 LUZP1Q86V48 1076 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 FAM228AQ86W67 206 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 CD302Q8IX05 232 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 NELFCDQ8IXH7 590 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 GPD1LQ8N335 351 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 VTI1AQ96AJ9 217 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 ZBTB10Q96DT7 871 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 HSPBP1Q9NZL4 362 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 NOD1Q9Y239 953 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 INO80B-WBP1J3KQ70 363 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 TULP2O00295 520 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 P4HA2O15460 535 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 STX10O60499 249 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 ZNF623O75123 536 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 IL18RAPO95256 599 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 EPB41P11171 864 aaKnown RBP6.81□□□□□ -1.32
CBWD3-210ENST00000614398 SKIP12755 728 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 ARF4P18085 180 aaPredicted RBP6.81□□□□□ -1.32
CBWD3-210ENST00000614398 CDC25BP30305 580 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 GTF2F1P35269 517 aaKnown RBP eCLIP6.81□□□□□ -1.32
CBWD3-210ENST00000614398 THPOP40225 353 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 GRM5P41594 1212 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 RAB27AP51159 221 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 AP3M2P53677 418 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 ADAM9Q13443 819 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 LPIN1Q14693 890 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 PSMD6Q15008 389 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 KIZQ2M2Z5 673 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 XKR4Q5GH76 650 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 ARMCX5Q6P1M9 558 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 SLC27A1Q6PCB7 646 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 INTS8Q75QN2 995 aaKnown RBP6.81□□□□□ -1.32
CBWD3-210ENST00000614398 LRRC8DQ7L1W4 858 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 TRMT1LQ7Z2T5 733 aaKnown RBP6.81□□□□□ -1.32
CBWD3-210ENST00000614398 MRPL10Q7Z7H8 261 aaKnown RBP6.81□□□□□ -1.32
CBWD3-210ENST00000614398 NT5DC4Q86YG4 428 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 BRSK2Q8IWQ3 736 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 ANKRD20A12PQ8NF67 263 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 DIS3LQ8TF46 1054 aaKnown RBP6.81□□□□□ -1.32
CBWD3-210ENST00000614398 OSMRQ99650 979 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 TARS2Q9BW92 718 aaKnown RBP6.81□□□□□ -1.32
CBWD3-210ENST00000614398 SRRTQ9BXP5 876 aaKnown RBP6.81□□□□□ -1.32
CBWD3-210ENST00000614398 FTHL17Q9BXU8 183 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 CDHR5Q9HBB8 845 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 POLD4Q9HCU8 107 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 FANCLQ9NW38 375 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 CPSF3Q9UKF6 684 aaKnown RBP6.81□□□□□ -1.32
CBWD3-210ENST00000614398 MAPK8IP1Q9UQF2 711 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 DERAQ9Y315 318 aa6.81□□□□□ -1.32
CBWD3-210ENST00000614398 A0A1B0GTH6 734 aa6.8□□□□□ -1.32
CBWD3-210ENST00000614398 GTPBP10A4D1E9 387 aaKnown RBP6.8□□□□□ -1.32
CBWD3-210ENST00000614398 KCNJ18B7U540 433 aa6.8□□□□□ -1.32
CBWD3-210ENST00000614398 CBFA2T2O43439 604 aa6.8□□□□□ -1.32
CBWD3-210ENST00000614398 ERLIN2O94905 339 aa6.8□□□□□ -1.32
CBWD3-210ENST00000614398 PFKMP08237 780 aa6.8□□□□□ -1.32
CBWD3-210ENST00000614398 CLTBP09497 229 aa6.8□□□□□ -1.32
CBWD3-210ENST00000614398 TLE2Q04725 743 aa6.8□□□□□ -1.32
CBWD3-210ENST00000614398 KCNJ12Q14500 433 aa6.8□□□□□ -1.32
CBWD3-210ENST00000614398 MAN2A1Q16706 1144 aa6.8□□□□□ -1.32
CBWD3-210ENST00000614398 TRIM60Q495X7 471 aa6.8□□□□□ -1.32
CBWD3-210ENST00000614398 UBXN11Q5T124 520 aa6.8□□□□□ -1.32
CBWD3-210ENST00000614398 ZNF618Q5T7W0 954 aa6.8□□□□□ -1.32
CBWD3-210ENST00000614398 CATSPER4Q7RTX7 472 aa6.8□□□□□ -1.32
CBWD3-210ENST00000614398 USP37Q86T82 979 aa6.8□□□□□ -1.32
CBWD3-210ENST00000614398 TMEM40Q8WWA1 233 aa6.8□□□□□ -1.32
CBWD3-210ENST00000614398 IQCDQ96DY2 449 aa6.8□□□□□ -1.32
CBWD3-210ENST00000614398 MRFAP1L1Q96HT8 127 aa6.8□□□□□ -1.32
CBWD3-210ENST00000614398 CNOT6LQ96LI5 555 aaKnown RBP6.8□□□□□ -1.32
CBWD3-210ENST00000614398 CBWD1Q9BRT8 395 aa6.8□□□□□ -1.32
CBWD3-210ENST00000614398 HAPLN2Q9GZV7 340 aa6.8□□□□□ -1.32
CBWD3-210ENST00000614398 CDT1Q9H211 546 aa6.8□□□□□ -1.32
CBWD3-210ENST00000614398 PLEKHA5Q9HAU0 1116 aa6.8□□□□□ -1.32
CBWD3-210ENST00000614398 C1orf112Q9NSG2 853 aa6.8□□□□□ -1.32
CBWD3-210ENST00000614398 MAGEC2Q9UBF1 373 aaPredicted RBP6.8□□□□□ -1.32
CBWD3-210ENST00000614398 AGO2Q9UKV8 859 aaKnown RBP6.8□□□□□ -1.32
CBWD3-210ENST00000614398 FRMD4BQ9Y2L6 1034 aa6.8□□□□□ -1.32
CBWD3-210ENST00000614398 NOC2LQ9Y3T9 749 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms