RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 COG4Q9H9E3 785 aa18.42■□□□□ 0.54
HMGXB3-206ENST00000613459 BATF3Q9NR55 127 aa18.42■□□□□ 0.54
HMGXB3-206ENST00000613459 MYL3P08590 195 aa18.42■□□□□ 0.54
HMGXB3-206ENST00000613459 MRPS25P82663 173 aaKnown RBP18.42■□□□□ 0.54
HMGXB3-206ENST00000613459 CAPRIN1Q14444 709 aaKnown RBP18.42■□□□□ 0.54
HMGXB3-206ENST00000613459 EEPD1Q7L9B9 569 aa18.42■□□□□ 0.54
HMGXB3-206ENST00000613459 AGPAT1Q99943 283 aa18.42■□□□□ 0.54
HMGXB3-206ENST00000613459 CD209Q9NNX6 404 aa18.42■□□□□ 0.54
HMGXB3-206ENST00000613459 RNF25Q96BH1 459 aaPredicted RBP18.42■□□□□ 0.54
HMGXB3-206ENST00000613459 POLR3FQ9H1D9 316 aaPredicted RBP18.42■□□□□ 0.54
HMGXB3-206ENST00000613459 EPN3Q9H201 632 aa18.42■□□□□ 0.54
HMGXB3-206ENST00000613459 IRAK4Q9NWZ3 460 aa18.42■□□□□ 0.54
HMGXB3-206ENST00000613459 FNDC3AQ9Y2H6 1198 aaKnown RBP18.42■□□□□ 0.54
HMGXB3-206ENST00000613459 APOL1O14791 398 aa18.42■□□□□ 0.54
HMGXB3-206ENST00000613459 IL10P22301 178 aa18.42■□□□□ 0.54
HMGXB3-206ENST00000613459 MIGA2Q7L4E1 593 aa18.42■□□□□ 0.54
HMGXB3-206ENST00000613459 TEX2Q8IWB9 1127 aa18.42■□□□□ 0.54
HMGXB3-206ENST00000613459 FAM129AQ9BZQ8 928 aa18.42■□□□□ 0.54
HMGXB3-206ENST00000613459 FAM49AQ9H0Q0 323 aaPredicted RBP18.42■□□□□ 0.54
HMGXB3-206ENST00000613459 CXorf56Q9H5V9 222 aa18.42■□□□□ 0.54
HMGXB3-206ENST00000613459 RNF146Q9NTX7 359 aa18.42■□□□□ 0.54
HMGXB3-206ENST00000613459 HERC5Q9UII4 1024 aaKnown RBP18.42■□□□□ 0.54
HMGXB3-206ENST00000613459 HECW2Q9P2P5 1572 aa18.42■□□□□ 0.54
HMGXB3-206ENST00000613459 IGKV5-2P06315 115 aa18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 SNRPFP62306 86 aaKnown RBP18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 LZICQ8WZA0 190 aa18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 TET3O43151 1660 aa18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 CCDC195A0A1B0GUA6 201 aa18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 E5RI56 91 aa18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 SCP2P22307 547 aa18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 SERPINB9P50453 376 aa18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 MED21Q13503 144 aa18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 PTK2BQ14289 1009 aa18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 DUOXA2Q1HG44 320 aa18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 ZBED8Q8IZ13 594 aa18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 EFCAB14O75071 495 aa18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 STAG2Q8N3U4 1231 aa18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 SP110Q9HB58 689 aa18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 ADA2Q9NZK5 511 aa18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 USP17L10C9JJH3 530 aa18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 EIF3DO15371 548 aaKnown RBP eCLIP18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 CDC27P30260 824 aa18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 RANBP1P43487 201 aa18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 RAD51Q06609 339 aa18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 DDX47Q9H0S4 455 aaKnown RBP18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 PREX2Q70Z35 1606 aa18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 CFAP69A5D8W1 941 aa18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 PRR29P0C7W0 189 aa18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 SNRNP48Q6IEG0 339 aaKnown RBP18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 RNF217Q8TC41 542 aa18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 KRT35Q92764 455 aa18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 TNIP3Q96KP6 325 aa18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 ACAD9Q9H845 621 aa18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 DCTN4Q9UJW0 460 aa18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 ARL2BPQ9Y2Y0 163 aa18.41■□□□□ 0.54
HMGXB3-206ENST00000613459 GTPBP10A4D1E9 387 aaKnown RBP18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 TBX3O15119 743 aa18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 DIAPH2O60879 1101 aa18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 SPAG6O75602 509 aa18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 SPATA21Q7Z572 469 aa18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 ASAP3Q8TDY4 903 aa18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 CEP95Q96GE4 821 aa18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 LXNQ9BS40 222 aa18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 KDM4CQ9H3R0 1056 aa18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 FARP1Q9Y4F1 1045 aaPredicted RBP18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 CPDO75976 1380 aa18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 PI4K2BG5E9Z4 385 aa18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 STXBP3O00186 592 aa18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 APOA1P02647 267 aa18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 DNAL1Q4LDG9 190 aa18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 CCNYL1Q8N7R7 359 aa18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 OXER1Q8TDS5 423 aa18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 PLA2R1Q13018 1463 aa18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 MEFVO15553 781 aaPredicted RBP18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 CYP2D6P10635 497 aa18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 PRAMEP78395 509 aa18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 IRX1P78414 480 aaPredicted RBP18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 AP1B1Q10567 949 aa18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 EIF2AK1Q9BQI3 630 aaKnown RBP18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 HACD3Q9P035 362 aa18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 SNX12Q9UMY4 172 aa18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 COL15A1P39059 1388 aa18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 ZNF197O14709 1029 aa18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 MAP3K7CLP57077 242 aa18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 HIC1Q14526 733 aa18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 C1orf228Q6PIY5 440 aa18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 PATL1Q86TB9 770 aaKnown RBP18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 PASD1Q8IV76 773 aa18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 SPATA4Q8NEY3 305 aa18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 OTUB1Q96FW1 271 aaPredicted RBP18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 RBAKQ9NYW8 714 aaPredicted RBP18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 FBXL5Q9UKA1 691 aa18.4■□□□□ 0.54
HMGXB3-206ENST00000613459 NCK2O43639 380 aa18.39■□□□□ 0.54
HMGXB3-206ENST00000613459 TYK2P29597 1187 aa18.39■□□□□ 0.54
HMGXB3-206ENST00000613459 RAP1GDS1P52306 607 aa18.39■□□□□ 0.54
HMGXB3-206ENST00000613459 HIF1AQ16665 826 aa18.39■□□□□ 0.54
HMGXB3-206ENST00000613459 UGP2Q16851 508 aa18.39■□□□□ 0.54
HMGXB3-206ENST00000613459 TWF2Q6IBS0 349 aaKnown RBP18.39■□□□□ 0.54
HMGXB3-206ENST00000613459 SLC26A7Q8TE54 656 aa18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms