RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 PIAS1O75925 651 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 GH1P01241 217 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 ALDH1B1P30837 517 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 CHKAP35790 457 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 SMTNP53814 917 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 XKR9Q5GH70 373 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 ERMARDQ5T6L9 678 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 CYP4F22Q6NT55 531 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 RNF207Q6ZRF8 634 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 CCDC91Q7Z6B0 441 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 RHOT2Q8IXI1 618 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 PARP9Q8IXQ6 854 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 XXYLT1Q8NBI6 393 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 TAS1R2Q8TE23 839 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 TPX2Q9ULW0 747 aaKnown RBP15.09■□□□□ 0.01
COL6A1-207ENST00000612273 NUGGCQ68CJ6 796 aa15.08■□□□□ 0
COL6A1-207ENST00000612273 C9orf72Q96LT7 481 aa15.08■□□□□ 0
COL6A1-207ENST00000612273 FAM129AQ9BZQ8 928 aa15.08■□□□□ 0
COL6A1-207ENST00000612273 CDK5RAP2Q96SN8 1893 aa15.08■□□□□ 0
COL6A1-207ENST00000612273 FRMPD4Q14CM0 1322 aa15.08■□□□□ 0
COL6A1-207ENST00000612273 PTGIRP43119 386 aa15.08■□□□□ 0
COL6A1-207ENST00000612273 KRT17Q04695 432 aa15.08■□□□□ 0
COL6A1-207ENST00000612273 SNCBQ16143 134 aa15.08■□□□□ 0
COL6A1-207ENST00000612273 UGCGQ16739 394 aa15.08■□□□□ 0
COL6A1-207ENST00000612273 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.08■□□□□ 0
COL6A1-207ENST00000612273 SLC5A5Q92911 643 aa15.08■□□□□ 0
COL6A1-207ENST00000612273 SYT11Q9BT88 431 aa15.08■□□□□ 0
COL6A1-207ENST00000612273 ADAM7Q9H2U9 754 aa15.08■□□□□ 0
COL6A1-207ENST00000612273 MTUS1Q9ULD2 1270 aa15.08■□□□□ 0
COL6A1-207ENST00000612273 NCANO14594 1321 aa15.07■□□□□ 0
COL6A1-207ENST00000612273 SYNGAP1Q96PV0 1343 aa15.07■□□□□ 0
COL6A1-207ENST00000612273 TCP11X1B4DZS4 312 aa15.07■□□□□ 0
COL6A1-207ENST00000612273 CHRNB2P17787 502 aa15.07■□□□□ 0
COL6A1-207ENST00000612273 HOXA7P31268 230 aaPredicted RBP15.07■□□□□ 0
COL6A1-207ENST00000612273 COILP38432 576 aaPredicted RBP15.07■□□□□ 0
COL6A1-207ENST00000612273 RASA3Q14644 834 aa15.07■□□□□ 0
COL6A1-207ENST00000612273 KAZNQ674X7 775 aa15.07■□□□□ 0
COL6A1-207ENST00000612273 FAM47EQ6ZV65 393 aa15.07■□□□□ 0
COL6A1-207ENST00000612273 SLC13A5Q86YT5 568 aaPredicted RBP15.07■□□□□ 0
COL6A1-207ENST00000612273 ANKS4BQ8N8V4 417 aa15.07■□□□□ 0
COL6A1-207ENST00000612273 ARHGEF2Q92974 986 aaKnown RBP15.07■□□□□ 0
COL6A1-207ENST00000612273 RAVER2Q9HCJ3 691 aaKnown RBP15.07■□□□□ 0
COL6A1-207ENST00000612273 DMAC2Q9NW81 257 aa15.07■□□□□ 0
COL6A1-207ENST00000612273 L3MBTL1Q9Y468 752 aa15.07■□□□□ 0
COL6A1-207ENST00000612273 PPIP5K2O43314 1243 aa15.07■□□□□ 0
COL6A1-207ENST00000612273 RIPK2O43353 540 aa15.07■□□□□ 0
COL6A1-207ENST00000612273 EIF3BP55884 814 aaKnown RBP15.07■□□□□ 0
COL6A1-207ENST00000612273 INTS8Q75QN2 995 aaKnown RBP15.07■□□□□ 0
COL6A1-207ENST00000612273 GMCL1P1Q8NEA9 526 aa15.07■□□□□ 0
COL6A1-207ENST00000612273 GIMAP7Q8NHV1 300 aa15.07■□□□□ 0
COL6A1-207ENST00000612273 MKNK1Q9BUB5 465 aa15.07■□□□□ 0
COL6A1-207ENST00000612273 CDC42EP4Q9H3Q1 356 aaKnown RBP15.07■□□□□ 0
COL6A1-207ENST00000612273 TMOD2Q9NZR1 351 aa15.07■□□□□ 0
COL6A1-207ENST00000612273 ECEL1O95672 775 aa15.07■□□□□ 0
COL6A1-207ENST00000612273 HARSP12081 509 aaKnown RBP15.07■□□□□ 0
COL6A1-207ENST00000612273 CHRNA3P32297 505 aa15.07■□□□□ 0
COL6A1-207ENST00000612273 ADCY8P40145 1251 aa15.07■□□□□ 0
COL6A1-207ENST00000612273 PPP2R5CQ13362 524 aa15.07■□□□□ 0
COL6A1-207ENST00000612273 TLCD1Q96CP7 247 aa15.07■□□□□ 0
COL6A1-207ENST00000612273 BICD1Q96G01 975 aa15.07■□□□□ 0
COL6A1-207ENST00000612273 HERPUD2Q9BSE4 406 aa15.07■□□□□ 0
COL6A1-207ENST00000612273 TACO1Q9BSH4 297 aaKnown RBP15.07■□□□□ 0
COL6A1-207ENST00000612273 BTAF1O14981 1849 aa15.06■□□□□ 0
COL6A1-207ENST00000612273 CHUKO15111 745 aa15.06■□□□□ 0
COL6A1-207ENST00000612273 RASSF9O75901 435 aa15.06■□□□□ 0
COL6A1-207ENST00000612273 CDC25CP30307 473 aa15.06■□□□□ 0
COL6A1-207ENST00000612273 DHX34Q14147 1143 aaKnown RBP15.06■□□□□ 0
COL6A1-207ENST00000612273 KIF22Q14807 665 aa15.06■□□□□ 0
COL6A1-207ENST00000612273 PPP2R5AQ15172 486 aa15.06■□□□□ 0
COL6A1-207ENST00000612273 C1orf220Q5T0J3 134 aa15.06■□□□□ 0
COL6A1-207ENST00000612273 EMC10Q5UCC4 262 aa15.06■□□□□ 0
COL6A1-207ENST00000612273 STRIP1Q5VSL9 837 aa15.06■□□□□ 0
COL6A1-207ENST00000612273 CC2D2BQ6DHV5 1058 aa15.06■□□□□ 0
COL6A1-207ENST00000612273 ACSF2Q96CM8 615 aaPredicted RBP15.06■□□□□ 0
COL6A1-207ENST00000612273 TTC7AQ9ULT0 858 aaPredicted RBP15.06■□□□□ 0
COL6A1-207ENST00000612273 TRIM33Q9UPN9 1127 aa15.06■□□□□ 0
COL6A1-207ENST00000612273 TMEM120BA0PK00 339 aa15.06■□□□□ 0
COL6A1-207ENST00000612273 CCT8L1PA6NM43 557 aa15.06■□□□□ 0
COL6A1-207ENST00000612273 C21orf2O43822 256 aa15.06■□□□□ 0
COL6A1-207ENST00000612273 ATP9AO75110 1047 aa15.06■□□□□ 0
COL6A1-207ENST00000612273 RTN2O75298 545 aa15.06■□□□□ 0
COL6A1-207ENST00000612273 SPP2Q13103 211 aa15.06■□□□□ 0
COL6A1-207ENST00000612273 AUHQ13825 339 aaKnown RBP15.06■□□□□ 0
COL6A1-207ENST00000612273 SNRNP35Q16560 246 aaKnown RBP15.06■□□□□ 0
COL6A1-207ENST00000612273 SPOPLQ6IQ16 392 aa15.06■□□□□ 0
COL6A1-207ENST00000612273 SRRM1Q8IYB3 904 aaKnown RBP15.06■□□□□ 0
COL6A1-207ENST00000612273 CCT6BQ92526 530 aa15.06■□□□□ 0
COL6A1-207ENST00000612273 HAUS1Q96CS2 278 aa15.06■□□□□ 0
COL6A1-207ENST00000612273 ACCSQ96QU6 501 aa15.06■□□□□ 0
COL6A1-207ENST00000612273 NCAPGQ9BPX3 1015 aa15.06■□□□□ 0
COL6A1-207ENST00000612273 IDI2Q9BXS1 227 aa15.06■□□□□ 0
COL6A1-207ENST00000612273 ARFGEF1Q9Y6D6 1849 aa15.06■□□□□ 0
COL6A1-207ENST00000612273 PFASO15067 1338 aa15.06■□□□□ 0
COL6A1-207ENST00000612273 FAM187AA6NFU0 413 aa15.05■□□□□ 0
COL6A1-207ENST00000612273 PI4K2BG5E9Z4 385 aa15.05■□□□□ 0
COL6A1-207ENST00000612273 MAPK4P31152 587 aa15.05■□□□□ 0
COL6A1-207ENST00000612273 RARRES1P49788 294 aa15.05■□□□□ 0
COL6A1-207ENST00000612273 FMO1Q01740 532 aa15.05■□□□□ 0
COL6A1-207ENST00000612273 YTHDF3Q7Z739 585 aaKnown RBP15.05■□□□□ 0
COL6A1-207ENST00000612273 EXOC3L1Q86VI1 746 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms