RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 GCNT4Q9P109 453 aa20.52■□□□□ 0.88
SEMA3B-210ENST00000611067 GTPBP10A4D1E9 387 aaKnown RBP20.51■□□□□ 0.87
SEMA3B-210ENST00000611067 FAM86B1E9PN63 330 aa20.51■□□□□ 0.87
SEMA3B-210ENST00000611067 PDXKO00764 312 aa20.51■□□□□ 0.87
SEMA3B-210ENST00000611067 AKAP3O75969 853 aa20.51■□□□□ 0.87
SEMA3B-210ENST00000611067 VIMP08670 466 aaKnown RBP20.51■□□□□ 0.87
SEMA3B-210ENST00000611067 FAM86B2P0C5J1 330 aa20.51■□□□□ 0.87
SEMA3B-210ENST00000611067 ALAS1P13196 640 aa20.51■□□□□ 0.87
SEMA3B-210ENST00000611067 EPHX2P34913 555 aa20.51■□□□□ 0.87
SEMA3B-210ENST00000611067 STAT1P42224 750 aa20.51■□□□□ 0.87
SEMA3B-210ENST00000611067 MYO1EQ12965 1108 aa20.51■□□□□ 0.87
SEMA3B-210ENST00000611067 MAPK7Q13164 816 aa20.51■□□□□ 0.87
SEMA3B-210ENST00000611067 FAM133BQ5BKY9 247 aaKnown RBP20.51■□□□□ 0.87
SEMA3B-210ENST00000611067 MCF2L2Q86YR7 1114 aa20.51■□□□□ 0.87
SEMA3B-210ENST00000611067 GLG1Q92896 1179 aa20.51■□□□□ 0.87
SEMA3B-210ENST00000611067 RAVER2Q9HCJ3 691 aaKnown RBP20.51■□□□□ 0.87
SEMA3B-210ENST00000611067 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.51■□□□□ 0.87
SEMA3B-210ENST00000611067 RPTORQ8N122 1335 aa20.51■□□□□ 0.87
SEMA3B-210ENST00000611067 NEBLO76041 1014 aa20.51■□□□□ 0.87
SEMA3B-210ENST00000611067 ANP32DO95626 131 aa20.51■□□□□ 0.87
SEMA3B-210ENST00000611067 SLMAPQ14BN4 828 aa20.51■□□□□ 0.87
SEMA3B-210ENST00000611067 TNFAIP8L3Q5GJ75 292 aa20.51■□□□□ 0.87
SEMA3B-210ENST00000611067 TCERG1LQ5VWI1 586 aa20.51■□□□□ 0.87
SEMA3B-210ENST00000611067 EPM2AIP1Q7L775 607 aaPredicted RBP20.51■□□□□ 0.87
SEMA3B-210ENST00000611067 OLIG1Q8TAK6 271 aa20.51■□□□□ 0.87
SEMA3B-210ENST00000611067 STMN4Q9H169 189 aaPredicted RBP20.51■□□□□ 0.87
SEMA3B-210ENST00000611067 SNX24Q9Y343 169 aa20.51■□□□□ 0.87
SEMA3B-210ENST00000611067 CSADQ9Y600 493 aa20.51■□□□□ 0.87
SEMA3B-210ENST00000611067 EVI5O60447 810 aa20.5■□□□□ 0.87
SEMA3B-210ENST00000611067 VGLL4Q14135 290 aa20.5■□□□□ 0.87
SEMA3B-210ENST00000611067 DLK2Q6UY11 383 aa20.5■□□□□ 0.87
SEMA3B-210ENST00000611067 ETNPPLQ8TBG4 499 aa20.5■□□□□ 0.87
SEMA3B-210ENST00000611067 SLC35C1Q96A29 364 aa20.5■□□□□ 0.87
SEMA3B-210ENST00000611067 ABCF3Q9NUQ8 709 aa20.5■□□□□ 0.87
SEMA3B-210ENST00000611067 AGAP1Q9UPQ3 857 aa20.5■□□□□ 0.87
SEMA3B-210ENST00000611067 SLC16A3O15427 465 aaKnown RBP20.5■□□□□ 0.87
SEMA3B-210ENST00000611067 SNX3O60493 162 aa20.5■□□□□ 0.87
SEMA3B-210ENST00000611067 ECM2O94769 699 aaPredicted RBP20.5■□□□□ 0.87
SEMA3B-210ENST00000611067 NQO1P15559 274 aaKnown RBP20.5■□□□□ 0.87
SEMA3B-210ENST00000611067 GBP1P32455 592 aa20.5■□□□□ 0.87
SEMA3B-210ENST00000611067 HOXD13P35453 343 aa20.5■□□□□ 0.87
SEMA3B-210ENST00000611067 COPB2P35606 906 aa20.5■□□□□ 0.87
SEMA3B-210ENST00000611067 PDE6CP51160 858 aa20.5■□□□□ 0.87
SEMA3B-210ENST00000611067 GJB7Q6PEY0 223 aa20.5■□□□□ 0.87
SEMA3B-210ENST00000611067 ADAT2Q7Z6V5 191 aaKnown RBP20.5■□□□□ 0.87
SEMA3B-210ENST00000611067 CTNNBL1Q8WYA6 563 aaPredicted RBP20.5■□□□□ 0.87
SEMA3B-210ENST00000611067 FAM20AQ96MK3 541 aa20.5■□□□□ 0.87
SEMA3B-210ENST00000611067 UIMC1Q96RL1 719 aa20.5■□□□□ 0.87
SEMA3B-210ENST00000611067 GRHL1Q9NZI5 618 aa20.5■□□□□ 0.87
SEMA3B-210ENST00000611067 AFG3L2Q9Y4W6 797 aa20.5■□□□□ 0.87
SEMA3B-210ENST00000611067 PARP14Q460N5 1801 aa20.49■□□□□ 0.87
SEMA3B-210ENST00000611067 SMIM23A6NLE4 172 aa20.49■□□□□ 0.87
SEMA3B-210ENST00000611067 VWA5AO00534 786 aa20.49■□□□□ 0.87
SEMA3B-210ENST00000611067 IREB2P48200 963 aaKnown RBP20.49■□□□□ 0.87
SEMA3B-210ENST00000611067 SF3A3Q12874 501 aaKnown RBP eCLIP20.49■□□□□ 0.876e-7■■□□□ 11.8
SEMA3B-210ENST00000611067 KIRREL3Q8IZU9 778 aa20.49■□□□□ 0.87
SEMA3B-210ENST00000611067 AGAP11Q8TF27 550 aa20.49■□□□□ 0.87
SEMA3B-210ENST00000611067 ZC3H15Q8WU90 426 aaKnown RBP20.49■□□□□ 0.87
SEMA3B-210ENST00000611067 LENG9Q96B70 501 aa20.49■□□□□ 0.87
SEMA3B-210ENST00000611067 ATG4CQ96DT6 458 aa20.49■□□□□ 0.87
SEMA3B-210ENST00000611067 HOMER2Q9NSB8 354 aa20.49■□□□□ 0.87
SEMA3B-210ENST00000611067 L3MBTL1Q9Y468 752 aa20.49■□□□□ 0.87
SEMA3B-210ENST00000611067 NFIBO00712 420 aa20.48■□□□□ 0.87
SEMA3B-210ENST00000611067 PPP1R12AO14974 1030 aaPredicted RBP20.48■□□□□ 0.87
SEMA3B-210ENST00000611067 GRIN3BO60391 1043 aa20.48■□□□□ 0.87
SEMA3B-210ENST00000611067 OAS1P00973 400 aaKnown RBP20.48■□□□□ 0.87
SEMA3B-210ENST00000611067 RARAP10276 462 aa20.48■□□□□ 0.87
SEMA3B-210ENST00000611067 RPL13P26373 211 aaKnown RBP20.48■□□□□ 0.87
SEMA3B-210ENST00000611067 HSD17B4P51659 736 aa20.48■□□□□ 0.87
SEMA3B-210ENST00000611067 ZNF131P52739 623 aa20.48■□□□□ 0.87
SEMA3B-210ENST00000611067 NCALDP61601 193 aa20.48■□□□□ 0.87
SEMA3B-210ENST00000611067 SATB1Q01826 763 aa20.48■□□□□ 0.87
SEMA3B-210ENST00000611067 GIT2Q14161 759 aa20.48■□□□□ 0.87
SEMA3B-210ENST00000611067 CNGA2Q16280 664 aa20.48■□□□□ 0.87
SEMA3B-210ENST00000611067 TAOK1Q7L7X3 1001 aa20.48■□□□□ 0.87
SEMA3B-210ENST00000611067 GLYCTKQ8IVS8 523 aa20.48■□□□□ 0.87
SEMA3B-210ENST00000611067 THOC1Q96FV9 657 aaKnown RBP20.48■□□□□ 0.87
SEMA3B-210ENST00000611067 SEMA4AQ9H3S1 761 aa20.48■□□□□ 0.87
SEMA3B-210ENST00000611067 TYW1Q9NV66 732 aaKnown RBP20.48■□□□□ 0.87
SEMA3B-210ENST00000611067 NOP53Q9NZM5 478 aaKnown RBP20.48■□□□□ 0.87
SEMA3B-210ENST00000611067 MTRF1LQ9UGC7 380 aaKnown RBP20.48■□□□□ 0.87
SEMA3B-210ENST00000611067 PARP2Q9UGN5 583 aa20.48■□□□□ 0.87
SEMA3B-210ENST00000611067 SNCAIPQ9Y6H5 919 aa20.48■□□□□ 0.87
SEMA3B-210ENST00000611067 IGSF9BQ9UPX0 1349 aa20.48■□□□□ 0.87
SEMA3B-210ENST00000611067 GLTPD2A6NH11 291 aa20.48■□□□□ 0.87
SEMA3B-210ENST00000611067 MED24O75448 989 aa20.48■□□□□ 0.87
SEMA3B-210ENST00000611067 UBOX5O94941 541 aa20.48■□□□□ 0.87
SEMA3B-210ENST00000611067 SOX5P35711 763 aa20.48■□□□□ 0.87
SEMA3B-210ENST00000611067 PTGIRP43119 386 aa20.48■□□□□ 0.87
SEMA3B-210ENST00000611067 RABGAP1Q9Y3P9 1069 aa20.48■□□□□ 0.87
SEMA3B-210ENST00000611067 PHF2O75151 1096 aa20.47■□□□□ 0.87
SEMA3B-210ENST00000611067 NR3C1P04150 777 aa20.47■□□□□ 0.87
SEMA3B-210ENST00000611067 UBXN2AP68543 259 aa20.47■□□□□ 0.87
SEMA3B-210ENST00000611067 GALNTL6Q49A17 601 aa20.47■□□□□ 0.87
SEMA3B-210ENST00000611067 SFR1Q86XK3 245 aa20.47■□□□□ 0.87
SEMA3B-210ENST00000611067 GBP7Q8N8V2 638 aaPredicted RBP20.47■□□□□ 0.87
SEMA3B-210ENST00000611067 CLEC4DQ8WXI8 215 aa20.47■□□□□ 0.87
SEMA3B-210ENST00000611067 PODXLO00592 558 aa20.47■□□□□ 0.87
SEMA3B-210ENST00000611067 MSH4O15457 936 aa20.47■□□□□ 0.87
SEMA3B-210ENST00000611067 MYCNP04198 464 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms