RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 SPAG5Q96R06 1193 aa23.43■■□□□ 1.34
USP6NL-204ENST00000606752 TCHPQ9BT92 498 aa23.43■■□□□ 1.34
USP6NL-204ENST00000606752 EVPLQ92817 2033 aa23.43■■□□□ 1.34
USP6NL-204ENST00000606752 A0A087WZ62 844 aa23.43■■□□□ 1.34
USP6NL-204ENST00000606752 VTNP04004 478 aa23.43■■□□□ 1.34
USP6NL-204ENST00000606752 ACOT2P49753 483 aa23.43■■□□□ 1.34
USP6NL-204ENST00000606752 PSMD6Q15008 389 aa23.43■■□□□ 1.34
USP6NL-204ENST00000606752 KRT39Q6A163 491 aa23.43■■□□□ 1.34
USP6NL-204ENST00000606752 TSHZ1Q6ZSZ6 1077 aa23.43■■□□□ 1.34
USP6NL-204ENST00000606752 POP1Q99575 1024 aaKnown RBP23.43■■□□□ 1.34
USP6NL-204ENST00000606752 FDXACB1Q9BRP7 624 aaPredicted RBP23.43■■□□□ 1.34
USP6NL-204ENST00000606752 KATNAL1Q9BW62 490 aa23.43■■□□□ 1.34
USP6NL-204ENST00000606752 MINDY3Q9H8M7 445 aa23.43■■□□□ 1.34
USP6NL-204ENST00000606752 TMEM8AQ9HCN3 771 aa23.43■■□□□ 1.34
USP6NL-204ENST00000606752 PRMT7Q9NVM4 692 aaPredicted RBP23.43■■□□□ 1.34
USP6NL-204ENST00000606752 KPNA6O60684 536 aa23.42■■□□□ 1.34
USP6NL-204ENST00000606752 TUBB4AP04350 444 aa23.42■■□□□ 1.34
USP6NL-204ENST00000606752 HOXD10P28358 340 aa23.42■■□□□ 1.34
USP6NL-204ENST00000606752 GJA9P57773 515 aa23.42■■□□□ 1.34
USP6NL-204ENST00000606752 PRPF4BQ13523 1007 aaKnown RBP23.42■■□□□ 1.34
USP6NL-204ENST00000606752 RAPGEF1Q13905 1077 aa23.42■■□□□ 1.34
USP6NL-204ENST00000606752 FAM187BQ17R55 369 aa23.42■■□□□ 1.34
USP6NL-204ENST00000606752 EPC2Q52LR7 807 aa23.42■■□□□ 1.34
USP6NL-204ENST00000606752 ACRBPQ8NEB7 543 aa23.42■■□□□ 1.34
USP6NL-204ENST00000606752 ZSWIM8A7E2V4 1837 aa23.41■■□□□ 1.34
USP6NL-204ENST00000606752 MBLAC1A4D2B0 266 aaPredicted RBP23.41■■□□□ 1.34
USP6NL-204ENST00000606752 EIF3CLB5ME19 914 aaKnown RBP23.41■■□□□ 1.34
USP6NL-204ENST00000606752 TULP1O00294 542 aaPredicted RBP23.41■■□□□ 1.34
USP6NL-204ENST00000606752 SEPT4O43236 478 aa23.41■■□□□ 1.34
USP6NL-204ENST00000606752 SERPING1P05155 500 aa23.41■■□□□ 1.34
USP6NL-204ENST00000606752 DLATP10515 647 aaKnown RBP23.41■■□□□ 1.34
USP6NL-204ENST00000606752 VEGFBP49765 207 aa23.41■■□□□ 1.34
USP6NL-204ENST00000606752 CLDN10P78369 228 aa23.41■■□□□ 1.34
USP6NL-204ENST00000606752 MCL1Q07820 350 aa23.41■■□□□ 1.34
USP6NL-204ENST00000606752 CACNB2Q08289 660 aaPredicted RBP23.41■■□□□ 1.34
USP6NL-204ENST00000606752 SLC9C1Q4G0N8 1177 aa23.41■■□□□ 1.34
USP6NL-204ENST00000606752 HGSNATQ68CP4 663 aa23.41■■□□□ 1.34
USP6NL-204ENST00000606752 IQCEQ6IPM2 695 aa23.41■■□□□ 1.34
USP6NL-204ENST00000606752 EIF3CQ99613 913 aaKnown RBP23.41■■□□□ 1.34
USP6NL-204ENST00000606752 APEX2Q9UBZ4 518 aa23.41■■□□□ 1.34
USP6NL-204ENST00000606752 COQ4Q9Y3A0 265 aa23.41■■□□□ 1.34
USP6NL-204ENST00000606752 SSU72P8A0A1W2PR75 194 aa23.4■■□□□ 1.34
USP6NL-204ENST00000606752 ZEB2O60315 1214 aa23.4■■□□□ 1.34
USP6NL-204ENST00000606752 PLEKP08567 350 aaPredicted RBP23.4■■□□□ 1.34
USP6NL-204ENST00000606752 C6orf222P0C671 652 aaPredicted RBP23.4■■□□□ 1.34
USP6NL-204ENST00000606752 PROZP22891 400 aa23.4■■□□□ 1.34
USP6NL-204ENST00000606752 KRT83P78385 493 aa23.4■■□□□ 1.34
USP6NL-204ENST00000606752 PURAQ00577 322 aaKnown RBP23.4■■□□□ 1.34
USP6NL-204ENST00000606752 CDC42EP1Q00587 391 aa23.4■■□□□ 1.34
USP6NL-204ENST00000606752 MAPK8IP2Q13387 824 aaPredicted RBP23.4■■□□□ 1.34
USP6NL-204ENST00000606752 ATF7IP2Q5U623 682 aa23.4■■□□□ 1.34
USP6NL-204ENST00000606752 GJB7Q6PEY0 223 aa23.4■■□□□ 1.34
USP6NL-204ENST00000606752 FNBP1Q96RU3 617 aa23.4■■□□□ 1.34
USP6NL-204ENST00000606752 PTPRHQ9HD43 1115 aa23.4■■□□□ 1.34
USP6NL-204ENST00000606752 RBAKQ9NYW8 714 aaPredicted RBP23.4■■□□□ 1.34
USP6NL-204ENST00000606752 SRRDQ9UH36 339 aa23.4■■□□□ 1.34
USP6NL-204ENST00000606752 ABLIM1O14639 778 aa23.4■■□□□ 1.34
USP6NL-204ENST00000606752 IQCF3P0C7M6 154 aa23.4■■□□□ 1.34
USP6NL-204ENST00000606752 RFX1P22670 979 aa23.4■■□□□ 1.34
USP6NL-204ENST00000606752 EIF4A3P38919 411 aaKnown RBP23.4■■□□□ 1.34
USP6NL-204ENST00000606752 JAM2P57087 298 aa23.4■■□□□ 1.34
USP6NL-204ENST00000606752 MAP2K1Q02750 393 aaPredicted RBP23.4■■□□□ 1.34
USP6NL-204ENST00000606752 TRIM32Q13049 653 aa23.4■■□□□ 1.34
USP6NL-204ENST00000606752 ASIC2Q16515 512 aa23.4■■□□□ 1.34
USP6NL-204ENST00000606752 MPZL3Q6UWV2 235 aa23.4■■□□□ 1.34
USP6NL-204ENST00000606752 ZBTB33Q86T24 672 aa23.4■■□□□ 1.34
USP6NL-204ENST00000606752 ZNF410Q86VK4 478 aa23.4■■□□□ 1.34
USP6NL-204ENST00000606752 NLRP7Q8WX94 980 aa23.4■■□□□ 1.34
USP6NL-204ENST00000606752 STK33Q9BYT3 514 aa23.4■■□□□ 1.34
USP6NL-204ENST00000606752 SPC25Q9HBM1 224 aa23.4■■□□□ 1.34
USP6NL-204ENST00000606752 DNAJC12Q9UKB3 198 aa23.4■■□□□ 1.34
USP6NL-204ENST00000606752 AJAP1Q9UKB5 411 aaPredicted RBP23.4■■□□□ 1.34
USP6NL-204ENST00000606752 TNFSF13BQ9Y275 285 aa23.4■■□□□ 1.34
USP6NL-204ENST00000606752 SMIM35A0A1B0GVV1 85 aa23.39■■□□□ 1.33
USP6NL-204ENST00000606752 OGTO15294 1046 aa23.39■■□□□ 1.33
USP6NL-204ENST00000606752 B4GALT5O43286 388 aa23.39■■□□□ 1.33
USP6NL-204ENST00000606752 IPO7O95373 1038 aaKnown RBP23.39■■□□□ 1.33
USP6NL-204ENST00000606752 GPC3P51654 580 aa23.39■■□□□ 1.33
USP6NL-204ENST00000606752 ADAM17P78536 824 aa23.39■■□□□ 1.33
USP6NL-204ENST00000606752 GNASQ5JWF2 1037 aa23.39■■□□□ 1.33
USP6NL-204ENST00000606752 ZBTB41Q5SVQ8 909 aa23.39■■□□□ 1.33
USP6NL-204ENST00000606752 PHLDB3Q6NSJ2 640 aa23.39■■□□□ 1.33
USP6NL-204ENST00000606752 SV2AQ7L0J3 742 aa23.39■■□□□ 1.33
USP6NL-204ENST00000606752 PRIMPOLQ96LW4 560 aa23.39■■□□□ 1.33
USP6NL-204ENST00000606752 PPP1R16BQ96T49 567 aa23.39■■□□□ 1.33
USP6NL-204ENST00000606752 UPF3AQ9H1J1 476 aaKnown RBP23.39■■□□□ 1.33
USP6NL-204ENST00000606752 DEF6Q9H4E7 631 aa23.39■■□□□ 1.33
USP6NL-204ENST00000606752 TOPORSQ9NS56 1045 aaPredicted RBP23.39■■□□□ 1.33
USP6NL-204ENST00000606752 REXO2Q9Y3B8 237 aaKnown RBP23.39■■□□□ 1.33
USP6NL-204ENST00000606752 KAT6AQ92794 2004 aa23.39■■□□□ 1.33
USP6NL-204ENST00000606752 FAM189A1O60320 539 aa23.38■■□□□ 1.33
USP6NL-204ENST00000606752 RARBP10826 455 aa23.38■■□□□ 1.33
USP6NL-204ENST00000606752 HARSP12081 509 aaKnown RBP23.38■■□□□ 1.33
USP6NL-204ENST00000606752 NKX3-2P78367 333 aa23.38■■□□□ 1.33
USP6NL-204ENST00000606752 TMEM132AQ24JP5 1023 aa23.38■■□□□ 1.33
USP6NL-204ENST00000606752 CD99L2Q8TCZ2 262 aa23.38■■□□□ 1.33
USP6NL-204ENST00000606752 PDE11AQ9HCR9 933 aa23.38■■□□□ 1.33
USP6NL-204ENST00000606752 MYADML2A6NDP7 307 aa23.38■■□□□ 1.33
USP6NL-204ENST00000606752 KLHL30Q0D2K2 578 aa23.38■■□□□ 1.33
USP6NL-204ENST00000606752 AMHR2Q16671 573 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms