RNA–Protein interactions for RNA: ENST00000614197.4

NPIPB4-222, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5 BASIC

Gene NPIPB4, Length 1,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-222	ENST00000614197	FAM187B	Q17R55	369 aa		12.09	□□□□□ -0.47
NPIPB4-222	ENST00000614197	DCAF4L1	Q3SXM0	396 aa		12.09	□□□□□ -0.47
NPIPB4-222	ENST00000614197	ATAT1	Q5SQI0	421 aa		12.09	□□□□□ -0.47
NPIPB4-222	ENST00000614197	CDCA2	Q69YH5	1023 aa	Predicted RBP	12.09	□□□□□ -0.47
NPIPB4-222	ENST00000614197	KCTD17	Q8N5Z5	321 aa		12.09	□□□□□ -0.47
NPIPB4-222	ENST00000614197	IGSF22	Q8N9C0	903 aa		12.09	□□□□□ -0.47
NPIPB4-222	ENST00000614197	VN1R2	Q8NFZ6	395 aa		12.09	□□□□□ -0.47
NPIPB4-222	ENST00000614197	AUTS2	Q8WXX7	1259 aa		12.09	□□□□□ -0.47
NPIPB4-222	ENST00000614197	TIPIN	Q9BVW5	301 aa		12.09	□□□□□ -0.47
NPIPB4-222	ENST00000614197	FZD8	Q9H461	694 aa		12.09	□□□□□ -0.47
NPIPB4-222	ENST00000614197	C2CD2L	O14523	706 aa		12.08	□□□□□ -0.48
NPIPB4-222	ENST00000614197	INPPL1	O15357	1258 aa		12.08	□□□□□ -0.48
NPIPB4-222	ENST00000614197	TADA2A	O75478	443 aa		12.08	□□□□□ -0.48
NPIPB4-222	ENST00000614197	SOD2	P04179	222 aa		12.08	□□□□□ -0.48
NPIPB4-222	ENST00000614197	PDC	P20941	246 aa		12.08	□□□□□ -0.48
NPIPB4-222	ENST00000614197	TOB1	P50616	345 aa	Predicted RBP	12.08	□□□□□ -0.48
NPIPB4-222	ENST00000614197	CREM	Q03060	361 aa		12.08	□□□□□ -0.48
NPIPB4-222	ENST00000614197	PTPN14	Q15678	1187 aa		12.08	□□□□□ -0.48
NPIPB4-222	ENST00000614197	AMHR2	Q16671	573 aa		12.08	□□□□□ -0.48
NPIPB4-222	ENST00000614197	RARS2	Q5T160	578 aa	Known RBP	12.08	□□□□□ -0.48
NPIPB4-222	ENST00000614197	TMEM173	Q86WV6	379 aa	Predicted RBP	12.08	□□□□□ -0.48
NPIPB4-222	ENST00000614197	CDR2L	Q86X02	465 aa	Predicted RBP	12.08	□□□□□ -0.48
NPIPB4-222	ENST00000614197	C4orf32	Q8N8J7	132 aa		12.08	□□□□□ -0.48
NPIPB4-222	ENST00000614197	KHSRP	Q92945	711 aa	Known RBP eCLIP	12.08	□□□□□ -0.48
NPIPB4-222	ENST00000614197	ZFP42	Q96MM3	310 aa		12.08	□□□□□ -0.48
NPIPB4-222	ENST00000614197	TBC1D32	Q96NH3	1257 aa		12.08	□□□□□ -0.48
NPIPB4-222	ENST00000614197	HERC2P3	Q9BVR0	1158 aa		12.08	□□□□□ -0.48
NPIPB4-222	ENST00000614197	ADAM7	Q9H2U9	754 aa		12.08	□□□□□ -0.48
NPIPB4-222	ENST00000614197	SFXN1	Q9H9B4	322 aa		12.08	□□□□□ -0.48
NPIPB4-222	ENST00000614197	C17orf75	Q9HAS0	396 aa		12.08	□□□□□ -0.48
NPIPB4-222	ENST00000614197	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	12.08	□□□□□ -0.48
NPIPB4-222	ENST00000614197	KLK14	Q9P0G3	267 aa		12.08	□□□□□ -0.48
NPIPB4-222	ENST00000614197	MUTYH	Q9UIF7	546 aa		12.08	□□□□□ -0.48
NPIPB4-222	ENST00000614197	RBM19	Q9Y4C8	960 aa	Known RBP	12.08	□□□□□ -0.48
NPIPB4-222	ENST00000614197	KIAA1671	Q9BY89	1806 aa		12.07	□□□□□ -0.48
NPIPB4-222	ENST00000614197	VWA3A	A6NCI4	1184 aa		12.07	□□□□□ -0.48
NPIPB4-222	ENST00000614197	LOC730098	B7Z3J9	87 aa		12.07	□□□□□ -0.48
NPIPB4-222	ENST00000614197	TH	P07101	528 aa		12.07	□□□□□ -0.48
NPIPB4-222	ENST00000614197	UBA7	P41226	1012 aa		12.07	□□□□□ -0.48
NPIPB4-222	ENST00000614197	SMTN	P53814	917 aa		12.07	□□□□□ -0.48
NPIPB4-222	ENST00000614197	YARS	P54577	528 aa	Known RBP	12.07	□□□□□ -0.48
NPIPB4-222	ENST00000614197	PEX3	P56589	373 aa		12.07	□□□□□ -0.48
NPIPB4-222	ENST00000614197	STRN3	Q13033	797 aa		12.07	□□□□□ -0.48
NPIPB4-222	ENST00000614197	HERC4	Q5GLZ8	1057 aa	Predicted RBP	12.07	□□□□□ -0.48
NPIPB4-222	ENST00000614197	ATF7IP2	Q5U623	682 aa		12.07	□□□□□ -0.48
NPIPB4-222	ENST00000614197	ARL6IP4	Q66PJ3	421 aa	Known RBP	12.07	□□□□□ -0.48
NPIPB4-222	ENST00000614197	SYCE2	Q6PIF2	218 aa		12.07	□□□□□ -0.48
NPIPB4-222	ENST00000614197	BRAP	Q7Z569	592 aa		12.07	□□□□□ -0.48
NPIPB4-222	ENST00000614197	COLGALT2	Q8IYK4	626 aa		12.07	□□□□□ -0.48
NPIPB4-222	ENST00000614197	BCL7C	Q8WUZ0	217 aa	Predicted RBP	12.07	□□□□□ -0.48
NPIPB4-222	ENST00000614197	SUSD6	Q92537	303 aa		12.07	□□□□□ -0.48
NPIPB4-222	ENST00000614197	FAM122A	Q96E09	287 aa		12.07	□□□□□ -0.48
NPIPB4-222	ENST00000614197	CALML4	Q96GE6	196 aa		12.07	□□□□□ -0.48
NPIPB4-222	ENST00000614197	AK8	Q96MA6	479 aa		12.07	□□□□□ -0.48
NPIPB4-222	ENST00000614197	MFSD14A	Q96MC6	490 aa		12.07	□□□□□ -0.48
NPIPB4-222	ENST00000614197	FBXL18	Q96ME1	805 aa		12.07	□□□□□ -0.48
NPIPB4-222	ENST00000614197	KLHL5	Q96PQ7	755 aa		12.07	□□□□□ -0.48
NPIPB4-222	ENST00000614197	TCHP	Q9BT92	498 aa		12.07	□□□□□ -0.48
NPIPB4-222	ENST00000614197	CCDC94	Q9BW85	323 aa	Predicted RBP	12.07	□□□□□ -0.48
NPIPB4-222	ENST00000614197	S1PR5	Q9H228	398 aa		12.07	□□□□□ -0.48
NPIPB4-222	ENST00000614197	KMT5A	Q9NQR1	393 aa		12.07	□□□□□ -0.48
NPIPB4-222	ENST00000614197	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	12.07	□□□□□ -0.48
NPIPB4-222	ENST00000614197	TOPORS	Q9NS56	1045 aa	Predicted RBP	12.07	□□□□□ -0.48
NPIPB4-222	ENST00000614197	BRWD1	Q9NSI6	2320 aa		12.06	□□□□□ -0.48
NPIPB4-222	ENST00000614197	MYO7A	Q13402	2215 aa		12.06	□□□□□ -0.48
NPIPB4-222	ENST00000614197	WDR81	Q562E7	1941 aa		12.06	□□□□□ -0.48
NPIPB4-222	ENST00000614197	VPS37C	A5D8V6	355 aa	Predicted RBP	12.06	□□□□□ -0.48
NPIPB4-222	ENST00000614197		E9PMD0	336 aa		12.06	□□□□□ -0.48
NPIPB4-222	ENST00000614197		H0YCG3	227 aa		12.06	□□□□□ -0.48
NPIPB4-222	ENST00000614197	HIP1R	O75146	1068 aa		12.06	□□□□□ -0.48
NPIPB4-222	ENST00000614197	GLUD1	P00367	558 aa		12.06	□□□□□ -0.48
NPIPB4-222	ENST00000614197	EPCAM	P16422	314 aa		12.06	□□□□□ -0.48
NPIPB4-222	ENST00000614197	AFF1	P51825	1210 aa	Known RBP	12.06	□□□□□ -0.48
NPIPB4-222	ENST00000614197	ATP2C1	P98194	919 aa	Predicted RBP	12.06	□□□□□ -0.48
NPIPB4-222	ENST00000614197	DSC1	Q08554	894 aa		12.06	□□□□□ -0.48
NPIPB4-222	ENST00000614197	ELAVL2	Q12926	359 aa	Known RBP	12.06	□□□□□ -0.48
NPIPB4-222	ENST00000614197	TUSC3	Q13454	348 aa		12.06	□□□□□ -0.48
NPIPB4-222	ENST00000614197	KCNC3	Q14003	757 aa		12.06	□□□□□ -0.48
NPIPB4-222	ENST00000614197	HSP90AA2P	Q14568	343 aa	Predicted RBP	12.06	□□□□□ -0.48
NPIPB4-222	ENST00000614197	USP41	Q3LFD5	358 aa		12.06	□□□□□ -0.48
NPIPB4-222	ENST00000614197	PLCD3	Q8N3E9	789 aa		12.06	□□□□□ -0.48
NPIPB4-222	ENST00000614197	BSND	Q8WZ55	320 aa		12.06	□□□□□ -0.48
NPIPB4-222	ENST00000614197	ACSF2	Q96CM8	615 aa	Predicted RBP	12.06	□□□□□ -0.48
NPIPB4-222	ENST00000614197	MRPL4	Q9BYD3	311 aa	Known RBP	12.06	□□□□□ -0.48
NPIPB4-222	ENST00000614197	PDZD7	Q9H5P4	517 aa		12.06	□□□□□ -0.48
NPIPB4-222	ENST00000614197	SNTG2	Q9NY99	539 aa		12.06	□□□□□ -0.48
NPIPB4-222	ENST00000614197	KCND2	Q9NZV8	630 aa		12.06	□□□□□ -0.48
NPIPB4-222	ENST00000614197	ADAM28	Q9UKQ2	775 aa		12.06	□□□□□ -0.48
NPIPB4-222	ENST00000614197	GDA	Q9Y2T3	454 aa		12.06	□□□□□ -0.48
NPIPB4-222	ENST00000614197	SF3B1	O75533	1304 aa	Known RBP eCLIP	12.06	□□□□□ -0.48
NPIPB4-222	ENST00000614197	NCOR1	O75376	2440 aa		12.06	□□□□□ -0.48
NPIPB4-222	ENST00000614197	PP2D1	A8MPX8	630 aa		12.05	□□□□□ -0.48
NPIPB4-222	ENST00000614197	SLC26A4	O43511	780 aa		12.05	□□□□□ -0.48
NPIPB4-222	ENST00000614197	RECQL4	O94761	1208 aa		12.05	□□□□□ -0.48
NPIPB4-222	ENST00000614197	CNP	P09543	421 aa	Known RBP	12.05	□□□□□ -0.48
NPIPB4-222	ENST00000614197	SP100	P23497	879 aa	Predicted RBP	12.05	□□□□□ -0.48
NPIPB4-222	ENST00000614197	CDC25A	P30304	524 aa		12.05	□□□□□ -0.48
NPIPB4-222	ENST00000614197	NPTX2	P47972	431 aa		12.05	□□□□□ -0.48
NPIPB4-222	ENST00000614197	ECM1	Q16610	540 aa		12.05	□□□□□ -0.48
NPIPB4-222	ENST00000614197	FUT10	Q6P4F1	479 aa		12.05	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms