RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 B4GALT3O60512 393 aa28.59■■■□□ 2.17
VEGFA-226ENST00000611736 ALDH7A1P49419 539 aaKnown RBP28.59■■■□□ 2.17
VEGFA-226ENST00000611736 SCNN1GP51170 649 aa28.59■■■□□ 2.17
VEGFA-226ENST00000611736 TCEAL5Q5H9L2 206 aa28.59■■■□□ 2.17
VEGFA-226ENST00000611736 SLC39A11Q8N1S5 342 aa28.59■■■□□ 2.17
VEGFA-226ENST00000611736 FAM193BQ96PV7 902 aaPredicted RBP28.59■■■□□ 2.17
VEGFA-226ENST00000611736 SNTG2Q9NY99 539 aa28.59■■■□□ 2.17
VEGFA-226ENST00000611736 DNAJB4Q9UDY4 337 aa28.59■■■□□ 2.17
VEGFA-226ENST00000611736 TNFSF13BQ9Y275 285 aa28.59■■■□□ 2.17
VEGFA-226ENST00000611736 TCHHQ07283 1943 aa28.59■■■□□ 2.17
VEGFA-226ENST00000611736 MYMKA6NI61 221 aa28.58■■■□□ 2.17
VEGFA-226ENST00000611736 K7ENM7 598 aa28.58■■■□□ 2.17
VEGFA-226ENST00000611736 IRS1P35568 1242 aa28.58■■■□□ 2.17
VEGFA-226ENST00000611736 NCKAP1LP55160 1127 aa28.58■■■□□ 2.17
VEGFA-226ENST00000611736 KRT85P78386 507 aa28.58■■■□□ 2.17
VEGFA-226ENST00000611736 UBE3AQ05086 875 aa28.58■■■□□ 2.17
VEGFA-226ENST00000611736 DDX12PQ92771 950 aa28.58■■■□□ 2.17
VEGFA-226ENST00000611736 MIOSQ9NXC5 875 aa28.58■■■□□ 2.17
VEGFA-226ENST00000611736 THEGQ9P2T0 379 aa28.58■■■□□ 2.17
VEGFA-226ENST00000611736 TDRD15B5MCY1 1934 aaKnown RBP28.58■■■□□ 2.17
VEGFA-226ENST00000611736 H0YCG3 227 aa28.57■■■□□ 2.16
VEGFA-226ENST00000611736 DDHD2O94830 711 aa28.57■■■□□ 2.16
VEGFA-226ENST00000611736 PLCB3Q01970 1234 aa28.57■■■□□ 2.16
VEGFA-226ENST00000611736 ZNF568Q3ZCX4 644 aa28.57■■■□□ 2.16
VEGFA-226ENST00000611736 HAUS6Q7Z4H7 955 aa28.57■■■□□ 2.16
VEGFA-226ENST00000611736 APBB1IPQ7Z5R6 666 aaPredicted RBP28.57■■■□□ 2.16
VEGFA-226ENST00000611736 MRPS27Q92552 414 aaKnown RBP28.57■■■□□ 2.16
VEGFA-226ENST00000611736 DHX58Q96C10 678 aa28.57■■■□□ 2.16
VEGFA-226ENST00000611736 GDAQ9Y2T3 454 aa28.57■■■□□ 2.16
VEGFA-226ENST00000611736 PCDHGC5Q9Y5F6 944 aa28.57■■■□□ 2.16
VEGFA-226ENST00000611736 ATP6V1DQ9Y5K8 247 aa28.57■■■□□ 2.16
VEGFA-226ENST00000611736 INPPL1O15357 1258 aa28.56■■■□□ 2.16
VEGFA-226ENST00000611736 TRAK2O60296 914 aa28.56■■■□□ 2.16
VEGFA-226ENST00000611736 RECQL4O94761 1208 aa28.56■■■□□ 2.16
VEGFA-226ENST00000611736 GALTP07902 379 aa28.56■■■□□ 2.16
VEGFA-226ENST00000611736 SLC11A1P49279 550 aa28.56■■■□□ 2.16
VEGFA-226ENST00000611736 KRT17Q04695 432 aa28.56■■■□□ 2.16
VEGFA-226ENST00000611736 ZBTB33Q86T24 672 aa28.56■■■□□ 2.16
VEGFA-226ENST00000611736 TMEM173Q86WV6 379 aaPredicted RBP28.56■■■□□ 2.16
VEGFA-226ENST00000611736 FAM178BQ8IXR5 827 aa28.56■■■□□ 2.16
VEGFA-226ENST00000611736 LEO1Q8WVC0 666 aaPredicted RBP28.56■■■□□ 2.16
VEGFA-226ENST00000611736 SPATA32Q96LK8 384 aa28.56■■■□□ 2.16
VEGFA-226ENST00000611736 CDT1Q9H211 546 aa28.56■■■□□ 2.16
VEGFA-226ENST00000611736 TLR9Q9NR96 1032 aa28.56■■■□□ 2.16
VEGFA-226ENST00000611736 PUF60Q9UHX1 559 aaKnown RBP28.56■■■□□ 2.16
VEGFA-226ENST00000611736 E2F4Q16254 413 aa28.55■■■□□ 2.16
VEGFA-226ENST00000611736 MICAL1Q8TDZ2 1067 aa28.55■■■□□ 2.16
VEGFA-226ENST00000611736 STAMQ92783 540 aa28.55■■■□□ 2.16
VEGFA-226ENST00000611736 BICD1Q96G01 975 aa28.55■■■□□ 2.16
VEGFA-226ENST00000611736 RPS6KC1Q96S38 1066 aa28.55■■■□□ 2.16
VEGFA-226ENST00000611736 TCHPQ9BT92 498 aa28.55■■■□□ 2.16
VEGFA-226ENST00000611736 PTPRHQ9HD43 1115 aa28.55■■■□□ 2.16
VEGFA-226ENST00000611736 LZTS1Q9Y250 596 aa28.55■■■□□ 2.16
VEGFA-226ENST00000611736 HARSP12081 509 aaKnown RBP28.54■■■□□ 2.16
VEGFA-226ENST00000611736 NMT1P30419 496 aaKnown RBP28.54■■■□□ 2.16
VEGFA-226ENST00000611736 ERVFC1P60507 584 aa28.54■■■□□ 2.16
VEGFA-226ENST00000611736 RESP18Q5W5W9 173 aa28.54■■■□□ 2.16
VEGFA-226ENST00000611736 SFR1Q86XK3 245 aa28.54■■■□□ 2.16
VEGFA-226ENST00000611736 GSTCDQ8NEC7 633 aa28.54■■■□□ 2.16
VEGFA-226ENST00000611736 DNAJC19Q96DA6 116 aa28.54■■■□□ 2.16
VEGFA-226ENST00000611736 TMEM169Q96HH4 297 aa28.54■■■□□ 2.16
VEGFA-226ENST00000611736 ZBTB45Q96K62 511 aaPredicted RBP28.54■■■□□ 2.16
VEGFA-226ENST00000611736 FAM13BQ9NYF5 915 aa28.54■■■□□ 2.16
VEGFA-226ENST00000611736 ANKFY1Q9P2R3 1169 aa28.54■■■□□ 2.16
VEGFA-226ENST00000611736 VCANP13611 3396 aa28.53■■■□□ 2.16
VEGFA-226ENST00000611736 ZMYM2Q9UBW7 1377 aa28.53■■■□□ 2.16
VEGFA-226ENST00000611736 MPZL3Q6UWV2 235 aa28.53■■■□□ 2.16
VEGFA-226ENST00000611736 CEP120Q8N960 986 aa28.53■■■□□ 2.16
VEGFA-226ENST00000611736 IQUBQ8NA54 791 aa28.53■■■□□ 2.16
VEGFA-226ENST00000611736 BCL7CQ8WUZ0 217 aaPredicted RBP28.53■■■□□ 2.16
VEGFA-226ENST00000611736 HLA-CQ95604 372 aa28.53■■■□□ 2.16
VEGFA-226ENST00000611736 IGSF21Q96ID5 467 aa28.53■■■□□ 2.16
VEGFA-226ENST00000611736 FIZ1Q96SL8 496 aa28.53■■■□□ 2.16
VEGFA-226ENST00000611736 TMEM175Q9BSA9 504 aa28.53■■■□□ 2.16
VEGFA-226ENST00000611736 TBX20Q9UMR3 447 aa28.53■■■□□ 2.16
VEGFA-226ENST00000611736 TRIP11Q15643 1979 aa28.52■■■□□ 2.16
VEGFA-226ENST00000611736 CARNS1A5YM72 827 aa28.52■■■□□ 2.16
VEGFA-226ENST00000611736 POLR2DO15514 142 aaKnown RBP28.52■■■□□ 2.16
VEGFA-226ENST00000611736 IDEP14735 1019 aa28.52■■■□□ 2.16
VEGFA-226ENST00000611736 PROZP22891 400 aa28.52■■■□□ 2.16
VEGFA-226ENST00000611736 OSTNP61366 133 aa28.52■■■□□ 2.16
VEGFA-226ENST00000611736 TFF2Q03403 129 aa28.52■■■□□ 2.16
VEGFA-226ENST00000611736 PLPP4Q5VZY2 271 aa28.52■■■□□ 2.16
VEGFA-226ENST00000611736 ADGRD2Q7Z7M1 963 aa28.52■■■□□ 2.16
VEGFA-226ENST00000611736 COLGALT2Q8IYK4 626 aa28.52■■■□□ 2.16
VEGFA-226ENST00000611736 TCF25Q9BQ70 676 aa28.52■■■□□ 2.16
VEGFA-226ENST00000611736 CXCL16Q9H2A7 254 aa28.52■■■□□ 2.16
VEGFA-226ENST00000611736 CUEDC2Q9H467 287 aa28.52■■■□□ 2.16
VEGFA-226ENST00000611736 ENTPD7Q9NQZ7 604 aa28.52■■■□□ 2.16
VEGFA-226ENST00000611736 FAN1Q9Y2M0 1017 aa28.52■■■□□ 2.16
VEGFA-226ENST00000611736 PRG3Q9Y2Y8 225 aaPredicted RBP28.52■■■□□ 2.16
VEGFA-226ENST00000611736 ABLIM1O14639 778 aa28.51■■■□□ 2.15
VEGFA-226ENST00000611736 TOM1L1O75674 476 aa28.51■■■□□ 2.15
VEGFA-226ENST00000611736 ALDH2P05091 517 aa28.51■■■□□ 2.15
VEGFA-226ENST00000611736 MCF2P10911 925 aa28.51■■■□□ 2.15
VEGFA-226ENST00000611736 MATR3P43243 847 aaKnown RBP eCLIP28.51■■■□□ 2.15
VEGFA-226ENST00000611736 OR1G1P47890 313 aa28.51■■■□□ 2.15
VEGFA-226ENST00000611736 DSC1Q08554 894 aa28.51■■■□□ 2.15
VEGFA-226ENST00000611736 HYAL1Q12794 435 aa28.51■■■□□ 2.15
VEGFA-226ENST00000611736 GRIK3Q13003 919 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms