RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 GRIK3Q13003 919 aa25.1■■□□□ 1.61
FAM228B-208ENST00000613899 NECTIN4Q96NY8 510 aa25.1■■□□□ 1.61
FAM228B-208ENST00000613899 RPS6KC1Q96S38 1066 aa25.1■■□□□ 1.61
FAM228B-208ENST00000613899 ADPGKQ9BRR6 497 aa25.1■■□□□ 1.61
FAM228B-208ENST00000613899 HERC2P3Q9BVR0 1158 aa25.1■■□□□ 1.61
FAM228B-208ENST00000613899 CCDC113Q9H0I3 377 aa25.1■■□□□ 1.61
FAM228B-208ENST00000613899 ADAM7Q9H2U9 754 aa25.1■■□□□ 1.61
FAM228B-208ENST00000613899 MRPL17Q9NRX2 175 aaKnown RBP25.1■■□□□ 1.61
FAM228B-208ENST00000613899 MARCH5Q9NX47 278 aa25.1■■□□□ 1.61
FAM228B-208ENST00000613899 PARP2Q9UGN5 583 aa25.1■■□□□ 1.61
FAM228B-208ENST00000613899 DNM3Q9UQ16 869 aa25.1■■□□□ 1.61
FAM228B-208ENST00000613899 SSX2IPQ9Y2D8 614 aa25.1■■□□□ 1.61
FAM228B-208ENST00000613899 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.1■■□□□ 1.61
FAM228B-208ENST00000613899 URODP06132 367 aa25.09■■□□□ 1.61
FAM228B-208ENST00000613899 EFNA5P52803 228 aa25.09■■□□□ 1.61
FAM228B-208ENST00000613899 PDZD7Q9H5P4 517 aa25.09■■□□□ 1.61
FAM228B-208ENST00000613899 MIOSQ9NXC5 875 aa25.09■■□□□ 1.61
FAM228B-208ENST00000613899 SMC3Q9UQE7 1217 aa25.09■■□□□ 1.61
FAM228B-208ENST00000613899 ACKR2O00590 384 aa25.08■■□□□ 1.61
FAM228B-208ENST00000613899 SSBP05455 408 aaKnown RBP eCLIP25.08■■□□□ 1.61
FAM228B-208ENST00000613899 ATP2C1P98194 919 aaPredicted RBP25.08■■□□□ 1.61
FAM228B-208ENST00000613899 GSTCDQ8NEC7 633 aa25.08■■□□□ 1.61
FAM228B-208ENST00000613899 PP2D1A8MPX8 630 aa25.07■■□□□ 1.6
FAM228B-208ENST00000613899 EPCAMP16422 314 aa25.07■■□□□ 1.6
FAM228B-208ENST00000613899 LIG1P18858 919 aa25.07■■□□□ 1.6
FAM228B-208ENST00000613899 MTHFRP42898 656 aa25.07■■□□□ 1.6
FAM228B-208ENST00000613899 IL17AQ16552 155 aa25.07■■□□□ 1.6
FAM228B-208ENST00000613899 RNF168Q8IYW5 571 aaPredicted RBP25.07■■□□□ 1.6
FAM228B-208ENST00000613899 SLC22A17Q8WUG5 538 aa25.07■■□□□ 1.6
FAM228B-208ENST00000613899 RIPOR3Q96MK2 946 aa25.07■■□□□ 1.6
FAM228B-208ENST00000613899 KLHL5Q96PQ7 755 aa25.07■■□□□ 1.6
FAM228B-208ENST00000613899 COLEC11Q9BWP8 271 aa25.07■■□□□ 1.6
FAM228B-208ENST00000613899 KLK14Q9P0G3 267 aa25.07■■□□□ 1.6
FAM228B-208ENST00000613899 NR2E1Q9Y466 385 aa25.07■■□□□ 1.6
FAM228B-208ENST00000613899 ARIH1Q9Y4X5 557 aaPredicted RBP25.07■■□□□ 1.6
FAM228B-208ENST00000613899 E9PMD0 336 aa25.06■■□□□ 1.6
FAM228B-208ENST00000613899 KLRC2P26717 231 aa25.06■■□□□ 1.6
FAM228B-208ENST00000613899 GLUD2P49448 558 aa25.06■■□□□ 1.6
FAM228B-208ENST00000613899 DCAF4L1Q3SXM0 396 aa25.06■■□□□ 1.6
FAM228B-208ENST00000613899 RARS2Q5T160 578 aaKnown RBP25.06■■□□□ 1.6
FAM228B-208ENST00000613899 CABP7Q86V35 215 aa25.06■■□□□ 1.6
FAM228B-208ENST00000613899 KIFC3Q9BVG8 833 aa25.06■■□□□ 1.6
FAM228B-208ENST00000613899 TTLL13PA6NNM8 815 aa25.05■■□□□ 1.6
FAM228B-208ENST00000613899 LILRB3O75022 631 aa25.05■■□□□ 1.6
FAM228B-208ENST00000613899 CNPP09543 421 aaKnown RBP25.05■■□□□ 1.6
FAM228B-208ENST00000613899 CDC25AP30304 524 aa25.05■■□□□ 1.6
FAM228B-208ENST00000613899 CLCN4P51793 760 aa25.05■■□□□ 1.6
FAM228B-208ENST00000613899 KIAA1841Q6NSI8 718 aa25.05■■□□□ 1.6
FAM228B-208ENST00000613899 APBB1IPQ7Z5R6 666 aaPredicted RBP25.05■■□□□ 1.6
FAM228B-208ENST00000613899 KCTD17Q8N5Z5 321 aa25.05■■□□□ 1.6
FAM228B-208ENST00000613899 EDAQ92838 391 aa25.05■■□□□ 1.6
FAM228B-208ENST00000613899 DRC1Q96MC2 740 aa25.05■■□□□ 1.6
FAM228B-208ENST00000613899 SFXN1Q9H9B4 322 aa25.05■■□□□ 1.6
FAM228B-208ENST00000613899 PHLPP2Q6ZVD8 1323 aa25.05■■□□□ 1.6
FAM228B-208ENST00000613899 SPDYE4A6NLX3 237 aa25.04■■□□□ 1.6
FAM228B-208ENST00000613899 C2CD2LO14523 706 aa25.04■■□□□ 1.6
FAM228B-208ENST00000613899 EFEMP2O95967 443 aa25.04■■□□□ 1.6
FAM228B-208ENST00000613899 ADH1AP07327 375 aa25.04■■□□□ 1.6
FAM228B-208ENST00000613899 DMP1Q13316 513 aaPredicted RBP25.04■■□□□ 1.6
FAM228B-208ENST00000613899 ARL6IP4Q66PJ3 421 aaKnown RBP25.04■■□□□ 1.6
FAM228B-208ENST00000613899 FBXL18Q96ME1 805 aa25.04■■□□□ 1.6
FAM228B-208ENST00000613899 MMTAG2Q9BU76 263 aaKnown RBP25.04■■□□□ 1.6
FAM228B-208ENST00000613899 NT5C3AQ9H0P0 336 aa25.04■■□□□ 1.6
FAM228B-208ENST00000613899 POMKQ9H5K3 350 aa25.04■■□□□ 1.6
FAM228B-208ENST00000613899 POLD4Q9HCU8 107 aa25.04■■□□□ 1.6
FAM228B-208ENST00000613899 SNTG2Q9NY99 539 aa25.04■■□□□ 1.6
FAM228B-208ENST00000613899 CDH22Q9UJ99 828 aa25.04■■□□□ 1.6
FAM228B-208ENST00000613899 ADAM28Q9UKQ2 775 aa25.04■■□□□ 1.6
FAM228B-208ENST00000613899 RECQL4O94761 1208 aa25.03■■□□□ 1.6
FAM228B-208ENST00000613899 EDN1P05305 212 aa25.03■■□□□ 1.6
FAM228B-208ENST00000613899 DSG1Q02413 1049 aa25.03■■□□□ 1.6
FAM228B-208ENST00000613899 TUSC3Q13454 348 aa25.03■■□□□ 1.6
FAM228B-208ENST00000613899 ATAT1Q5SQI0 421 aa25.03■■□□□ 1.6
FAM228B-208ENST00000613899 HYIQ5T013 277 aa25.03■■□□□ 1.6
FAM228B-208ENST00000613899 ATF7IP2Q5U623 682 aa25.03■■□□□ 1.6
FAM228B-208ENST00000613899 LARP1BQ659C4 914 aaKnown RBP25.03■■□□□ 1.6
FAM228B-208ENST00000613899 FUT10Q6P4F1 479 aa25.03■■□□□ 1.6
FAM228B-208ENST00000613899 TIPINQ9BVW5 301 aa25.03■■□□□ 1.6
FAM228B-208ENST00000613899 DENND4AQ7Z401 1863 aa25.02■■□□□ 1.6
FAM228B-208ENST00000613899 VWA3AA6NCI4 1184 aa25.02■■□□□ 1.6
FAM228B-208ENST00000613899 CCDC169A6NNP5 214 aa25.02■■□□□ 1.6
FAM228B-208ENST00000613899 F8W810 466 aa25.02■■□□□ 1.6
FAM228B-208ENST00000613899 K7ERI5 159 aa25.02■■□□□ 1.6
FAM228B-208ENST00000613899 HIP1RO75146 1068 aa25.02■■□□□ 1.6
FAM228B-208ENST00000613899 PEX3P56589 373 aa25.02■■□□□ 1.6
FAM228B-208ENST00000613899 ZRSR1Q15695 479 aaKnown RBP25.02■■□□□ 1.6
FAM228B-208ENST00000613899 EEF1DP3Q658K8 133 aa25.02■■□□□ 1.6
FAM228B-208ENST00000613899 RINT1Q6NUQ1 792 aa25.02■■□□□ 1.6
FAM228B-208ENST00000613899 ELMSAN1Q6PJG2 1045 aa25.02■■□□□ 1.6
FAM228B-208ENST00000613899 TAS1R1Q7RTX1 841 aa25.02■■□□□ 1.6
FAM228B-208ENST00000613899 GPR65Q8IYL9 337 aa25.02■■□□□ 1.6
FAM228B-208ENST00000613899 C12orf76Q8N812 135 aaPredicted RBP25.02■■□□□ 1.6
FAM228B-208ENST00000613899 RUSC1Q9BVN2 902 aa25.02■■□□□ 1.6
FAM228B-208ENST00000613899 C17orf75Q9HAS0 396 aa25.02■■□□□ 1.6
FAM228B-208ENST00000613899 TSHZ2Q9NRE2 1034 aa25.02■■□□□ 1.6
FAM228B-208ENST00000613899 DPP7Q9UHL4 492 aa25.02■■□□□ 1.6
FAM228B-208ENST00000613899 USP20Q9Y2K6 914 aa25.02■■□□□ 1.6
FAM228B-208ENST00000613899 TECTAO75443 2155 aa25.02■■□□□ 1.6
FAM228B-208ENST00000613899 PLXNA3P51805 1871 aa25.01■■□□□ 1.59
FAM228B-208ENST00000613899 THP07101 528 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms