RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 IFT74Q96LB3 600 aa11.02□□□□□ -0.65
CTSA-215ENST00000607187 ZNF558Q96NG5 402 aa11.02□□□□□ -0.65
CTSA-215ENST00000607187 ASB2Q96Q27 587 aa11.02□□□□□ -0.65
CTSA-215ENST00000607187 RUSC1Q9BVN2 902 aa11.02□□□□□ -0.65
CTSA-215ENST00000607187 EIF2AQ9BY44 585 aaKnown RBP11.02□□□□□ -0.65
CTSA-215ENST00000607187 CCDC113Q9H0I3 377 aa11.02□□□□□ -0.65
CTSA-215ENST00000607187 CSRNP2Q9H175 543 aa11.02□□□□□ -0.65
CTSA-215ENST00000607187 ZSCAN16Q9H4T2 348 aaPredicted RBP11.02□□□□□ -0.65
CTSA-215ENST00000607187 ALG2Q9H553 416 aa11.02□□□□□ -0.65
CTSA-215ENST00000607187 POLD4Q9HCU8 107 aa11.02□□□□□ -0.65
CTSA-215ENST00000607187 PRMT7Q9NVM4 692 aaPredicted RBP11.02□□□□□ -0.65
CTSA-215ENST00000607187 IPPQ9Y573 584 aa11.02□□□□□ -0.65
CTSA-215ENST00000607187 CNTNAP2Q9UHC6 1331 aa11.02□□□□□ -0.65
CTSA-215ENST00000607187 PPP1R3GB7ZBB8 358 aa11.01□□□□□ -0.65
CTSA-215ENST00000607187 GUCY2CP25092 1073 aa11.01□□□□□ -0.65
CTSA-215ENST00000607187 PPM1AP35813 382 aa11.01□□□□□ -0.65
CTSA-215ENST00000607187 UBA7P41226 1012 aa11.01□□□□□ -0.65
CTSA-215ENST00000607187 PLCB3Q01970 1234 aa11.01□□□□□ -0.65
CTSA-215ENST00000607187 MAPK7Q13164 816 aa11.01□□□□□ -0.65
CTSA-215ENST00000607187 MAPK6Q16659 721 aa11.01□□□□□ -0.65
CTSA-215ENST00000607187 AAK1Q2M2I8 961 aa11.01□□□□□ -0.65
CTSA-215ENST00000607187 THNSL1Q8IYQ7 743 aa11.01□□□□□ -0.65
CTSA-215ENST00000607187 DAW1Q8N136 415 aa11.01□□□□□ -0.65
CTSA-215ENST00000607187 DEPTORQ8TB45 409 aa11.01□□□□□ -0.65
CTSA-215ENST00000607187 CALML4Q96GE6 196 aa11.01□□□□□ -0.65
CTSA-215ENST00000607187 CDK5RAP3Q96JB5 506 aa11.01□□□□□ -0.65
CTSA-215ENST00000607187 DRC1Q96MC2 740 aa11.01□□□□□ -0.65
CTSA-215ENST00000607187 PLIN2Q99541 437 aa11.01□□□□□ -0.65
CTSA-215ENST00000607187 TIPINQ9BVW5 301 aa11.01□□□□□ -0.65
CTSA-215ENST00000607187 COL25A1Q9BXS0 654 aaPredicted RBP11.01□□□□□ -0.65
CTSA-215ENST00000607187 RSAD1Q9HA92 442 aa11.01□□□□□ -0.65
CTSA-215ENST00000607187 TBC1D13Q9NVG8 400 aa11.01□□□□□ -0.65
CTSA-215ENST00000607187 KCND2Q9NZV8 630 aa11.01□□□□□ -0.65
CTSA-215ENST00000607187 PCDHGC3Q9UN70 934 aa11.01□□□□□ -0.65
CTSA-215ENST00000607187 LZTS1Q9Y250 596 aa11.01□□□□□ -0.65
CTSA-215ENST00000607187 MORC2Q9Y6X9 1032 aaPredicted RBP11.01□□□□□ -0.65
CTSA-215ENST00000607187 CITO14578 2027 aa11.01□□□□□ -0.65
CTSA-215ENST00000607187 DLL1O00548 723 aa11□□□□□ -0.65
CTSA-215ENST00000607187 ACKR2O00590 384 aa11□□□□□ -0.65
CTSA-215ENST00000607187 INPPL1O15357 1258 aa11□□□□□ -0.65
CTSA-215ENST00000607187 NCK2O43639 380 aa11□□□□□ -0.65
CTSA-215ENST00000607187 HIP1RO75146 1068 aa11□□□□□ -0.65
CTSA-215ENST00000607187 PRKCBP05771 671 aa11□□□□□ -0.65
CTSA-215ENST00000607187 HSP90AA1P07900 732 aaKnown RBP11□□□□□ -0.65
CTSA-215ENST00000607187 PLA2G4BP0C869 781 aa11□□□□□ -0.65
CTSA-215ENST00000607187 ITGA4P13612 1032 aa11□□□□□ -0.65
CTSA-215ENST00000607187 MARCKSP29966 332 aaPredicted RBP11□□□□□ -0.65
CTSA-215ENST00000607187 IRS1P35568 1242 aa11□□□□□ -0.65
CTSA-215ENST00000607187 PBX3P40426 434 aa11□□□□□ -0.65
CTSA-215ENST00000607187 GCGRP47871 477 aa11□□□□□ -0.65
CTSA-215ENST00000607187 NPTX2P47972 431 aa11□□□□□ -0.65
CTSA-215ENST00000607187 ALDH7A1P49419 539 aaKnown RBP11□□□□□ -0.65
CTSA-215ENST00000607187 EFNA5P52803 228 aa11□□□□□ -0.65
CTSA-215ENST00000607187 PEX3P56589 373 aa11□□□□□ -0.65
CTSA-215ENST00000607187 BCAR1P56945 870 aa11□□□□□ -0.65
CTSA-215ENST00000607187 DMP1Q13316 513 aaPredicted RBP11□□□□□ -0.65
CTSA-215ENST00000607187 PRPF4BQ13523 1007 aaKnown RBP11□□□□□ -0.65
CTSA-215ENST00000607187 SLC27A1Q6PCB7 646 aa11□□□□□ -0.65
CTSA-215ENST00000607187 CDR2LQ86X02 465 aaPredicted RBP11□□□□□ -0.65
CTSA-215ENST00000607187 SLC39A11Q8N1S5 342 aa11□□□□□ -0.65
CTSA-215ENST00000607187 MRPS27Q92552 414 aaKnown RBP11□□□□□ -0.65
CTSA-215ENST00000607187 PABPC5Q96DU9 382 aaKnown RBP11□□□□□ -0.65
CTSA-215ENST00000607187 USP28Q96RU2 1077 aa11□□□□□ -0.65
CTSA-215ENST00000607187 KIFC3Q9BVG8 833 aa11□□□□□ -0.65
CTSA-215ENST00000607187 TRIM6Q9C030 488 aaPredicted RBP11□□□□□ -0.65
CTSA-215ENST00000607187 CCSER1Q9C0I3 900 aa11□□□□□ -0.65
CTSA-215ENST00000607187 NXF3Q9H4D5 531 aaKnown RBP11□□□□□ -0.65
CTSA-215ENST00000607187 NRDE2Q9H7Z3 1164 aa11□□□□□ -0.65
CTSA-215ENST00000607187 UBE2ZQ9H832 354 aaPredicted RBP11□□□□□ -0.65
CTSA-215ENST00000607187 C17orf75Q9HAS0 396 aa11□□□□□ -0.65
CTSA-215ENST00000607187 UBN1Q9NPG3 1134 aa11□□□□□ -0.65
CTSA-215ENST00000607187 TLR9Q9NR96 1032 aa11□□□□□ -0.65
CTSA-215ENST00000607187 SPG21Q9NZD8 308 aa11□□□□□ -0.65
CTSA-215ENST00000607187 KANSL3Q9P2N6 904 aa11□□□□□ -0.65
CTSA-215ENST00000607187 FBXO2Q9UK22 296 aaPredicted RBP11□□□□□ -0.65
CTSA-215ENST00000607187 INPP5FQ9Y2H2 1132 aa11□□□□□ -0.65
CTSA-215ENST00000607187 HES2Q9Y543 173 aa11□□□□□ -0.65
CTSA-215ENST00000607187 SRPRBQ9Y5M8 271 aaKnown RBP11□□□□□ -0.65
CTSA-215ENST00000607187 ARL5CA6NH57 179 aa10.99□□□□□ -0.65
CTSA-215ENST00000607187 FSCN2O14926 492 aa10.99□□□□□ -0.65
CTSA-215ENST00000607187 N4BP3O15049 544 aa10.99□□□□□ -0.65
CTSA-215ENST00000607187 B4GALT3O60512 393 aa10.99□□□□□ -0.65
CTSA-215ENST00000607187 ZC3H11AO75152 810 aaKnown RBP eCLIP10.99□□□□□ -0.65
CTSA-215ENST00000607187 CSPG5O95196 566 aa10.99□□□□□ -0.65
CTSA-215ENST00000607187 NPTXRO95502 500 aa10.99□□□□□ -0.65
CTSA-215ENST00000607187 EDN1P05305 212 aa10.99□□□□□ -0.65
CTSA-215ENST00000607187 SSBP05455 408 aaKnown RBP eCLIP10.99□□□□□ -0.65
CTSA-215ENST00000607187 BMP1P13497 986 aa10.99□□□□□ -0.65
CTSA-215ENST00000607187 KCNQ1P51787 676 aa10.99□□□□□ -0.65
CTSA-215ENST00000607187 AFF1P51825 1210 aaKnown RBP10.99□□□□□ -0.65
CTSA-215ENST00000607187 ERVFC1P60507 584 aa10.99□□□□□ -0.65
CTSA-215ENST00000607187 CEBPZQ03701 1054 aaKnown RBP10.99□□□□□ -0.65
CTSA-215ENST00000607187 KRT17Q04695 432 aa10.99□□□□□ -0.65
CTSA-215ENST00000607187 RNASELQ05823 741 aaKnown RBP10.99□□□□□ -0.65
CTSA-215ENST00000607187 HYAL1Q12794 435 aa10.99□□□□□ -0.65
CTSA-215ENST00000607187 SLC39A14Q15043 492 aa10.99□□□□□ -0.65
CTSA-215ENST00000607187 KARSQ15046 597 aaKnown RBP10.99□□□□□ -0.65
CTSA-215ENST00000607187 CTC1Q2NKJ3 1217 aa10.99□□□□□ -0.65
CTSA-215ENST00000607187 ARSHQ5FYA8 562 aa10.99□□□□□ -0.65
CTSA-215ENST00000607187 PDE12Q6L8Q7 609 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms