RNA–Protein interactions for RNA: ENST00000609959.1

CCDC144B-206, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 5

Gene CCDC144B, Length 808 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-206ENST00000609959 CCDC178Q5BJE1 867 aa4.71□□□□□ -1.66
CCDC144B-206ENST00000609959 PIK3R6Q5UE93 754 aa4.71□□□□□ -1.66
CCDC144B-206ENST00000609959 LMBR1LQ6UX01 489 aa4.71□□□□□ -1.66
CCDC144B-206ENST00000609959 OR10H5Q8NGA6 315 aa4.71□□□□□ -1.66
CCDC144B-206ENST00000609959 CDC5LQ99459 802 aaKnown RBP4.71□□□□□ -1.66
CCDC144B-206ENST00000609959 ELF4Q99607 663 aaPredicted RBP4.71□□□□□ -1.66
CCDC144B-206ENST00000609959 TOMM22Q9NS69 142 aa4.71□□□□□ -1.66
CCDC144B-206ENST00000609959 MAST3O60307 1309 aa4.71□□□□□ -1.66
CCDC144B-206ENST00000609959 PPP1R12AO14974 1030 aaPredicted RBP4.7□□□□□ -1.66
CCDC144B-206ENST00000609959 ITGAMP11215 1152 aa4.7□□□□□ -1.66
CCDC144B-206ENST00000609959 CD40P25942 277 aa4.7□□□□□ -1.66
CCDC144B-206ENST00000609959 PLA2G5P39877 138 aa4.7□□□□□ -1.66
CCDC144B-206ENST00000609959 MPLP40238 635 aa4.7□□□□□ -1.66
CCDC144B-206ENST00000609959 GPR15P49685 360 aa4.7□□□□□ -1.66
CCDC144B-206ENST00000609959 RESTQ13127 1097 aa4.7□□□□□ -1.66
CCDC144B-206ENST00000609959 SF3A1Q15459 793 aaKnown RBP4.7□□□□□ -1.66
CCDC144B-206ENST00000609959 PDCD4Q53EL6 469 aaKnown RBP4.7□□□□□ -1.66
CCDC144B-206ENST00000609959 UNQ6494/PRO21346Q6UXR6 183 aa4.7□□□□□ -1.66
CCDC144B-206ENST00000609959 PASD1Q8IV76 773 aa4.7□□□□□ -1.66
CCDC144B-206ENST00000609959 SRRM1Q8IYB3 904 aaKnown RBP4.7□□□□□ -1.66
CCDC144B-206ENST00000609959 ZNF384Q8TF68 577 aa4.7□□□□□ -1.66
CCDC144B-206ENST00000609959 SCARB1Q8WTV0 552 aa4.7□□□□□ -1.66
CCDC144B-206ENST00000609959 RTF1Q92541 710 aaKnown RBP4.7□□□□□ -1.66
CCDC144B-206ENST00000609959 SLC29A3Q9BZD2 475 aa4.7□□□□□ -1.66
CCDC144B-206ENST00000609959 IKBKBO14920 756 aa4.69□□□□□ -1.66
CCDC144B-206ENST00000609959 CDKL5O76039 1030 aa4.69□□□□□ -1.66
CCDC144B-206ENST00000609959 SPDEFO95238 335 aa4.69□□□□□ -1.66
CCDC144B-206ENST00000609959 JMJD7P0C870 316 aa4.69□□□□□ -1.66
CCDC144B-206ENST00000609959 FDXRP22570 491 aa4.69□□□□□ -1.66
CCDC144B-206ENST00000609959 FOXF2Q12947 444 aa4.69□□□□□ -1.66
CCDC144B-206ENST00000609959 CREB3L3Q68CJ9 461 aa4.69□□□□□ -1.66
CCDC144B-206ENST00000609959 CDCA2Q69YH5 1023 aaPredicted RBP4.69□□□□□ -1.66
CCDC144B-206ENST00000609959 ESRP1Q6NXG1 681 aaKnown RBP4.69□□□□□ -1.66
CCDC144B-206ENST00000609959 ESPNLQ6ZVH7 1005 aa4.69□□□□□ -1.66
CCDC144B-206ENST00000609959 PDZD4Q76G19 769 aaPredicted RBP4.69□□□□□ -1.66
CCDC144B-206ENST00000609959 SLC44A3Q8N4M1 653 aa4.69□□□□□ -1.66
CCDC144B-206ENST00000609959 ZFP28Q8NHY6 868 aa4.69□□□□□ -1.66
CCDC144B-206ENST00000609959 SH3TC2Q8TF17 1288 aa4.69□□□□□ -1.66
CCDC144B-206ENST00000609959 ASB10Q8WXI3 467 aa4.69□□□□□ -1.66
CCDC144B-206ENST00000609959 FERMT2Q96AC1 680 aa4.69□□□□□ -1.66
CCDC144B-206ENST00000609959 RNF7Q9UBF6 113 aa4.69□□□□□ -1.66
CCDC144B-206ENST00000609959 ATP11BQ9Y2G3 1177 aa4.69□□□□□ -1.66
CCDC144B-206ENST00000609959 ZKSCAN5Q9Y2L8 839 aa4.69□□□□□ -1.66
CCDC144B-206ENST00000609959 TBKBP1A7MCY6 615 aa4.68□□□□□ -1.66
CCDC144B-206ENST00000609959 CBX4O00257 560 aa4.68□□□□□ -1.66
CCDC144B-206ENST00000609959 ABCG1P45844 678 aa4.68□□□□□ -1.66
CCDC144B-206ENST00000609959 GAB3Q8WWW8 586 aa4.68□□□□□ -1.66
CCDC144B-206ENST00000609959 TFAP2CQ92754 450 aa4.68□□□□□ -1.66
CCDC144B-206ENST00000609959 ADAM2Q99965 735 aa4.68□□□□□ -1.66
CCDC144B-206ENST00000609959 KMT5AQ9NQR1 393 aa4.68□□□□□ -1.66
CCDC144B-206ENST00000609959 SEMA4GQ9NTN9 838 aa4.68□□□□□ -1.66
CCDC144B-206ENST00000609959 USP18Q9UMW8 372 aa4.68□□□□□ -1.66
CCDC144B-206ENST00000609959 USP15Q9Y4E8 981 aaPredicted RBP4.68□□□□□ -1.66
CCDC144B-206ENST00000609959 NOX1Q9Y5S8 564 aa4.68□□□□□ -1.66
CCDC144B-206ENST00000609959 SEC24DO94855 1032 aaPredicted RBP4.67□□□□□ -1.66
CCDC144B-206ENST00000609959 ASMTLO95671 621 aa4.67□□□□□ -1.66
CCDC144B-206ENST00000609959 RARRES1P49788 294 aa4.67□□□□□ -1.66
CCDC144B-206ENST00000609959 PABPC4Q13310 644 aaKnown RBP eCLIP4.67□□□□□ -1.66
CCDC144B-206ENST00000609959 LRRC32Q14392 662 aa4.67□□□□□ -1.66
CCDC144B-206ENST00000609959 ZNF169Q14929 603 aaPredicted RBP4.67□□□□□ -1.66
CCDC144B-206ENST00000609959 NFE2L2Q16236 605 aa4.67□□□□□ -1.66
CCDC144B-206ENST00000609959 ARHGEF25Q86VW2 580 aa4.67□□□□□ -1.66
CCDC144B-206ENST00000609959 SYT12Q8IV01 421 aa4.67□□□□□ -1.66
CCDC144B-206ENST00000609959 GLB1L2Q8IW92 636 aa4.67□□□□□ -1.66
CCDC144B-206ENST00000609959 ANKS1AQ92625 1134 aa4.67□□□□□ -1.66
CCDC144B-206ENST00000609959 TEX101Q9BY14 249 aa4.67□□□□□ -1.66
CCDC144B-206ENST00000609959 IFT57Q9NWB7 429 aa4.67□□□□□ -1.66
CCDC144B-206ENST00000609959 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.67□□□□□ -1.66
CCDC144B-206ENST00000609959 H2AFY2Q9P0M6 372 aaPredicted RBP4.67□□□□□ -1.66
CCDC144B-206ENST00000609959 LRIT1Q9P2V4 623 aa4.67□□□□□ -1.66
CCDC144B-206ENST00000609959 MAP3K2Q9Y2U5 619 aa4.67□□□□□ -1.66
CCDC144B-206ENST00000609959 PROP1O75360 226 aa4.66□□□□□ -1.66
CCDC144B-206ENST00000609959 RBMXL2O75526 392 aaKnown RBP4.66□□□□□ -1.66
CCDC144B-206ENST00000609959 CFIP05156 583 aa4.66□□□□□ -1.66
CCDC144B-206ENST00000609959 CACNA2D1P54289 1103 aa4.66□□□□□ -1.66
CCDC144B-206ENST00000609959 MGAT5Q09328 741 aa4.66□□□□□ -1.66
CCDC144B-206ENST00000609959 MAPK7Q13164 816 aa4.66□□□□□ -1.66
CCDC144B-206ENST00000609959 BMT2Q1RMZ1 405 aa4.66□□□□□ -1.66
CCDC144B-206ENST00000609959 FAM102AQ5T9C2 384 aaPredicted RBP4.66□□□□□ -1.66
CCDC144B-206ENST00000609959 SREK1Q8WXA9 508 aaKnown RBP4.66□□□□□ -1.66
CCDC144B-206ENST00000609959 RSAD2Q8WXG1 361 aa4.66□□□□□ -1.66
CCDC144B-206ENST00000609959 MRFAP1L1Q96HT8 127 aa4.66□□□□□ -1.66
CCDC144B-206ENST00000609959 HEPHQ9BQS7 1158 aa4.66□□□□□ -1.66
CCDC144B-206ENST00000609959 REXO4Q9GZR2 422 aaKnown RBP4.66□□□□□ -1.66
CCDC144B-206ENST00000609959 OXSMQ9NWU1 459 aa4.66□□□□□ -1.66
CCDC144B-206ENST00000609959 TMEM260Q9NX78 707 aa4.66□□□□□ -1.66
CCDC144B-206ENST00000609959 A0A1W2PR48 441 aa4.65□□□□□ -1.67
CCDC144B-206ENST00000609959 FAM83GA6ND36 823 aa4.65□□□□□ -1.67
CCDC144B-206ENST00000609959 DNAJC9-AS1A6NH13 148 aa4.65□□□□□ -1.67
CCDC144B-206ENST00000609959 MARCH11A6NNE9 402 aa4.65□□□□□ -1.67
CCDC144B-206ENST00000609959 LTA4HP09960 611 aaKnown RBP4.65□□□□□ -1.67
CCDC144B-206ENST00000609959 ATP2A2P16615 1042 aaKnown RBP4.65□□□□□ -1.67
CCDC144B-206ENST00000609959 SIM1P81133 766 aaPredicted RBP4.65□□□□□ -1.67
CCDC144B-206ENST00000609959 MEF2AQ02078 507 aaPredicted RBP4.65□□□□□ -1.67
CCDC144B-206ENST00000609959 UBE3CQ15386 1083 aa4.65□□□□□ -1.67
CCDC144B-206ENST00000609959 C21orf62-AS1Q17RA5 79 aa4.65□□□□□ -1.67
CCDC144B-206ENST00000609959 CFAP100Q494V2 611 aa4.65□□□□□ -1.67
CCDC144B-206ENST00000609959 BTNL9Q6UXG8 535 aa4.65□□□□□ -1.67
CCDC144B-206ENST00000609959 Q6ZNX1 250 aa4.65□□□□□ -1.67
CCDC144B-206ENST00000609959 NPM2Q86SE8 214 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms