RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 CNGA2Q16280 664 aa21.89■■□□□ 1.09
SSBP3-216ENST00000610401 GRIPAP1Q4V328 841 aa21.89■■□□□ 1.09
SSBP3-216ENST00000610401 C6orf118Q5T5N4 469 aa21.89■■□□□ 1.09
SSBP3-216ENST00000610401 CRAMP1Q96RY5 1269 aa21.89■■□□□ 1.09
SSBP3-216ENST00000610401 CSRNP1Q96S65 589 aa21.89■■□□□ 1.09
SSBP3-216ENST00000610401 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.89■■□□□ 1.09
SSBP3-216ENST00000610401 ERFP50548 548 aa21.89■■□□□ 1.09
SSBP3-216ENST00000610401 PADI6Q6TGC4 694 aa21.89■■□□□ 1.09
SSBP3-216ENST00000610401 HAUS1Q96CS2 278 aa21.89■■□□□ 1.09
SSBP3-216ENST00000610401 HERPUD2Q9BSE4 406 aa21.89■■□□□ 1.09
SSBP3-216ENST00000610401 TXLNGYQ9BZA5 131 aa21.89■■□□□ 1.09
SSBP3-216ENST00000610401 PI4KBQ9UBF8 816 aa21.89■■□□□ 1.09
SSBP3-216ENST00000610401 ANAPC7Q9UJX3 599 aa21.89■■□□□ 1.09
SSBP3-216ENST00000610401 ECEL1O95672 775 aa21.88■■□□□ 1.09
SSBP3-216ENST00000610401 BRAFP15056 766 aa21.88■■□□□ 1.09
SSBP3-216ENST00000610401 PEX19P40855 299 aa21.88■■□□□ 1.09
SSBP3-216ENST00000610401 ALDH5A1P51649 535 aaPredicted RBP21.88■■□□□ 1.09
SSBP3-216ENST00000610401 NPEPPSP55786 919 aa21.88■■□□□ 1.09
SSBP3-216ENST00000610401 Q4G0T1 1027 aa21.88■■□□□ 1.09
SSBP3-216ENST00000610401 SLC13A5Q86YT5 568 aaPredicted RBP21.88■■□□□ 1.09
SSBP3-216ENST00000610401 MTUS1Q9ULD2 1270 aa21.88■■□□□ 1.09
SSBP3-216ENST00000610401 ATXN2Q99700 1313 aaKnown RBP21.88■■□□□ 1.09
SSBP3-216ENST00000610401 C5orf60A6NFR6 353 aa21.88■■□□□ 1.09
SSBP3-216ENST00000610401 CHRNA3P32297 505 aa21.88■■□□□ 1.09
SSBP3-216ENST00000610401 DGKZQ13574 1117 aa21.88■■□□□ 1.09
SSBP3-216ENST00000610401 PLA2G4FQ68DD2 849 aa21.88■■□□□ 1.09
SSBP3-216ENST00000610401 ACSF2Q96CM8 615 aaPredicted RBP21.88■■□□□ 1.09
SSBP3-216ENST00000610401 FIZ1Q96SL8 496 aa21.88■■□□□ 1.09
SSBP3-216ENST00000610401 OLFML3Q9NRN5 406 aa21.88■■□□□ 1.09
SSBP3-216ENST00000610401 SYNGAP1Q96PV0 1343 aa21.88■■□□□ 1.09
SSBP3-216ENST00000610401 ANP32DO95626 131 aa21.87■■□□□ 1.09
SSBP3-216ENST00000610401 CHRNB2P17787 502 aa21.87■■□□□ 1.09
SSBP3-216ENST00000610401 TRIM68Q6AZZ1 485 aa21.87■■□□□ 1.09
SSBP3-216ENST00000610401 DAW1Q8N136 415 aa21.87■■□□□ 1.09
SSBP3-216ENST00000610401 C1orf131Q8NDD1 294 aaKnown RBP21.87■■□□□ 1.09
SSBP3-216ENST00000610401 SEMA4DQ92854 862 aa21.87■■□□□ 1.09
SSBP3-216ENST00000610401 SLC5A5Q92911 643 aa21.87■■□□□ 1.09
SSBP3-216ENST00000610401 IGLV3-22A0A075B6J6 115 aa21.87■■□□□ 1.09
SSBP3-216ENST00000610401 STX2P32856 288 aa21.87■■□□□ 1.09
SSBP3-216ENST00000610401 MXI1P50539 228 aa21.87■■□□□ 1.09
SSBP3-216ENST00000610401 DHX34Q14147 1143 aaKnown RBP21.87■■□□□ 1.09
SSBP3-216ENST00000610401 CDAN1Q8IWY9 1227 aa21.87■■□□□ 1.09
SSBP3-216ENST00000610401 SEC14L1Q92503 715 aa21.87■■□□□ 1.09
SSBP3-216ENST00000610401 RMDN2Q96LZ7 410 aa21.87■■□□□ 1.09
SSBP3-216ENST00000610401 R3HDM2Q9Y2K5 976 aaKnown RBP21.87■■□□□ 1.09
SSBP3-216ENST00000610401 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.87■■□□□ 1.09
SSBP3-216ENST00000610401 POC1B-GALNT4F8VUJ3 575 aa21.87■■□□□ 1.09
SSBP3-216ENST00000610401 IPO5O00410 1097 aaKnown RBP21.87■■□□□ 1.09
SSBP3-216ENST00000610401 KRT16P08779 473 aa21.87■■□□□ 1.09
SSBP3-216ENST00000610401 GAP43P17677 238 aa21.87■■□□□ 1.09
SSBP3-216ENST00000610401 PSMC4P43686 418 aa21.87■■□□□ 1.09
SSBP3-216ENST00000610401 ADCY2Q08462 1091 aa21.87■■□□□ 1.09
SSBP3-216ENST00000610401 CETN1Q12798 172 aa21.87■■□□□ 1.09
SSBP3-216ENST00000610401 XRCC4Q13426 336 aa21.87■■□□□ 1.09
SSBP3-216ENST00000610401 FAM102BQ5T8I3 360 aa21.87■■□□□ 1.09
SSBP3-216ENST00000610401 WDR11Q9BZH6 1224 aa21.87■■□□□ 1.09
SSBP3-216ENST00000610401 COA1Q9GZY4 146 aa21.87■■□□□ 1.09
SSBP3-216ENST00000610401 TAOK3Q9H2K8 898 aa21.87■■□□□ 1.09
SSBP3-216ENST00000610401 KDM4CQ9H3R0 1056 aa21.87■■□□□ 1.09
SSBP3-216ENST00000610401 RREB1Q92766 1687 aa21.87■■□□□ 1.09
SSBP3-216ENST00000610401 FAM187AA6NFU0 413 aa21.86■■□□□ 1.09
SSBP3-216ENST00000610401 PI4K2BG5E9Z4 385 aa21.86■■□□□ 1.09
SSBP3-216ENST00000610401 ITGA8P53708 1063 aa21.86■■□□□ 1.09
SSBP3-216ENST00000610401 DRP2Q13474 957 aa21.86■■□□□ 1.09
SSBP3-216ENST00000610401 PLCB4Q15147 1175 aa21.86■■□□□ 1.09
SSBP3-216ENST00000610401 TMED2Q15363 201 aa21.86■■□□□ 1.09
SSBP3-216ENST00000610401 GSTA5Q7RTV2 222 aa21.86■■□□□ 1.09
SSBP3-216ENST00000610401 RHOT2Q8IXI1 618 aa21.86■■□□□ 1.09
SSBP3-216ENST00000610401 CRYGNQ8WXF5 182 aa21.86■■□□□ 1.09
SSBP3-216ENST00000610401 TMEM237Q96Q45 408 aa21.86■■□□□ 1.09
SSBP3-216ENST00000610401 KIF9Q9HAQ2 790 aa21.86■■□□□ 1.09
SSBP3-216ENST00000610401 INTUQ9ULD6 942 aa21.86■■□□□ 1.09
SSBP3-216ENST00000610401 NCANO14594 1321 aa21.86■■□□□ 1.09
SSBP3-216ENST00000610401 PAEPP09466 180 aa21.86■■□□□ 1.09
SSBP3-216ENST00000610401 PRELPP51888 382 aa21.86■■□□□ 1.09
SSBP3-216ENST00000610401 FOXR2Q6PJQ5 311 aa21.86■■□□□ 1.09
SSBP3-216ENST00000610401 CCDC17Q96LX7 622 aa21.86■■□□□ 1.09
SSBP3-216ENST00000610401 KREMEN1Q96MU8 473 aa21.86■■□□□ 1.09
SSBP3-216ENST00000610401 PASKQ96RG2 1323 aa21.86■■□□□ 1.09
SSBP3-216ENST00000610401 WDR91A4D1P6 747 aa21.85■■□□□ 1.09
SSBP3-216ENST00000610401 H0Y3Z8 333 aa21.85■■□□□ 1.09
SSBP3-216ENST00000610401 CETPP11597 493 aa21.85■■□□□ 1.09
SSBP3-216ENST00000610401 ZNF449Q6P9G9 518 aa21.85■■□□□ 1.09
SSBP3-216ENST00000610401 EPS8L1Q8TE68 723 aa21.85■■□□□ 1.09
SSBP3-216ENST00000610401 DCAF4Q8WV16 495 aa21.85■■□□□ 1.09
SSBP3-216ENST00000610401 TGS1Q96RS0 853 aaKnown RBP21.85■■□□□ 1.09
SSBP3-216ENST00000610401 HSPBP1Q9NZL4 362 aa21.85■■□□□ 1.09
SSBP3-216ENST00000610401 COL14A1Q05707 1796 aaKnown RBP21.85■■□□□ 1.09
SSBP3-216ENST00000610401 NUDT17P0C025 328 aa21.85■■□□□ 1.09
SSBP3-216ENST00000610401 NT5C2P49902 561 aa21.85■■□□□ 1.09
SSBP3-216ENST00000610401 STAT2P52630 851 aa21.85■■□□□ 1.09
SSBP3-216ENST00000610401 PGM2Q96G03 612 aa21.85■■□□□ 1.09
SSBP3-216ENST00000610401 GLIS2Q9BZE0 524 aaPredicted RBP21.85■■□□□ 1.09
SSBP3-216ENST00000610401 GOLGA8SH3BPF8 625 aa21.85■■□□□ 1.09
SSBP3-216ENST00000610401 GOLGA8MH3BSY2 632 aa21.85■■□□□ 1.09
SSBP3-216ENST00000610401 SNX3O60493 162 aa21.85■■□□□ 1.09
SSBP3-216ENST00000610401 POLR2MP0CAP2 368 aa21.85■■□□□ 1.09
SSBP3-216ENST00000610401 PEX5P50542 639 aa21.85■■□□□ 1.09
SSBP3-216ENST00000610401 BMT2Q1RMZ1 405 aa21.85■■□□□ 1.09
SSBP3-216ENST00000610401 TAOK1Q7L7X3 1001 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms