RNA–Protein interactions for RNA: ENST00000611010.4

FDPS-220, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5 BASIC

Gene FDPS, Length 1,196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-220ENST00000611010 EPG5Q9HCE0 2579 aa13.16□□□□□ -0.3
FDPS-220ENST00000611010 TGM5O43548 720 aa13.16□□□□□ -0.3
FDPS-220ENST00000611010 DTNBO60941 627 aa13.16□□□□□ -0.3
FDPS-220ENST00000611010 ALDH2P05091 517 aa13.16□□□□□ -0.3
FDPS-220ENST00000611010 SP9P0CG40 484 aa13.16□□□□□ -0.3
FDPS-220ENST00000611010 SRGAP2CP0DJJ0 459 aa13.16□□□□□ -0.3
FDPS-220ENST00000611010 LAMP2P13473 410 aa13.16□□□□□ -0.3
FDPS-220ENST00000611010 HSPA4P34932 840 aa13.16□□□□□ -0.3
FDPS-220ENST00000611010 OR1G1P47890 313 aa13.16□□□□□ -0.3
FDPS-220ENST00000611010 NLRP5P59047 1200 aa13.16□□□□□ -0.3
FDPS-220ENST00000611010 SPIRE1Q08AE8 756 aa13.16□□□□□ -0.3
FDPS-220ENST00000611010 EMC2Q15006 297 aa13.16□□□□□ -0.3
FDPS-220ENST00000611010 NFKBIBQ15653 356 aa13.16□□□□□ -0.3
FDPS-220ENST00000611010 INF2Q27J81 1249 aa13.16□□□□□ -0.3
FDPS-220ENST00000611010 MOXD1Q6UVY6 613 aa13.16□□□□□ -0.3
FDPS-220ENST00000611010 SRGAP1Q7Z6B7 1085 aa13.16□□□□□ -0.3
FDPS-220ENST00000611010 FERMT3Q86UX7 667 aa13.16□□□□□ -0.3
FDPS-220ENST00000611010 SUMF1Q8NBK3 374 aa13.16□□□□□ -0.3
FDPS-220ENST00000611010 PJA1Q8NG27 643 aa13.16□□□□□ -0.3
FDPS-220ENST00000611010 RABGGTAQ92696 567 aa13.16□□□□□ -0.3
FDPS-220ENST00000611010 HAS1Q92839 578 aa13.16□□□□□ -0.3
FDPS-220ENST00000611010 FGF14Q92915 247 aa13.16□□□□□ -0.3
FDPS-220ENST00000611010 KIF2CQ99661 725 aa13.16□□□□□ -0.3
FDPS-220ENST00000611010 NT5C3AQ9H0P0 336 aa13.16□□□□□ -0.3
FDPS-220ENST00000611010 DDX25Q9UHL0 483 aaKnown RBP13.16□□□□□ -0.3
FDPS-220ENST00000611010 CACNA1BQ00975 2339 aa13.16□□□□□ -0.3
FDPS-220ENST00000611010 K7ELQ4 463 aaPredicted RBP13.15□□□□□ -0.3
FDPS-220ENST00000611010 QARSP47897 775 aaKnown RBP13.15□□□□□ -0.3
FDPS-220ENST00000611010 NTHL1P78549 312 aa13.15□□□□□ -0.3
FDPS-220ENST00000611010 FGD1P98174 961 aa13.15□□□□□ -0.3
FDPS-220ENST00000611010 PHLDB3Q6NSJ2 640 aa13.15□□□□□ -0.3
FDPS-220ENST00000611010 FUT10Q6P4F1 479 aa13.15□□□□□ -0.3
FDPS-220ENST00000611010 BLOC1S2Q6QNY1 142 aa13.15□□□□□ -0.3
FDPS-220ENST00000611010 PALB2Q86YC2 1186 aa13.15□□□□□ -0.3
FDPS-220ENST00000611010 BLIDQ8IZY5 108 aa13.15□□□□□ -0.3
FDPS-220ENST00000611010 RNF149Q8NC42 400 aa13.15□□□□□ -0.3
FDPS-220ENST00000611010 PSPC1Q8WXF1 523 aaKnown RBP13.15□□□□□ -0.3
FDPS-220ENST00000611010 CEP170P1Q96L14 293 aa13.15□□□□□ -0.3
FDPS-220ENST00000611010 FAM193BQ96PV7 902 aaPredicted RBP13.15□□□□□ -0.3
FDPS-220ENST00000611010 PAAF1Q9BRP4 392 aa13.15□□□□□ -0.3
FDPS-220ENST00000611010 LXNQ9BS40 222 aa13.15□□□□□ -0.3
FDPS-220ENST00000611010 CXCL16Q9H2A7 254 aa13.15□□□□□ -0.3
FDPS-220ENST00000611010 SLC2A4RGQ9NR83 387 aa13.15□□□□□ -0.3
FDPS-220ENST00000611010 RGL1Q9NZL6 768 aa13.15□□□□□ -0.3
FDPS-220ENST00000611010 STK39Q9UEW8 545 aa13.15□□□□□ -0.3
FDPS-220ENST00000611010 SPTBN2O15020 2390 aa13.15□□□□□ -0.3
FDPS-220ENST00000611010 TICRRQ7Z2Z1 1910 aa13.14□□□□□ -0.31
FDPS-220ENST00000611010 B4GALT5O43286 388 aa13.14□□□□□ -0.31
FDPS-220ENST00000611010 ITGA4P13612 1032 aa13.14□□□□□ -0.31
FDPS-220ENST00000611010 AKAP17AQ02040 695 aaKnown RBP13.14□□□□□ -0.31
FDPS-220ENST00000611010 MBTD1Q05BQ5 628 aa13.14□□□□□ -0.31
FDPS-220ENST00000611010 CAPSQ13938 189 aa13.14□□□□□ -0.31
FDPS-220ENST00000611010 EARS2Q5JPH6 523 aaKnown RBP13.14□□□□□ -0.31
FDPS-220ENST00000611010 RTP2Q5QGT7 225 aa13.14□□□□□ -0.31
FDPS-220ENST00000611010 POTEHQ6S545 545 aa13.14□□□□□ -0.31
FDPS-220ENST00000611010 PRSS55Q6UWB4 352 aaPredicted RBP13.14□□□□□ -0.31
FDPS-220ENST00000611010 PARM1Q6UWI2 310 aa13.14□□□□□ -0.31
FDPS-220ENST00000611010 CYP26C1Q6V0L0 522 aa13.14□□□□□ -0.31
FDPS-220ENST00000611010 CDR2LQ86X02 465 aaPredicted RBP13.14□□□□□ -0.31
FDPS-220ENST00000611010 KCNG4Q8TDN1 519 aa13.14□□□□□ -0.31
FDPS-220ENST00000611010 ASAP3Q8TDY4 903 aa13.14□□□□□ -0.31
FDPS-220ENST00000611010 SLC7A3Q8WY07 619 aa13.14□□□□□ -0.31
FDPS-220ENST00000611010 APOL6Q9BWW8 343 aa13.14□□□□□ -0.31
FDPS-220ENST00000611010 PRKD2Q9BZL6 878 aa13.14□□□□□ -0.31
FDPS-220ENST00000611010 GJB4Q9NTQ9 266 aa13.14□□□□□ -0.31
FDPS-220ENST00000611010 DLL3Q9NYJ7 618 aa13.14□□□□□ -0.31
FDPS-220ENST00000611010 KANSL3Q9P2N6 904 aa13.14□□□□□ -0.31
FDPS-220ENST00000611010 KCNJ14Q9UNX9 436 aa13.14□□□□□ -0.31
FDPS-220ENST00000611010 FAM205CA6NFA0 338 aa13.13□□□□□ -0.31
FDPS-220ENST00000611010 STK25O00506 426 aa13.13□□□□□ -0.31
FDPS-220ENST00000611010 ARF4P18085 180 aaPredicted RBP13.13□□□□□ -0.31
FDPS-220ENST00000611010 AKAP5P24588 427 aa13.13□□□□□ -0.31
FDPS-220ENST00000611010 YWHABP31946 246 aaKnown RBP13.13□□□□□ -0.31
FDPS-220ENST00000611010 RFC5P40937 340 aa13.13□□□□□ -0.31
FDPS-220ENST00000611010 ANAPC15P60006 121 aa13.13□□□□□ -0.31
FDPS-220ENST00000611010 PTENP60484 403 aa13.13□□□□□ -0.31
FDPS-220ENST00000611010 NONOQ15233 471 aaKnown RBP eCLIP13.13□□□□□ -0.31
FDPS-220ENST00000611010 DCLRE1AQ6PJP8 1040 aa13.13□□□□□ -0.31
FDPS-220ENST00000611010 DGLUCYQ7Z3D6 616 aa13.13□□□□□ -0.31
FDPS-220ENST00000611010 IFNLR1Q8IU57 520 aaPredicted RBP13.13□□□□□ -0.31
FDPS-220ENST00000611010 C1orf210Q8IVY1 113 aa13.13□□□□□ -0.31
FDPS-220ENST00000611010 C4orf19Q8IY42 314 aa13.13□□□□□ -0.31
FDPS-220ENST00000611010 HDAC7Q8WUI4 952 aa13.13□□□□□ -0.31
FDPS-220ENST00000611010 STAMQ92783 540 aa13.13□□□□□ -0.31
FDPS-220ENST00000611010 DYDC2Q96IM9 177 aa13.13□□□□□ -0.31
FDPS-220ENST00000611010 JPH2Q9BR39 696 aaPredicted RBP13.13□□□□□ -0.31
FDPS-220ENST00000611010 LARP6Q9BRS8 491 aaKnown RBP13.13□□□□□ -0.31
FDPS-220ENST00000611010 DDX23Q9BUQ8 820 aaKnown RBP13.13□□□□□ -0.31
FDPS-220ENST00000611010 CSRNP2Q9H175 543 aa13.13□□□□□ -0.31
FDPS-220ENST00000611010 SEMA4AQ9H3S1 761 aa13.13□□□□□ -0.31
FDPS-220ENST00000611010 ZDHHC7Q9NXF8 308 aa13.13□□□□□ -0.31
FDPS-220ENST00000611010 FNIP2Q9P278 1114 aa13.13□□□□□ -0.31
FDPS-220ENST00000611010 FBXW11Q9UKB1 542 aa13.13□□□□□ -0.31
FDPS-220ENST00000611010 SIT1Q9Y3P8 196 aa13.13□□□□□ -0.31
FDPS-220ENST00000611010 MTF2Q9Y483 593 aaPredicted RBP13.13□□□□□ -0.31
FDPS-220ENST00000611010 PDCD11Q14690 1871 aaKnown RBP13.12□□□□□ -0.31
FDPS-220ENST00000611010 SHISA7A6NL88 538 aa13.12□□□□□ -0.31
FDPS-220ENST00000611010 ADAM12O43184 909 aa13.12□□□□□ -0.31
FDPS-220ENST00000611010 ZMYND10O75800 440 aa13.12□□□□□ -0.31
FDPS-220ENST00000611010 P4HBP07237 508 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms