RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 MCM8Q9UJA3 840 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 ATP11BQ9Y2G3 1177 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 PNPLA7Q6ZV29 1317 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 EEF1B2P24534 225 aaKnown RBP9.69□□□□□ -0.86
COL25A1-208ENST00000610288 KRT17Q04695 432 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 TBX2Q13207 712 aaPredicted RBP9.69□□□□□ -0.86
COL25A1-208ENST00000610288 SPOUT1Q5T280 376 aaKnown RBP9.69□□□□□ -0.86
COL25A1-208ENST00000610288 GJC2Q5T442 439 aaPredicted RBP9.69□□□□□ -0.86
COL25A1-208ENST00000610288 CDKAL1Q5VV42 579 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 MIS18BP1Q6P0N0 1132 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 FOXR1Q6PIV2 292 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 MIGA2Q7L4E1 593 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 DDX42Q86XP3 938 aaKnown RBP eCLIP9.69□□□□□ -0.86
COL25A1-208ENST00000610288 LRRC34Q8IZ02 419 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 THAP11Q96EK4 314 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 TMEM47Q9BQJ4 181 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 PABPC3Q9H361 631 aaKnown RBP9.69□□□□□ -0.86
COL25A1-208ENST00000610288 MINPP1Q9UNW1 487 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 C15orf41Q9Y2V0 281 aa9.69□□□□□ -0.86
COL25A1-208ENST00000610288 RPS6KA4O75676 772 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 EIF2AK2P19525 551 aaKnown RBP9.68□□□□□ -0.86
COL25A1-208ENST00000610288 SAT1P21673 171 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 KLRC1P26715 233 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 CTTNQ14247 550 aaKnown RBP9.68□□□□□ -0.86
COL25A1-208ENST00000610288 MTERF2Q49AM1 385 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 YTHDF3Q7Z739 585 aaKnown RBP9.68□□□□□ -0.86
COL25A1-208ENST00000610288 ATL2Q8NHH9 583 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 SLC26A7Q8TE54 656 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 ALKBH8Q96BT7 664 aaKnown RBP9.68□□□□□ -0.86
COL25A1-208ENST00000610288 CALN1Q9BXU9 219 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 RANBP17Q9H2T7 1088 aaKnown RBP9.68□□□□□ -0.86
COL25A1-208ENST00000610288 CPVLQ9H3G5 476 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 A1CFQ9NQ94 594 aaKnown RBP9.68□□□□□ -0.86
COL25A1-208ENST00000610288 SUCLA2Q9P2R7 463 aaPredicted RBP9.68□□□□□ -0.86
COL25A1-208ENST00000610288 TLK1Q9UKI8 766 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 AKT3Q9Y243 479 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 LZTS1Q9Y250 596 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 CHRM1P11229 460 aaPredicted RBP9.68□□□□□ -0.86
COL25A1-208ENST00000610288 ITKQ08881 620 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 HIC1Q14526 733 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 GRM4Q14833 912 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 RAPH1Q70E73 1250 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 DPP9Q86TI2 863 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 FAM160B2Q86V87 743 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 DTX3LQ8TDB6 740 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 GJD4Q96KN9 370 aaPredicted RBP9.68□□□□□ -0.86
COL25A1-208ENST00000610288 NUP85Q9BW27 656 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 HEMGNQ9BXL5 484 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 EHD2Q9NZN4 543 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 HPS5Q9UPZ3 1129 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 RNF17Q9BXT8 1623 aaKnown RBP9.68□□□□□ -0.86
COL25A1-208ENST00000610288 O00370 1275 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 XPOTO43592 962 aaKnown RBP9.68□□□□□ -0.86
COL25A1-208ENST00000610288 ORC4O43929 436 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 LPXNO60711 386 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 PYGBP11216 843 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 NPR1P16066 1061 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 GALCP54803 685 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 SNAP25P60880 206 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 STK4Q13043 487 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 AP3B2Q13367 1082 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 RIBC1Q8N443 379 aaPredicted RBP9.68□□□□□ -0.86
COL25A1-208ENST00000610288 ADAM22Q9P0K1 906 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 NXF1Q9UBU9 619 aaKnown RBP9.68□□□□□ -0.86
COL25A1-208ENST00000610288 SEL1LQ9UBV2 794 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 DBR1Q9UK59 544 aaKnown RBP9.68□□□□□ -0.86
COL25A1-208ENST00000610288 BAG5Q9UL15 447 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 TULP4Q9NRJ4 1543 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 FAM205CA6NFA0 338 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 SUPT3HO75486 399 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 CCNA1P78396 465 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 PDIA5Q14554 519 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 SUPT20HL1Q3ZLR7 823 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 TMEM179Q6ZVK1 233 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 ATG9AQ7Z3C6 839 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 TTLL6Q8N841 843 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 ARL10Q8N8L6 244 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 CFAP36Q96G28 342 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 FAM192AQ9GZU8 254 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 GID8Q9NWU2 228 aa9.68□□□□□ -0.86
COL25A1-208ENST00000610288 USP17L5A8MUK1 530 aa9.67□□□□□ -0.86
COL25A1-208ENST00000610288 DAB1O75553 588 aa9.67□□□□□ -0.86
COL25A1-208ENST00000610288 ATP6V1G2O95670 118 aa9.67□□□□□ -0.86
COL25A1-208ENST00000610288 HSPA4LO95757 839 aa9.67□□□□□ -0.86
COL25A1-208ENST00000610288 GH2P01242 217 aa9.67□□□□□ -0.86
COL25A1-208ENST00000610288 MLH1P40692 756 aa9.67□□□□□ -0.86
COL25A1-208ENST00000610288 CACNB3P54284 484 aa9.67□□□□□ -0.86
COL25A1-208ENST00000610288 DDR1Q08345 913 aa9.67□□□□□ -0.86
COL25A1-208ENST00000610288 PPP1R18Q6NYC8 613 aa9.67□□□□□ -0.86
COL25A1-208ENST00000610288 KIRREL3Q8IZU9 778 aa9.67□□□□□ -0.86
COL25A1-208ENST00000610288 RPS6KC1Q96S38 1066 aa9.67□□□□□ -0.86
COL25A1-208ENST00000610288 LACRTQ9GZZ8 138 aa9.67□□□□□ -0.86
COL25A1-208ENST00000610288 DCP1AQ9NPI6 582 aaPredicted RBP9.67□□□□□ -0.86
COL25A1-208ENST00000610288 ABCB11O95342 1321 aa9.67□□□□□ -0.86
COL25A1-208ENST00000610288 E9PMD0 336 aa9.67□□□□□ -0.86
COL25A1-208ENST00000610288 PDXKO00764 312 aa9.67□□□□□ -0.86
COL25A1-208ENST00000610288 CCND2P30279 289 aa9.67□□□□□ -0.86
COL25A1-208ENST00000610288 SLC29A2Q14542 456 aa9.67□□□□□ -0.86
COL25A1-208ENST00000610288 LONRF1Q17RB8 773 aa9.67□□□□□ -0.86
COL25A1-208ENST00000610288 RHOT1Q8IXI2 618 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms